Protein–RNA interactions for Protein: Q53EP0

FNDC3B, Fibronectin type III domain-containing protein 3B, humanhuman

Known RBP Predictions only

Length 1,204 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3BQ53EP0 AC007685.1-201ENST00000329806 452 ntBASIC4.28□□□□□ -1.72
FNDC3BQ53EP0 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
FNDC3BQ53EP0 RNU4-79P-201ENST00000362764 141 ntBASIC4.28□□□□□ -1.72
FNDC3BQ53EP0 Y_RNA.58-201ENST00000362807 102 ntBASIC4.28□□□□□ -1.72
FNDC3BQ53EP0 Y_RNA.154-201ENST00000363624 102 ntBASIC4.28□□□□□ -1.72
FNDC3BQ53EP0 RNY3P1-201ENST00000365085 102 ntBASIC4.28□□□□□ -1.72
FNDC3BQ53EP0 RNU1-64P-201ENST00000365443 163 ntBASIC4.28□□□□□ -1.72
FNDC3BQ53EP0 RNY3-201ENST00000365484 102 ntBASIC4.28□□□□□ -1.72
FNDC3BQ53EP0 RNA5SP283-201ENST00000365604 119 ntBASIC4.28□□□□□ -1.72
FNDC3BQ53EP0 RNU6-395P-201ENST00000365662 106 ntBASIC4.28□□□□□ -1.72
FNDC3BQ53EP0 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
FNDC3BQ53EP0 Y_RNA.480-201ENST00000384364 102 ntBASIC4.28□□□□□ -1.72
FNDC3BQ53EP0 Y_RNA.490-201ENST00000384413 102 ntBASIC4.28□□□□□ -1.72
FNDC3BQ53EP0 SNORA37-201ENST00000384504 129 ntBASIC4.28□□□□□ -1.72
FNDC3BQ53EP0 MIR578-201ENST00000384828 96 ntBASIC4.28□□□□□ -1.72
FNDC3BQ53EP0 SNORD66.1-201ENST00000391230 76 ntBASIC4.28□□□□□ -1.72
FNDC3BQ53EP0 VN1R36P-201ENST00000414936 291 ntBASIC4.28□□□□□ -1.72
FNDC3BQ53EP0 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.28□□□□□ -1.72
FNDC3BQ53EP0 AL158156.1-201ENST00000422509 473 ntBASIC4.28□□□□□ -1.72
FNDC3BQ53EP0 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC4.28□□□□□ -1.72
FNDC3BQ53EP0 MTND1P14-201ENST00000427400 950 ntBASIC4.28□□□□□ -1.72
FNDC3BQ53EP0 AL117339.2-201ENST00000430475 180 ntBASIC4.28□□□□□ -1.72
FNDC3BQ53EP0 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC4.28□□□□□ -1.72
FNDC3BQ53EP0 RPS24P13-201ENST00000442520 397 ntBASIC4.28□□□□□ -1.72
FNDC3BQ53EP0 AL162151.2-201ENST00000448875 158 ntBASIC4.28□□□□□ -1.72
FNDC3BQ53EP0 RPS4XP13-201ENST00000483219 789 ntBASIC4.28□□□□□ -1.72
FNDC3BQ53EP0 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC4.28□□□□□ -1.72
FNDC3BQ53EP0 RPL39P5-202ENST00000512505 151 ntBASIC4.28□□□□□ -1.72
FNDC3BQ53EP0 RNU6-323P-201ENST00000521915 107 ntBASIC4.28□□□□□ -1.72
FNDC3BQ53EP0 IGKV2D-19-201ENST00000523346 262 ntBASIC4.28□□□□□ -1.72
FNDC3BQ53EP0 CYCSP27-201ENST00000527643 293 ntBASIC4.28□□□□□ -1.72
FNDC3BQ53EP0 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.28□□□□□ -1.72
FNDC3BQ53EP0 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC4.28□□□□□ -1.72
FNDC3BQ53EP0 TRAV28-201ENST00000557548 323 ntBASIC4.28□□□□□ -1.72
FNDC3BQ53EP0 MTCO3P23-201ENST00000561363 289 ntBASIC4.28□□□□□ -1.72
FNDC3BQ53EP0 AC106785.1-201ENST00000565935 262 ntBASIC4.28□□□□□ -1.72
FNDC3BQ53EP0 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC4.28□□□□□ -1.72
FNDC3BQ53EP0 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC4.28□□□□□ -1.72
FNDC3BQ53EP0 AC090574.1-201ENST00000623186 233 ntBASIC4.28□□□□□ -1.72
FNDC3BQ53EP0 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC4.28□□□□□ -1.72
FNDC3BQ53EP0 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC4.28□□□□□ -1.72
FNDC3BQ53EP0 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.28□□□□□ -1.72
FNDC3BQ53EP0 AC007785.2-201ENST00000598627 1916 ntBASIC4.28□□□□□ -1.72
FNDC3BQ53EP0 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC4.28□□□□□ -1.72
FNDC3BQ53EP0 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
FNDC3BQ53EP0 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.28□□□□□ -1.72
FNDC3BQ53EP0 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
FNDC3BQ53EP0 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
FNDC3BQ53EP0 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.28□□□□□ -1.72
