Protein–RNA interactions for Protein: Q6UVK1

CSPG4, Chondroitin sulfate proteoglycan 4, humanhuman

Predictions only

Length 2,322 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4Q6UVK1 Y_RNA.518-201ENST00000384552 113 ntBASIC0.86□□□□□ -2.27
CSPG4Q6UVK1 SNORD56-201ENST00000413522 71 ntBASIC0.86□□□□□ -2.27
CSPG4Q6UVK1 AL590233.1-201ENST00000430017 456 ntBASIC0.86□□□□□ -2.27
CSPG4Q6UVK1 HNRNPDLP3-201ENST00000456745 380 ntBASIC0.86□□□□□ -2.27
CSPG4Q6UVK1 AL135752.1-201ENST00000479477 471 ntBASIC0.86□□□□□ -2.27
CSPG4Q6UVK1 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC0.86□□□□□ -2.27
CSPG4Q6UVK1 OR5BM1P-201ENST00000512021 366 ntBASIC0.86□□□□□ -2.27
CSPG4Q6UVK1 SNORA31.20-201ENST00000517111 133 ntBASIC0.86□□□□□ -2.27
CSPG4Q6UVK1 BTF3P12-201ENST00000519620 469 ntBASIC0.86□□□□□ -2.27
CSPG4Q6UVK1 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC0.86□□□□□ -2.27
CSPG4Q6UVK1 MIR6076-201ENST00000617521 113 ntBASIC0.86□□□□□ -2.27
CSPG4Q6UVK1 MIR153-1-201ENST00000384914 90 ntBASIC0.85□□□□□ -2.27
CSPG4Q6UVK1 SNORA46.1-201ENST00000391069 153 ntBASIC0.85□□□□□ -2.27
CSPG4Q6UVK1 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC0.85□□□□□ -2.27
CSPG4Q6UVK1 RNU7-26P-201ENST00000458980 63 ntBASIC0.85□□□□□ -2.27
CSPG4Q6UVK1 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC0.85□□□□□ -2.27
CSPG4Q6UVK1 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC0.85□□□□□ -2.27
CSPG4Q6UVK1 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC0.85□□□□□ -2.27
CSPG4Q6UVK1 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC0.85□□□□□ -2.27
CSPG4Q6UVK1 SNORA31.16-201ENST00000516773 139 ntBASIC0.85□□□□□ -2.27
CSPG4Q6UVK1 AC103833.1-201ENST00000517442 172 ntBASIC0.85□□□□□ -2.27
CSPG4Q6UVK1 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC0.85□□□□□ -2.27
CSPG4Q6UVK1 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC0.85□□□□□ -2.27
CSPG4Q6UVK1 AC022690.1-201ENST00000526681 550 ntBASIC0.85□□□□□ -2.27
CSPG4Q6UVK1 AP003072.2-201ENST00000527756 676 ntBASIC0.85□□□□□ -2.27
CSPG4Q6UVK1 CYCSP26-201ENST00000534107 320 ntBASIC0.85□□□□□ -2.27
CSPG4Q6UVK1 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC0.85□□□□□ -2.27
CSPG4Q6UVK1 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC0.85□□□□□ -2.27
CSPG4Q6UVK1 AC079597.1-201ENST00000624306 508 ntBASIC0.85□□□□□ -2.27
CSPG4Q6UVK1 AC110079.1-202ENST00000635213 138 ntBASIC0.85□□□□□ -2.27
CSPG4Q6UVK1 Y_RNA.280-201ENST00000364765 112 ntBASIC0.84□□□□□ -2.27
CSPG4Q6UVK1 MIR936-201ENST00000401264 98 ntBASIC0.84□□□□□ -2.27
CSPG4Q6UVK1 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC0.84□□□□□ -2.27
CSPG4Q6UVK1 CR848007.2-201ENST00000424918 787 ntBASIC0.84□□□□□ -2.27
CSPG4Q6UVK1 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC0.84□□□□□ -2.27
CSPG4Q6UVK1 SDCBPP1-201ENST00000440192 890 ntBASIC0.84□□□□□ -2.27
CSPG4Q6UVK1 RPS29P28-201ENST00000446439 141 ntBASIC0.84□□□□□ -2.27
CSPG4Q6UVK1 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC0.84□□□□□ -2.27
CSPG4Q6UVK1 PSPHP1-201ENST00000450062 261 ntBASIC0.84□□□□□ -2.27
CSPG4Q6UVK1 AL035407.2-201ENST00000454090 378 ntBASIC0.84□□□□□ -2.27
CSPG4Q6UVK1 RPS15AP34-201ENST00000487776 387 ntBASIC0.84□□□□□ -2.27
CSPG4Q6UVK1 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC0.84□□□□□ -2.27
CSPG4Q6UVK1 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC0.84□□□□□ -2.27
CSPG4Q6UVK1 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC0.84□□□□□ -2.27
CSPG4Q6UVK1 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC0.84□□□□□ -2.27
CSPG4Q6UVK1 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC0.84□□□□□ -2.27
CSPG4Q6UVK1 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC0.84□□□□□ -2.27
CSPG4Q6UVK1 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC0.84□□□□□ -2.27
