Protein–RNA interactions for Protein: Q5W0Q7

USPL1, SUMO-specific isopeptidase USPL1, humanhuman

Predictions only

Length 1,092 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USPL1Q5W0Q7 MIR3149-201ENST00000584629 83 ntBASIC5.3□□□□□ -1.56
USPL1Q5W0Q7 AL158032.1-201ENST00000605401 106 ntBASIC5.3□□□□□ -1.56
USPL1Q5W0Q7 AC106871.1-201ENST00000568324 3102 ntBASIC5.3□□□□□ -1.56
USPL1Q5W0Q7 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
USPL1Q5W0Q7 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
USPL1Q5W0Q7 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
USPL1Q5W0Q7 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC5.3□□□□□ -1.56
USPL1Q5W0Q7 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC5.29□□□□□ -1.56
USPL1Q5W0Q7 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
USPL1Q5W0Q7 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
USPL1Q5W0Q7 SNORA63.1-201ENST00000362493 131 ntBASIC5.29□□□□□ -1.56
USPL1Q5W0Q7 ACEA_U3.1-201ENST00000363057 217 ntBASIC5.29□□□□□ -1.56
USPL1Q5W0Q7 RNA5SP22-201ENST00000365393 109 ntBASIC5.29□□□□□ -1.56
USPL1Q5W0Q7 RNU6-331P-201ENST00000384724 107 ntBASIC5.29□□□□□ -1.56
USPL1Q5W0Q7 RNU6-837P-201ENST00000391056 108 ntBASIC5.29□□□□□ -1.56
USPL1Q5W0Q7 SNORA75.6-201ENST00000391318 127 ntBASIC5.29□□□□□ -1.56
USPL1Q5W0Q7 AL590704.1-201ENST00000402856 794 ntBASIC5.29□□□□□ -1.56
USPL1Q5W0Q7 MIR1302-3-201ENST00000408128 138 ntBASIC5.29□□□□□ -1.56
USPL1Q5W0Q7 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
USPL1Q5W0Q7 RAB9AP3-201ENST00000412737 573 ntBASIC5.29□□□□□ -1.56
USPL1Q5W0Q7 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC5.29□□□□□ -1.56
USPL1Q5W0Q7 AL669831.1-202ENST00000428504 417 ntBASIC5.29□□□□□ -1.56
USPL1Q5W0Q7 RAB9AP1-201ENST00000449393 573 ntBASIC5.29□□□□□ -1.56
USPL1Q5W0Q7 RPL37P6-201ENST00000460682 294 ntBASIC5.29□□□□□ -1.56
USPL1Q5W0Q7 AC015911.1-201ENST00000495111 156 ntBASIC5.29□□□□□ -1.56
USPL1Q5W0Q7 SRP72-202ENST00000504757 745 ntTSL 2 BASIC5.29□□□□□ -1.56
USPL1Q5W0Q7 RNU6-1137P-201ENST00000517073 99 ntBASIC5.29□□□□□ -1.56
USPL1Q5W0Q7 AC087854.1-201ENST00000519706 414 ntBASIC5.29□□□□□ -1.56
USPL1Q5W0Q7 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC5.29□□□□□ -1.56
USPL1Q5W0Q7 AC006064.5-201ENST00000541782 248 ntBASIC5.29□□□□□ -1.56
USPL1Q5W0Q7 MIR4503-201ENST00000582187 83 ntBASIC5.29□□□□□ -1.56
USPL1Q5W0Q7 AC067852.3-201ENST00000589177 561 ntBASIC5.29□□□□□ -1.56
USPL1Q5W0Q7 AL592437.2-201ENST00000421655 2434 ntBASIC5.29□□□□□ -1.56
USPL1Q5W0Q7 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
USPL1Q5W0Q7 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
USPL1Q5W0Q7 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC5.29□□□□□ -1.56
USPL1Q5W0Q7 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
USPL1Q5W0Q7 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
USPL1Q5W0Q7 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
USPL1Q5W0Q7 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC5.28□□□□□ -1.56
USPL1Q5W0Q7 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
USPL1Q5W0Q7 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
USPL1Q5W0Q7 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
USPL1Q5W0Q7 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
USPL1Q5W0Q7 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
USPL1Q5W0Q7 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC5.28□□□□□ -1.56
USPL1Q5W0Q7 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC5.28□□□□□ -1.56
USPL1Q5W0Q7 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
USPL1Q5W0Q7 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
USPL1Q5W0Q7 Y_RNA.80-201ENST00000362996 102 ntBASIC5.28□□□□□ -1.56
USPL1Q5W0Q7 Y_RNA.149-201ENST00000363558 117 ntBASIC5.28□□□□□ -1.56
USPL1Q5W0Q7 RNU6-890P-201ENST00000384121 107 ntBASIC5.28□□□□□ -1.56
USPL1Q5W0Q7 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
USPL1Q5W0Q7 RNU2-43P-201ENST00000410306 190 ntBASIC5.28□□□□□ -1.56
USPL1Q5W0Q7 Y_RNA.605-201ENST00000410577 105 ntBASIC5.28□□□□□ -1.56
USPL1Q5W0Q7 MIR1911-201ENST00000410783 80 ntBASIC5.28□□□□□ -1.56
USPL1Q5W0Q7 AMMECR1LP1-201ENST00000415152 841 ntBASIC5.28□□□□□ -1.56
USPL1Q5W0Q7 AC090774.1-201ENST00000435925 246 ntBASIC5.28□□□□□ -1.56
USPL1Q5W0Q7 RPL23AP46-201ENST00000438548 490 ntBASIC5.28□□□□□ -1.56
USPL1Q5W0Q7 RPL21P23-201ENST00000446654 460 ntBASIC5.28□□□□□ -1.56
USPL1Q5W0Q7 RNA5SP360-201ENST00000516555 118 ntBASIC5.28□□□□□ -1.56
USPL1Q5W0Q7 Y_RNA.689-201ENST00000516589 107 ntBASIC5.28□□□□□ -1.56
USPL1Q5W0Q7 RN7SKP60-201ENST00000516985 239 ntBASIC5.28□□□□□ -1.56
USPL1Q5W0Q7 AC018462.2-201ENST00000605375 395 ntBASIC5.28□□□□□ -1.56
USPL1Q5W0Q7 AC011890.2-201ENST00000613393 294 ntBASIC5.28□□□□□ -1.56
USPL1Q5W0Q7 AL450472.3-201ENST00000615578 367 ntBASIC5.28□□□□□ -1.56
USPL1Q5W0Q7 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
USPL1Q5W0Q7 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
USPL1Q5W0Q7 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC5.28□□□□□ -1.56
USPL1Q5W0Q7 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
USPL1Q5W0Q7 MAPK10-303ENST00000641324 3959 ntBASIC5.28□□□□□ -1.56
USPL1Q5W0Q7 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC5.28□□□□□ -1.56
USPL1Q5W0Q7 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
USPL1Q5W0Q7 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC5.27□□□□□ -1.57
USPL1Q5W0Q7 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
USPL1Q5W0Q7 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
USPL1Q5W0Q7 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
USPL1Q5W0Q7 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC5.27□□□□□ -1.57
USPL1Q5W0Q7 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC5.27□□□□□ -1.57
USPL1Q5W0Q7 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
USPL1Q5W0Q7 ZNF807-201ENST00000328088 1707 ntBASIC5.27□□□□□ -1.57
USPL1Q5W0Q7 Y_RNA.463-201ENST00000384271 102 ntBASIC5.27□□□□□ -1.57
USPL1Q5W0Q7 RNU6-1050P-201ENST00000410388 107 ntBASIC5.27□□□□□ -1.57
USPL1Q5W0Q7 RNU6-293P-201ENST00000411259 106 ntBASIC5.27□□□□□ -1.57
USPL1Q5W0Q7 AC080125.1-201ENST00000414888 684 ntBASIC5.27□□□□□ -1.57
USPL1Q5W0Q7 PPP1R11P2-201ENST00000423543 382 ntBASIC5.27□□□□□ -1.57
USPL1Q5W0Q7 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC5.27□□□□□ -1.57
USPL1Q5W0Q7 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC5.27□□□□□ -1.57
USPL1Q5W0Q7 AC110792.1-201ENST00000491826 472 ntBASIC5.27□□□□□ -1.57
USPL1Q5W0Q7 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC5.27□□□□□ -1.57
USPL1Q5W0Q7 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC5.27□□□□□ -1.57
USPL1Q5W0Q7 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC5.27□□□□□ -1.57
USPL1Q5W0Q7 AC026726.1-201ENST00000512859 601 ntBASIC5.27□□□□□ -1.57
USPL1Q5W0Q7 AC026782.1-201ENST00000512952 449 ntBASIC5.27□□□□□ -1.57
USPL1Q5W0Q7 RNU6-764P-201ENST00000516396 105 ntBASIC5.27□□□□□ -1.57
USPL1Q5W0Q7 RNU6-1213P-201ENST00000517075 94 ntBASIC5.27□□□□□ -1.57
USPL1Q5W0Q7 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC5.27□□□□□ -1.57
USPL1Q5W0Q7 AC100770.1-201ENST00000532310 322 ntBASIC5.27□□□□□ -1.57
USPL1Q5W0Q7 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC5.27□□□□□ -1.57
USPL1Q5W0Q7 OR4H12P-201ENST00000556269 907 ntBASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 116.1 ms