Protein–RNA interactions for Protein: Q5T4S7

UBR4, E3 ubiquitin-protein ligase UBR4, humanhuman

Predictions only

Length 5,183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4Q5T4S7 FAM71BP1-201ENST00000604431 523 ntBASIC0.62□□□□□ -2.31
UBR4Q5T4S7 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC0.62□□□□□ -2.31
UBR4Q5T4S7 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC0.62□□□□□ -2.31
UBR4Q5T4S7 AC010329.5-201ENST00000623497 2174 ntBASIC0.62□□□□□ -2.31
UBR4Q5T4S7 U8.1-201ENST00000362843 134 ntBASIC0.62□□□□□ -2.31
UBR4Q5T4S7 RNU2-25P-201ENST00000411041 191 ntBASIC0.62□□□□□ -2.31
UBR4Q5T4S7 RSL24D1P8-201ENST00000434442 492 ntBASIC0.62□□□□□ -2.31
UBR4Q5T4S7 AL157827.1-201ENST00000447622 132 ntBASIC0.62□□□□□ -2.31
UBR4Q5T4S7 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC0.62□□□□□ -2.31
UBR4Q5T4S7 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC0.62□□□□□ -2.31
UBR4Q5T4S7 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC0.62□□□□□ -2.31
UBR4Q5T4S7 AC090821.2-201ENST00000523552 176 ntBASIC0.62□□□□□ -2.31
UBR4Q5T4S7 AP004607.1-201ENST00000524456 203 ntBASIC0.62□□□□□ -2.31
UBR4Q5T4S7 MIR3618-201ENST00000580330 88 ntBASIC0.62□□□□□ -2.31
UBR4Q5T4S7 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC0.62□□□□□ -2.31
UBR4Q5T4S7 SNORA51.6-201ENST00000384151 125 ntBASIC0.62□□□□□ -2.31
UBR4Q5T4S7 AL355497.1-201ENST00000406262 551 ntBASIC0.62□□□□□ -2.31
UBR4Q5T4S7 RPS29P20-201ENST00000489592 171 ntBASIC0.62□□□□□ -2.31
UBR4Q5T4S7 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC0.62□□□□□ -2.31
UBR4Q5T4S7 MTCYBP37-201ENST00000510642 1133 ntBASIC0.62□□□□□ -2.31
UBR4Q5T4S7 AL121917.1-203ENST00000605534 577 ntBASIC0.62□□□□□ -2.31
UBR4Q5T4S7 AC099778.2-201ENST00000610904 211 ntBASIC0.62□□□□□ -2.31
UBR4Q5T4S7 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC0.61□□□□□ -2.31
UBR4Q5T4S7 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC0.61□□□□□ -2.31
UBR4Q5T4S7 SEC63P1-201ENST00000425785 1258 ntBASIC0.61□□□□□ -2.31
UBR4Q5T4S7 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC0.61□□□□□ -2.31
UBR4Q5T4S7 RAB9AP2-201ENST00000443911 597 ntBASIC0.61□□□□□ -2.31
UBR4Q5T4S7 FAM206BP-201ENST00000510179 541 ntBASIC0.61□□□□□ -2.31
UBR4Q5T4S7 AC092954.1-201ENST00000609121 445 ntBASIC0.61□□□□□ -2.31
UBR4Q5T4S7 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC0.61□□□□□ -2.31
UBR4Q5T4S7 OR1L1-202ENST00000373686 1083 ntBASIC0.61□□□□□ -2.31
UBR4Q5T4S7 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC0.61□□□□□ -2.31
UBR4Q5T4S7 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC0.61□□□□□ -2.31
UBR4Q5T4S7 AC123912.5-201ENST00000605470 343 ntBASIC0.61□□□□□ -2.31
UBR4Q5T4S7 AP000648.3-201ENST00000623539 4507 ntBASIC0.61□□□□□ -2.31
UBR4Q5T4S7 AC109780.2-201ENST00000413467 845 ntBASIC0.61□□□□□ -2.31
UBR4Q5T4S7 MTND5P25-201ENST00000430499 799 ntBASIC0.61□□□□□ -2.31
UBR4Q5T4S7 TH2LCRR-202ENST00000435042 472 ntTSL 5 BASIC0.61□□□□□ -2.31
UBR4Q5T4S7 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC0.61□□□□□ -2.31
UBR4Q5T4S7 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC0.61□□□□□ -2.31
UBR4Q5T4S7 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC0.61□□□□□ -2.31
UBR4Q5T4S7 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC0.61□□□□□ -2.31
UBR4Q5T4S7 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC0.61□□□□□ -2.31
UBR4Q5T4S7 RNU6-249P-201ENST00000363016 102 ntBASIC0.61□□□□□ -2.31
UBR4Q5T4S7 FNDC3CP-201ENST00000420795 1155 ntBASIC0.61□□□□□ -2.31
UBR4Q5T4S7 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC0.61□□□□□ -2.31
UBR4Q5T4S7 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC0.61□□□□□ -2.31
UBR4Q5T4S7 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC0.61□□□□□ -2.31
UBR4Q5T4S7 AC091488.1-201ENST00000604239 660 ntBASIC0.61□□□□□ -2.31