CSPG4Q6UVK1 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC0.84□□□□□ -2.27
CSPG4Q6UVK1 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC0.84□□□□□ -2.27
CSPG4Q6UVK1 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC0.84□□□□□ -2.28
CSPG4Q6UVK1 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC0.84□□□□□ -2.28
CSPG4Q6UVK1 ZNF90P2-204ENST00000419323 1075 ntBASIC0.84□□□□□ -2.28
CSPG4Q6UVK1 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC0.84□□□□□ -2.28
CSPG4Q6UVK1 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC0.84□□□□□ -2.28
CSPG4Q6UVK1 AC078857.1-201ENST00000469870 667 ntBASIC0.84□□□□□ -2.28
CSPG4Q6UVK1 AC025768.1-201ENST00000510057 267 ntBASIC0.84□□□□□ -2.28
CSPG4Q6UVK1 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC0.84□□□□□ -2.28
CSPG4Q6UVK1 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC0.84□□□□□ -2.28
CSPG4Q6UVK1 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC0.84□□□□□ -2.28
CSPG4Q6UVK1 AC109635.4-202ENST00000531666 412 ntBASIC0.84□□□□□ -2.28
CSPG4Q6UVK1 SMILR-201ENST00000533992 553 ntTSL 4 BASIC0.84□□□□□ -2.28
CSPG4Q6UVK1 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC0.84□□□□□ -2.28
CSPG4Q6UVK1 AC023824.2-201ENST00000566185 400 ntBASIC0.84□□□□□ -2.28
CSPG4Q6UVK1 MTND4LP24-201ENST00000572277 291 ntBASIC0.84□□□□□ -2.28
CSPG4Q6UVK1 MIR4658-201ENST00000584344 65 ntBASIC0.84□□□□□ -2.28
CSPG4Q6UVK1 AC068831.7-201ENST00000616954 363 ntBASIC0.84□□□□□ -2.28
CSPG4Q6UVK1 ZNF33BP1-201ENST00000452497 1834 ntBASIC0.84□□□□□ -2.28
CSPG4Q6UVK1 AP001350.1-201ENST00000601906 1524 ntBASIC0.83□□□□□ -2.28
CSPG4Q6UVK1 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC0.83□□□□□ -2.28
CSPG4Q6UVK1 AL355497.1-201ENST00000406262 551 ntBASIC0.83□□□□□ -2.28
CSPG4Q6UVK1 SNRPEP4-201ENST00000435815 279 ntBASIC0.83□□□□□ -2.28
CSPG4Q6UVK1 AC009296.1-201ENST00000443146 155 ntBASIC0.83□□□□□ -2.28
CSPG4Q6UVK1 RPS27P21-201ENST00000486977 252 ntBASIC0.83□□□□□ -2.28
CSPG4Q6UVK1 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
CSPG4Q6UVK1 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC0.83□□□□□ -2.28
CSPG4Q6UVK1 AC005034.5-201ENST00000604219 466 ntBASIC0.83□□□□□ -2.28
CSPG4Q6UVK1 AP001486.3-201ENST00000615334 372 ntBASIC0.83□□□□□ -2.28
CSPG4Q6UVK1 RNU1-78P-201ENST00000391248 165 ntBASIC0.83□□□□□ -2.28
CSPG4Q6UVK1 PGBD4P6-201ENST00000421501 610 ntBASIC0.83□□□□□ -2.28
CSPG4Q6UVK1 AC233728.2-201ENST00000425348 757 ntBASIC0.83□□□□□ -2.28
CSPG4Q6UVK1 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
CSPG4Q6UVK1 RPS29P23-201ENST00000458635 123 ntBASIC0.83□□□□□ -2.28
CSPG4Q6UVK1 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
CSPG4Q6UVK1 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC0.83□□□□□ -2.28
CSPG4Q6UVK1 U73023.1-201ENST00000603134 700 ntBASIC0.83□□□□□ -2.28
CSPG4Q6UVK1 AC012213.4-201ENST00000606457 354 ntBASIC0.83□□□□□ -2.28
CSPG4Q6UVK1 AC025594.3-201ENST00000613068 790 ntBASIC0.83□□□□□ -2.28
CSPG4Q6UVK1 AC090517.3-201ENST00000625170 141 ntBASIC0.83□□□□□ -2.28
CSPG4Q6UVK1 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC0.83□□□□□ -2.28
CSPG4Q6UVK1 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.83□□□□□ -2.28
CSPG4Q6UVK1 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC0.82□□□□□ -2.28
CSPG4Q6UVK1 RNU6-1072P-201ENST00000384703 107 ntBASIC0.82□□□□□ -2.28
CSPG4Q6UVK1 RNU6-443P-201ENST00000384780 107 ntBASIC0.82□□□□□ -2.28
CSPG4Q6UVK1 MIR513A1-201ENST00000385138 129 ntBASIC0.82□□□□□ -2.28
CSPG4Q6UVK1 AL121769.1-201ENST00000469473 401 ntBASIC0.82□□□□□ -2.28
CSPG4Q6UVK1 RPL21P103-201ENST00000479921 488 ntBASIC0.82□□□□□ -2.28
CSPG4Q6UVK1 MIR4714-201ENST00000580728 77 ntBASIC0.82□□□□□ -2.28
CSPG4Q6UVK1 AP003117.1-201ENST00000602771 554 ntBASIC0.82□□□□□ -2.28
CSPG4Q6UVK1 AC021755.4-201ENST00000616620 456 ntBASIC0.82□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms