Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 RPS3AP43-201ENST00000479743 781 ntBASIC2.27□□□□□ -2.05
ZNF546Q86UE3 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
ZNF546Q86UE3 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC2.27□□□□□ -2.05
ZNF546Q86UE3 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.27□□□□□ -2.05
ZNF546Q86UE3 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.27□□□□□ -2.05
ZNF546Q86UE3 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.27□□□□□ -2.05
ZNF546Q86UE3 RNA5SP290-201ENST00000517133 127 ntBASIC2.27□□□□□ -2.05
ZNF546Q86UE3 RN7SKP258-201ENST00000517151 304 ntBASIC2.27□□□□□ -2.05
ZNF546Q86UE3 AC023632.4-201ENST00000517783 191 ntBASIC2.27□□□□□ -2.05
ZNF546Q86UE3 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC2.27□□□□□ -2.05
ZNF546Q86UE3 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC2.27□□□□□ -2.05
ZNF546Q86UE3 DEFB108A-201ENST00000530110 222 ntBASIC2.27□□□□□ -2.05
ZNF546Q86UE3 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
ZNF546Q86UE3 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.27□□□□□ -2.05
ZNF546Q86UE3 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC2.27□□□□□ -2.05
ZNF546Q86UE3 AL359212.1-201ENST00000556608 614 ntBASIC2.27□□□□□ -2.05
ZNF546Q86UE3 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC2.27□□□□□ -2.05
ZNF546Q86UE3 AC009097.3-201ENST00000563557 1018 ntBASIC2.27□□□□□ -2.05
ZNF546Q86UE3 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC2.27□□□□□ -2.05
ZNF546Q86UE3 ISCA1P3-201ENST00000577104 373 ntBASIC2.27□□□□□ -2.05
ZNF546Q86UE3 MIR4658-201ENST00000584344 65 ntBASIC2.27□□□□□ -2.05
ZNF546Q86UE3 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC2.27□□□□□ -2.05
ZNF546Q86UE3 AC234772.3-201ENST00000602277 528 ntBASIC2.27□□□□□ -2.05
ZNF546Q86UE3 AL355877.2-201ENST00000603670 358 ntBASIC2.27□□□□□ -2.05
ZNF546Q86UE3 AC103710.1-201ENST00000610003 901 ntBASIC2.27□□□□□ -2.05
ZNF546Q86UE3 AC008498.1-201ENST00000613012 531 ntBASIC2.27□□□□□ -2.05
ZNF546Q86UE3 AC034229.5-201ENST00000624258 185 ntBASIC2.27□□□□□ -2.05
ZNF546Q86UE3 AL136313.1-201ENST00000624804 202 ntBASIC2.27□□□□□ -2.05
ZNF546Q86UE3 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC2.27□□□□□ -2.05
ZNF546Q86UE3 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
ZNF546Q86UE3 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
ZNF546Q86UE3 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.26□□□□□ -2.05
ZNF546Q86UE3 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
ZNF546Q86UE3 RNY4P24-201ENST00000362735 96 ntBASIC2.26□□□□□ -2.05
ZNF546Q86UE3 Y_RNA.97-201ENST00000363094 102 ntBASIC2.26□□□□□ -2.05
ZNF546Q86UE3 RNU6-884P-201ENST00000363889 107 ntBASIC2.26□□□□□ -2.05
ZNF546Q86UE3 RNU6-660P-201ENST00000364566 109 ntBASIC2.26□□□□□ -2.05
ZNF546Q86UE3 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC2.26□□□□□ -2.05
ZNF546Q86UE3 U8.14-201ENST00000390843 143 ntBASIC2.26□□□□□ -2.05
ZNF546Q86UE3 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC2.26□□□□□ -2.05
ZNF546Q86UE3 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC2.26□□□□□ -2.05
ZNF546Q86UE3 RPL23AP39-201ENST00000415533 405 ntBASIC2.26□□□□□ -2.05
ZNF546Q86UE3 MTND2P9-201ENST00000422293 931 ntBASIC2.26□□□□□ -2.05
ZNF546Q86UE3 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.26□□□□□ -2.05
ZNF546Q86UE3 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC2.26□□□□□ -2.05
ZNF546Q86UE3 MTND1P28-201ENST00000435623 950 ntBASIC2.26□□□□□ -2.05
ZNF546Q86UE3 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC2.26□□□□□ -2.05
ZNF546Q86UE3 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC2.26□□□□□ -2.05
ZNF546Q86UE3 DPPA3P1-201ENST00000448050 469 ntBASIC2.26□□□□□ -2.05
ZNF546Q86UE3 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC2.26□□□□□ -2.05