UBR4Q5T4S7 AC108706.1-201ENST00000611053 297 ntBASIC0.61□□□□□ -2.31
UBR4Q5T4S7 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC0.6□□□□□ -2.31
UBR4Q5T4S7 AC096571.1-202ENST00000506634 735 ntBASIC0.6□□□□□ -2.31
UBR4Q5T4S7 AC113155.1-201ENST00000511141 769 ntBASIC0.6□□□□□ -2.31
UBR4Q5T4S7 Y_RNA.675-201ENST00000516389 149 ntBASIC0.6□□□□□ -2.31
UBR4Q5T4S7 AC104115.2-201ENST00000523026 687 ntBASIC0.6□□□□□ -2.31
UBR4Q5T4S7 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC0.6□□□□□ -2.31
UBR4Q5T4S7 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC0.6□□□□□ -2.31
UBR4Q5T4S7 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC0.6□□□□□ -2.31
UBR4Q5T4S7 USP12PX-201ENST00000432383 1057 ntBASIC0.6□□□□□ -2.31
UBR4Q5T4S7 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC0.6□□□□□ -2.31
UBR4Q5T4S7 AC136932.1-201ENST00000574771 208 ntBASIC0.6□□□□□ -2.31
UBR4Q5T4S7 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC0.6□□□□□ -2.31
UBR4Q5T4S7 AP001180.6-201ENST00000584918 159 ntBASIC0.6□□□□□ -2.31
UBR4Q5T4S7 AC010620.1-201ENST00000601088 1102 ntBASIC0.6□□□□□ -2.31
UBR4Q5T4S7 AC073869.7-201ENST00000640874 297 ntBASIC0.6□□□□□ -2.31
UBR4Q5T4S7 RNU6-942P-201ENST00000363002 107 ntBASIC0.6□□□□□ -2.31
UBR4Q5T4S7 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC0.6□□□□□ -2.31
UBR4Q5T4S7 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC0.6□□□□□ -2.31
UBR4Q5T4S7 ATG10-AS1-201ENST00000504846 648 ntBASIC0.6□□□□□ -2.31
UBR4Q5T4S7 RNU6-496P-201ENST00000516145 99 ntBASIC0.6□□□□□ -2.31
UBR4Q5T4S7 RNU2-44P-201ENST00000516795 194 ntBASIC0.6□□□□□ -2.31
UBR4Q5T4S7 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC0.6□□□□□ -2.31
UBR4Q5T4S7 AL158801.5-201ENST00000623123 465 ntBASIC0.6□□□□□ -2.31
UBR4Q5T4S7 AC000123.2-201ENST00000623124 461 ntBASIC0.6□□□□□ -2.31
UBR4Q5T4S7 AC090142.3-201ENST00000519012 385 ntBASIC0.6□□□□□ -2.31
UBR4Q5T4S7 AP003033.1-201ENST00000527244 415 ntBASIC0.6□□□□□ -2.31
UBR4Q5T4S7 ACTR3BP3-201ENST00000565577 979 ntBASIC0.6□□□□□ -2.31
UBR4Q5T4S7 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC0.59□□□□□ -2.31
UBR4Q5T4S7 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC0.59□□□□□ -2.31
UBR4Q5T4S7 AC087343.1-201ENST00000477341 475 ntBASIC0.59□□□□□ -2.31
UBR4Q5T4S7 SNORA76.2-201ENST00000517095 137 ntBASIC0.59□□□□□ -2.31
UBR4Q5T4S7 SNORA31.20-201ENST00000517111 133 ntBASIC0.59□□□□□ -2.31
UBR4Q5T4S7 AC009296.1-201ENST00000443146 155 ntBASIC0.59□□□□□ -2.31
UBR4Q5T4S7 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC0.59□□□□□ -2.31
UBR4Q5T4S7 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC0.59□□□□□ -2.31
UBR4Q5T4S7 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC0.59□□□□□ -2.31
UBR4Q5T4S7 AC133485.1-201ENST00000567176 124 ntBASIC0.59□□□□□ -2.31
UBR4Q5T4S7 AC138907.6-201ENST00000568401 126 ntBASIC0.59□□□□□ -2.31
UBR4Q5T4S7 AC018754.1-201ENST00000607486 925 ntBASIC0.59□□□□□ -2.31
UBR4Q5T4S7 HMGB1P49-201ENST00000418882 569 ntBASIC0.59□□□□□ -2.32
UBR4Q5T4S7 RPL30P4-201ENST00000429309 333 ntBASIC0.59□□□□□ -2.32
UBR4Q5T4S7 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC0.59□□□□□ -2.32
UBR4Q5T4S7 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC0.59□□□□□ -2.32
UBR4Q5T4S7 RNY3P5-201ENST00000384127 102 ntBASIC0.59□□□□□ -2.32
UBR4Q5T4S7 DPPA2P1-201ENST00000428060 556 ntBASIC0.59□□□□□ -2.32
UBR4Q5T4S7 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC0.59□□□□□ -2.32
UBR4Q5T4S7 AF186190.1-201ENST00000517470 480 ntBASIC0.59□□□□□ -2.32
UBR4Q5T4S7 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC0.59□□□□□ -2.32
UBR4Q5T4S7 CYP2C61P-201ENST00000604072 290 ntBASIC0.59□□□□□ -2.32
UBR4Q5T4S7 AL049779.4-201ENST00000604500 156 ntBASIC0.59□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 117.5 ms