FNDC3BQ53EP0 AC006026.1-201ENST00000444025 1803 ntBASIC4.28□□□□□ -1.72
FNDC3BQ53EP0 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.28□□□□□ -1.73
FNDC3BQ53EP0 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
FNDC3BQ53EP0 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC4.27□□□□□ -1.73
FNDC3BQ53EP0 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.27□□□□□ -1.73
FNDC3BQ53EP0 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
FNDC3BQ53EP0 Y_RNA.33-201ENST00000362591 102 ntBASIC4.27□□□□□ -1.73
FNDC3BQ53EP0 MIR325-201ENST00000385260 98 ntBASIC4.27□□□□□ -1.73
FNDC3BQ53EP0 RPL21P65-201ENST00000406094 466 ntBASIC4.27□□□□□ -1.73
FNDC3BQ53EP0 RPS20P15-201ENST00000412792 311 ntBASIC4.27□□□□□ -1.73
FNDC3BQ53EP0 AL139396.1-201ENST00000421137 167 ntBASIC4.27□□□□□ -1.73
FNDC3BQ53EP0 RPL23AP69-201ENST00000431134 458 ntBASIC4.27□□□□□ -1.73
FNDC3BQ53EP0 AC092573.2-201ENST00000434546 243 ntBASIC4.27□□□□□ -1.73
FNDC3BQ53EP0 CECR9-201ENST00000453421 199 ntBASIC4.27□□□□□ -1.73
FNDC3BQ53EP0 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.27□□□□□ -1.73
FNDC3BQ53EP0 RPL7P43-201ENST00000478876 753 ntBASIC4.27□□□□□ -1.73
FNDC3BQ53EP0 RN7SL604P-201ENST00000492589 296 ntBASIC4.27□□□□□ -1.73
FNDC3BQ53EP0 MTND3P25-201ENST00000509243 135 ntBASIC4.27□□□□□ -1.73
FNDC3BQ53EP0 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC4.27□□□□□ -1.73
FNDC3BQ53EP0 FTH1P9-201ENST00000513251 355 ntBASIC4.27□□□□□ -1.73
FNDC3BQ53EP0 RNU6-1088P-201ENST00000516850 104 ntBASIC4.27□□□□□ -1.73
FNDC3BQ53EP0 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC4.27□□□□□ -1.73
FNDC3BQ53EP0 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC4.27□□□□□ -1.73
FNDC3BQ53EP0 AC022655.2-201ENST00000577280 318 ntBASIC4.27□□□□□ -1.73
FNDC3BQ53EP0 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC4.27□□□□□ -1.73
FNDC3BQ53EP0 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC4.27□□□□□ -1.73
FNDC3BQ53EP0 AL138721.1-201ENST00000616756 179 ntBASIC4.27□□□□□ -1.73
FNDC3BQ53EP0 AC048347.1-201ENST00000624621 427 ntBASIC4.27□□□□□ -1.73
FNDC3BQ53EP0 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
FNDC3BQ53EP0 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
FNDC3BQ53EP0 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.27□□□□□ -1.73
FNDC3BQ53EP0 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.27□□□□□ -1.73
FNDC3BQ53EP0 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.26□□□□□ -1.73
FNDC3BQ53EP0 AL672296.1-201ENST00000427780 2158 ntBASIC4.26□□□□□ -1.73
FNDC3BQ53EP0 RNA5SP513-201ENST00000364648 118 ntBASIC4.26□□□□□ -1.73
FNDC3BQ53EP0 RNA5SP22-201ENST00000365393 109 ntBASIC4.26□□□□□ -1.73
FNDC3BQ53EP0 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
FNDC3BQ53EP0 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.26□□□□□ -1.73
FNDC3BQ53EP0 Y_RNA.460-201ENST00000384255 102 ntBASIC4.26□□□□□ -1.73
FNDC3BQ53EP0 MIR1179-201ENST00000408703 91 ntBASIC4.26□□□□□ -1.73
FNDC3BQ53EP0 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
FNDC3BQ53EP0 RNU6-1025P-201ENST00000410629 104 ntBASIC4.26□□□□□ -1.73
FNDC3BQ53EP0 AC073063.1-201ENST00000434352 607 ntBASIC4.26□□□□□ -1.73
FNDC3BQ53EP0 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC4.26□□□□□ -1.73
FNDC3BQ53EP0 HMGB1P12-201ENST00000438594 598 ntBASIC4.26□□□□□ -1.73
FNDC3BQ53EP0 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
FNDC3BQ53EP0 AL360271.2-201ENST00000447710 161 ntBASIC4.26□□□□□ -1.73
FNDC3BQ53EP0 AC107399.1-201ENST00000451226 265 ntBASIC4.26□□□□□ -1.73
FNDC3BQ53EP0 AC233279.1-201ENST00000455300 423 ntBASIC4.26□□□□□ -1.73
FNDC3BQ53EP0 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.26□□□□□ -1.73
FNDC3BQ53EP0 RPS23P3-201ENST00000470993 430 ntBASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 138.6 ms