ZNF546Q86UE3 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC2.26□□□□□ -2.05
ZNF546Q86UE3 AC108059.3-201ENST00000456388 214 ntBASIC2.26□□□□□ -2.05
ZNF546Q86UE3 RPL26P9-201ENST00000457466 433 ntBASIC2.26□□□□□ -2.05
ZNF546Q86UE3 MRPS17P3-201ENST00000465453 385 ntBASIC2.26□□□□□ -2.05
ZNF546Q86UE3 RN7SL293P-201ENST00000481765 281 ntBASIC2.26□□□□□ -2.05
ZNF546Q86UE3 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC2.26□□□□□ -2.05
ZNF546Q86UE3 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC2.26□□□□□ -2.05
ZNF546Q86UE3 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
ZNF546Q86UE3 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC2.26□□□□□ -2.05
ZNF546Q86UE3 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.26□□□□□ -2.05
ZNF546Q86UE3 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.26□□□□□ -2.05
ZNF546Q86UE3 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC2.26□□□□□ -2.05
ZNF546Q86UE3 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC2.26□□□□□ -2.05
ZNF546Q86UE3 AL356280.1-201ENST00000603614 379 ntBASIC2.26□□□□□ -2.05
ZNF546Q86UE3 MTND4LP5-201ENST00000605152 292 ntBASIC2.26□□□□□ -2.05
ZNF546Q86UE3 AC135507.1-201ENST00000607214 561 ntBASIC2.26□□□□□ -2.05
ZNF546Q86UE3 AC107214.2-201ENST00000608204 634 ntBASIC2.26□□□□□ -2.05
ZNF546Q86UE3 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC2.26□□□□□ -2.05
ZNF546Q86UE3 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC2.26□□□□□ -2.05
ZNF546Q86UE3 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC2.26□□□□□ -2.05
ZNF546Q86UE3 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.26□□□□□ -2.05
ZNF546Q86UE3 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
ZNF546Q86UE3 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.26□□□□□ -2.05
ZNF546Q86UE3 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
ZNF546Q86UE3 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.26□□□□□ -2.05
ZNF546Q86UE3 Y_RNA.46-201ENST00000362695 102 ntBASIC2.25□□□□□ -2.05
ZNF546Q86UE3 RNU6-1167P-201ENST00000363227 94 ntBASIC2.25□□□□□ -2.05
ZNF546Q86UE3 RNU6-1284P-201ENST00000363701 100 ntBASIC2.25□□□□□ -2.05
ZNF546Q86UE3 Y_RNA.245-201ENST00000364493 95 ntBASIC2.25□□□□□ -2.05
ZNF546Q86UE3 RNA5-8SP4-201ENST00000365096 150 ntBASIC2.25□□□□□ -2.05
ZNF546Q86UE3 ATP5F1P3-201ENST00000397213 657 ntBASIC2.25□□□□□ -2.05
ZNF546Q86UE3 AL139397.2-201ENST00000404529 772 ntBASIC2.25□□□□□ -2.05
ZNF546Q86UE3 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC2.25□□□□□ -2.05
ZNF546Q86UE3 HIGD1AP15-201ENST00000416198 280 ntBASIC2.25□□□□□ -2.05
ZNF546Q86UE3 USP9YP13-201ENST00000417797 480 ntBASIC2.25□□□□□ -2.05
ZNF546Q86UE3 BTF3L4P3-201ENST00000418879 476 ntBASIC2.25□□□□□ -2.05
ZNF546Q86UE3 DNAJA1P2-201ENST00000421360 1197 ntBASIC2.25□□□□□ -2.05
ZNF546Q86UE3 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC2.25□□□□□ -2.05
ZNF546Q86UE3 ELOCP14-201ENST00000428070 331 ntBASIC2.25□□□□□ -2.05
ZNF546Q86UE3 FCF1P1-201ENST00000432690 571 ntBASIC2.25□□□□□ -2.05
ZNF546Q86UE3 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC2.25□□□□□ -2.05
ZNF546Q86UE3 SNRPEP9-201ENST00000436794 238 ntBASIC2.25□□□□□ -2.05
ZNF546Q86UE3 ELOCP7-201ENST00000439968 331 ntBASIC2.25□□□□□ -2.05
ZNF546Q86UE3 Z75741.1-201ENST00000446793 314 ntBASIC2.25□□□□□ -2.05
ZNF546Q86UE3 RNU7-26P-201ENST00000458980 63 ntBASIC2.25□□□□□ -2.05
ZNF546Q86UE3 MRPL42P6-201ENST00000486397 371 ntBASIC2.25□□□□□ -2.05
ZNF546Q86UE3 RPS29P20-201ENST00000489592 171 ntBASIC2.25□□□□□ -2.05
ZNF546Q86UE3 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.25□□□□□ -2.05
ZNF546Q86UE3 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.25□□□□□ -2.05
ZNF546Q86UE3 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.25□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms