Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC3.2□□□□□ -1.9
CTR9Q6PD62 RPL23AP31-201ENST00000456160 467 ntBASIC3.2□□□□□ -1.9
CTR9Q6PD62 MTCO1P42-201ENST00000457379 726 ntBASIC3.2□□□□□ -1.9
CTR9Q6PD62 AP000852.1-201ENST00000472460 573 ntBASIC3.2□□□□□ -1.9
CTR9Q6PD62 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.2□□□□□ -1.9
CTR9Q6PD62 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC3.2□□□□□ -1.9
CTR9Q6PD62 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC3.2□□□□□ -1.9
CTR9Q6PD62 AC022483.1-201ENST00000514020 567 ntBASIC3.2□□□□□ -1.9
CTR9Q6PD62 AC103783.1-201ENST00000520506 373 ntBASIC3.2□□□□□ -1.9
CTR9Q6PD62 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC3.2□□□□□ -1.9
CTR9Q6PD62 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC3.2□□□□□ -1.9
CTR9Q6PD62 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC3.2□□□□□ -1.9
CTR9Q6PD62 MED28P6-201ENST00000558776 231 ntBASIC3.2□□□□□ -1.9
CTR9Q6PD62 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC3.2□□□□□ -1.9
CTR9Q6PD62 AC060771.1-201ENST00000582031 164 ntBASIC3.2□□□□□ -1.9
CTR9Q6PD62 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
CTR9Q6PD62 AC092354.1-201ENST00000606057 376 ntBASIC3.2□□□□□ -1.9
CTR9Q6PD62 DLEU2_6.1-201ENST00000610536 112 ntBASIC3.2□□□□□ -1.9
CTR9Q6PD62 MIR6130-201ENST00000619419 109 ntBASIC3.2□□□□□ -1.9
CTR9Q6PD62 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC3.2□□□□□ -1.9
CTR9Q6PD62 MIR3974-201ENST00000637126 96 ntBASIC3.2□□□□□ -1.9
CTR9Q6PD62 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
CTR9Q6PD62 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
CTR9Q6PD62 AL161431.1-201ENST00000618966 4205 ntBASIC3.2□□□□□ -1.9
CTR9Q6PD62 AC012321.1-201ENST00000561622 1588 ntBASIC3.2□□□□□ -1.9
CTR9Q6PD62 AC138915.1-201ENST00000565427 1685 ntBASIC3.2□□□□□ -1.9
CTR9Q6PD62 ASNSP3-201ENST00000451989 1306 ntBASIC3.19□□□□□ -1.9
CTR9Q6PD62 ATP8A2P3-201ENST00000426792 1536 ntBASIC3.19□□□□□ -1.9
CTR9Q6PD62 Y_RNA.500-201ENST00000384466 111 ntBASIC3.19□□□□□ -1.9
CTR9Q6PD62 EIF4EBP2P3-201ENST00000403144 334 ntBASIC3.19□□□□□ -1.9
CTR9Q6PD62 AL021407.1-201ENST00000404531 386 ntBASIC3.19□□□□□ -1.9
CTR9Q6PD62 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC3.19□□□□□ -1.9
CTR9Q6PD62 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC3.19□□□□□ -1.9
CTR9Q6PD62 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC3.19□□□□□ -1.9
CTR9Q6PD62 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC3.19□□□□□ -1.9
CTR9Q6PD62 AC090774.1-201ENST00000435925 246 ntBASIC3.19□□□□□ -1.9
CTR9Q6PD62 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC3.19□□□□□ -1.9
CTR9Q6PD62 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC3.19□□□□□ -1.9
CTR9Q6PD62 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC3.19□□□□□ -1.9
CTR9Q6PD62 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC3.19□□□□□ -1.9
CTR9Q6PD62 AC009961.3-201ENST00000449832 765 ntBASIC3.19□□□□□ -1.9
CTR9Q6PD62 MTND1P9-201ENST00000453775 944 ntBASIC3.19□□□□□ -1.9
CTR9Q6PD62 AC006445.2-201ENST00000510061 472 ntBASIC3.19□□□□□ -1.9
CTR9Q6PD62 AC118465.1-201ENST00000513820 1271 ntBASIC3.19□□□□□ -1.9
CTR9Q6PD62 SNORA31.21-201ENST00000517180 77 ntBASIC3.19□□□□□ -1.9
CTR9Q6PD62 SNORA31.22-201ENST00000517204 135 ntBASIC3.19□□□□□ -1.9
CTR9Q6PD62 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC3.19□□□□□ -1.9
CTR9Q6PD62 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC3.19□□□□□ -1.9
CTR9Q6PD62 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC3.19□□□□□ -1.9
CTR9Q6PD62 MEG8-218ENST00000556720 456 ntTSL 3 BASIC3.19□□□□□ -1.9
CTR9Q6PD62 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.19□□□□□ -1.9
CTR9Q6PD62 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC3.19□□□□□ -1.9
CTR9Q6PD62 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC3.19□□□□□ -1.9
CTR9Q6PD62 AC008277.2-201ENST00000605196 797 ntBASIC3.19□□□□□ -1.9
CTR9Q6PD62 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC3.19□□□□□ -1.9
CTR9Q6PD62 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC3.19□□□□□ -1.9
CTR9Q6PD62 AC091931.1-201ENST00000623488 728 ntBASIC3.19□□□□□ -1.9
CTR9Q6PD62 AC091965.5-201ENST00000624785 342 ntBASIC3.19□□□□□ -1.9
CTR9Q6PD62 CU459211.1-201ENST00000635667 749 ntBASIC3.19□□□□□ -1.9
CTR9Q6PD62 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
CTR9Q6PD62 AC011460.1-201ENST00000636268 1834 ntBASIC3.19□□□□□ -1.9
CTR9Q6PD62 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CTR9Q6PD62 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
CTR9Q6PD62 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC3.18□□□□□ -1.9
CTR9Q6PD62 AC092125.1-201ENST00000562568 1995 ntBASIC3.18□□□□□ -1.9
CTR9Q6PD62 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC3.18□□□□□ -1.9
CTR9Q6PD62 RNU6-859P-201ENST00000362728 107 ntBASIC3.18□□□□□ -1.9
CTR9Q6PD62 RNU5E-8P-201ENST00000363502 116 ntBASIC3.18□□□□□ -1.9
CTR9Q6PD62 RPA3-203ENST00000401447 414 ntTSL 3 BASIC3.18□□□□□ -1.9
CTR9Q6PD62 RNA5SP38-201ENST00000410750 119 ntBASIC3.18□□□□□ -1.9
CTR9Q6PD62 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CTR9Q6PD62 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC3.18□□□□□ -1.9
CTR9Q6PD62 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.18□□□□□ -1.9
CTR9Q6PD62 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC3.18□□□□□ -1.9
CTR9Q6PD62 ARL5AP4-201ENST00000430731 512 ntBASIC3.18□□□□□ -1.9
CTR9Q6PD62 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC3.18□□□□□ -1.9
CTR9Q6PD62 AC024082.2-201ENST00000434771 238 ntBASIC3.18□□□□□ -1.9
CTR9Q6PD62 UBE2V1P13-201ENST00000436983 439 ntBASIC3.18□□□□□ -1.9
CTR9Q6PD62 RPL26P6-201ENST00000440913 438 ntBASIC3.18□□□□□ -1.9
CTR9Q6PD62 AC234775.1-201ENST00000454247 670 ntBASIC3.18□□□□□ -1.9
CTR9Q6PD62 RN7SL432P-201ENST00000484057 298 ntBASIC3.18□□□□□ -1.9
CTR9Q6PD62 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.18□□□□□ -1.9
CTR9Q6PD62 MEPE-206ENST00000511670 550 ntTSL 4 BASIC3.18□□□□□ -1.9
CTR9Q6PD62 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC3.18□□□□□ -1.9
CTR9Q6PD62 Y_RNA.688-201ENST00000516565 95 ntBASIC3.18□□□□□ -1.9
CTR9Q6PD62 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC3.18□□□□□ -1.9
CTR9Q6PD62 AP000857.1-201ENST00000532151 543 ntBASIC3.18□□□□□ -1.9
CTR9Q6PD62 AL133271.1-201ENST00000538229 291 ntBASIC3.18□□□□□ -1.9
CTR9Q6PD62 COX6CP3-201ENST00000580869 223 ntBASIC3.18□□□□□ -1.9
CTR9Q6PD62 NRBF2P5-201ENST00000603087 788 ntBASIC3.18□□□□□ -1.9
CTR9Q6PD62 AL031775.1-201ENST00000607014 887 ntBASIC3.18□□□□□ -1.9
CTR9Q6PD62 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC3.18□□□□□ -1.9
CTR9Q6PD62 AC104010.1-201ENST00000616889 150 ntBASIC3.18□□□□□ -1.9
CTR9Q6PD62 AC008443.7-201ENST00000622195 246 ntBASIC3.18□□□□□ -1.9
CTR9Q6PD62 AC010297.1-201ENST00000623948 149 ntBASIC3.18□□□□□ -1.9
CTR9Q6PD62 MTCO1P9-201ENST00000505577 1534 ntBASIC3.18□□□□□ -1.9
CTR9Q6PD62 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.17□□□□□ -1.9
CTR9Q6PD62 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
CTR9Q6PD62 RNU4-21P-201ENST00000362802 126 ntBASIC3.17□□□□□ -1.9
CTR9Q6PD62 RNU6-637P-201ENST00000384050 107 ntBASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 131.7 ms