Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 MIR6852-201ENST00000621699 66 ntBASIC3.46□□□□□ -1.85
PDS5AQ29RF7 PLCE1P1-201ENST00000622094 305 ntBASIC3.46□□□□□ -1.85
PDS5AQ29RF7 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC3.46□□□□□ -1.85
PDS5AQ29RF7 MTND5P3-201ENST00000438536 1800 ntBASIC3.46□□□□□ -1.86
PDS5AQ29RF7 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
PDS5AQ29RF7 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
PDS5AQ29RF7 AC062016.1-201ENST00000355719 319 ntBASIC3.45□□□□□ -1.86
PDS5AQ29RF7 SNORA5B-201ENST00000363786 132 ntBASIC3.45□□□□□ -1.86
PDS5AQ29RF7 RNU6-263P-201ENST00000363811 107 ntBASIC3.45□□□□□ -1.86
PDS5AQ29RF7 RN7SKP226-201ENST00000364912 300 ntBASIC3.45□□□□□ -1.86
PDS5AQ29RF7 MIR9-1-201ENST00000385198 89 ntBASIC3.45□□□□□ -1.86
PDS5AQ29RF7 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
PDS5AQ29RF7 CCNG1P1-201ENST00000406783 885 ntBASIC3.45□□□□□ -1.86
PDS5AQ29RF7 RNU2-8P-201ENST00000410727 190 ntBASIC3.45□□□□□ -1.86
PDS5AQ29RF7 RNU4-78P-201ENST00000410940 126 ntBASIC3.45□□□□□ -1.86
PDS5AQ29RF7 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.45□□□□□ -1.86
PDS5AQ29RF7 BX295541.1-201ENST00000417774 250 ntBASIC3.45□□□□□ -1.86
PDS5AQ29RF7 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC3.45□□□□□ -1.86
PDS5AQ29RF7 AC092832.1-201ENST00000422934 400 ntBASIC3.45□□□□□ -1.86
PDS5AQ29RF7 DUTP6-201ENST00000425573 462 ntBASIC3.45□□□□□ -1.86
PDS5AQ29RF7 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC3.45□□□□□ -1.86
PDS5AQ29RF7 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
PDS5AQ29RF7 AC093392.2-201ENST00000450682 337 ntBASIC3.45□□□□□ -1.86
PDS5AQ29RF7 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC3.45□□□□□ -1.86
PDS5AQ29RF7 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
PDS5AQ29RF7 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC3.45□□□□□ -1.86
PDS5AQ29RF7 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC3.45□□□□□ -1.86
PDS5AQ29RF7 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC3.45□□□□□ -1.86
PDS5AQ29RF7 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC3.45□□□□□ -1.86
PDS5AQ29RF7 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC3.45□□□□□ -1.86
PDS5AQ29RF7 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC3.45□□□□□ -1.86
PDS5AQ29RF7 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC3.45□□□□□ -1.86
PDS5AQ29RF7 AC027807.1-201ENST00000559921 996 ntBASIC3.45□□□□□ -1.86
PDS5AQ29RF7 AC138761.3-201ENST00000579993 334 ntBASIC3.45□□□□□ -1.86
PDS5AQ29RF7 AC006023.1-201ENST00000603944 259 ntBASIC3.45□□□□□ -1.86
PDS5AQ29RF7 AC011451.2-201ENST00000604303 598 ntBASIC3.45□□□□□ -1.86
PDS5AQ29RF7 AC121334.2-201ENST00000605387 271 ntBASIC3.45□□□□□ -1.86
PDS5AQ29RF7 AC136475.10-201ENST00000620253 385 ntBASIC3.45□□□□□ -1.86
PDS5AQ29RF7 AL356585.4-201ENST00000623078 1229 ntBASIC3.45□□□□□ -1.86
PDS5AQ29RF7 AC110994.2-201ENST00000635481 492 ntBASIC3.45□□□□□ -1.86
PDS5AQ29RF7 OR5AK4P-201ENST00000635912 903 ntBASIC3.45□□□□□ -1.86
PDS5AQ29RF7 AC091152.2-201ENST00000591628 2569 ntBASIC3.45□□□□□ -1.86
PDS5AQ29RF7 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.45□□□□□ -1.86
PDS5AQ29RF7 AC005183.1-201ENST00000603687 1979 ntBASIC3.45□□□□□ -1.86
PDS5AQ29RF7 RNU6-114P-201ENST00000384704 105 ntBASIC3.44□□□□□ -1.86
PDS5AQ29RF7 AL360182.1-201ENST00000397433 468 ntBASIC3.44□□□□□ -1.86
PDS5AQ29RF7 MRPL42P2-201ENST00000403169 426 ntBASIC3.44□□□□□ -1.86
PDS5AQ29RF7 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC3.44□□□□□ -1.86
PDS5AQ29RF7 AC092447.6-201ENST00000414578 210 ntBASIC3.44□□□□□ -1.86
PDS5AQ29RF7 PIGFP2-201ENST00000421400 651 ntBASIC3.44□□□□□ -1.86
PDS5AQ29RF7 AC012498.1-201ENST00000424037 437 ntBASIC3.44□□□□□ -1.86
PDS5AQ29RF7 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC3.44□□□□□ -1.86
PDS5AQ29RF7 AC087499.2-201ENST00000432861 149 ntBASIC3.44□□□□□ -1.86
PDS5AQ29RF7 MTND3P21-201ENST00000433774 331 ntBASIC3.44□□□□□ -1.86
PDS5AQ29RF7 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC3.44□□□□□ -1.86
PDS5AQ29RF7 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC3.44□□□□□ -1.86
PDS5AQ29RF7 AF213884.2-201ENST00000510417 903 ntBASIC3.44□□□□□ -1.86
PDS5AQ29RF7 AC017037.2-201ENST00000513850 890 ntBASIC3.44□□□□□ -1.86
PDS5AQ29RF7 IGHV3-76-201ENST00000522465 295 ntBASIC3.44□□□□□ -1.86
PDS5AQ29RF7 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
PDS5AQ29RF7 AP000907.2-201ENST00000530827 353 ntBASIC3.44□□□□□ -1.86
PDS5AQ29RF7 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC3.44□□□□□ -1.86
PDS5AQ29RF7 AC079600.2-201ENST00000550076 130 ntBASIC3.44□□□□□ -1.86
PDS5AQ29RF7 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC3.44□□□□□ -1.86
PDS5AQ29RF7 OR4H12P-201ENST00000556269 907 ntBASIC3.44□□□□□ -1.86
PDS5AQ29RF7 AL356432.3-201ENST00000568952 465 ntBASIC3.44□□□□□ -1.86
PDS5AQ29RF7 RPL12P50-201ENST00000603116 116 ntBASIC3.44□□□□□ -1.86
PDS5AQ29RF7 HMGN2P28-201ENST00000606102 262 ntBASIC3.44□□□□□ -1.86
PDS5AQ29RF7 AC010338.1-201ENST00000621823 717 ntBASIC3.44□□□□□ -1.86
PDS5AQ29RF7 AC138649.3-201ENST00000622154 254 ntBASIC3.44□□□□□ -1.86
PDS5AQ29RF7 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC3.44□□□□□ -1.86
PDS5AQ29RF7 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
PDS5AQ29RF7 MFF-206ENST00000392059 1710 ntTSL 5 BASIC3.44□□□□□ -1.86
PDS5AQ29RF7 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC3.44□□□□□ -1.86
PDS5AQ29RF7 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
PDS5AQ29RF7 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC3.44□□□□□ -1.86
PDS5AQ29RF7 AC244517.1-201ENST00000606030 2086 ntBASIC3.44□□□□□ -1.86
PDS5AQ29RF7 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.44□□□□□ -1.86
PDS5AQ29RF7 RNU6-837P-201ENST00000391056 108 ntBASIC3.44□□□□□ -1.86
PDS5AQ29RF7 RPL23AP32-201ENST00000395315 459 ntBASIC3.44□□□□□ -1.86
PDS5AQ29RF7 MTND1P21-201ENST00000412991 285 ntBASIC3.44□□□□□ -1.86
PDS5AQ29RF7 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC3.44□□□□□ -1.86
PDS5AQ29RF7 NUP35P1-201ENST00000422734 947 ntBASIC3.44□□□□□ -1.86
PDS5AQ29RF7 MTND4LP10-201ENST00000435146 291 ntBASIC3.44□□□□□ -1.86
PDS5AQ29RF7 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.44□□□□□ -1.86
PDS5AQ29RF7 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC3.44□□□□□ -1.86
PDS5AQ29RF7 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC3.44□□□□□ -1.86
PDS5AQ29RF7 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC3.44□□□□□ -1.86
PDS5AQ29RF7 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC3.44□□□□□ -1.86
PDS5AQ29RF7 SNRPGP3-201ENST00000469405 227 ntBASIC3.44□□□□□ -1.86
PDS5AQ29RF7 RPS3AP17-201ENST00000472594 777 ntBASIC3.44□□□□□ -1.86
PDS5AQ29RF7 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC3.44□□□□□ -1.86
PDS5AQ29RF7 AC022483.1-201ENST00000514020 567 ntBASIC3.44□□□□□ -1.86
PDS5AQ29RF7 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC3.44□□□□□ -1.86
PDS5AQ29RF7 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC3.44□□□□□ -1.86
PDS5AQ29RF7 RNU6-506P-201ENST00000516553 94 ntBASIC3.44□□□□□ -1.86
PDS5AQ29RF7 IGHVII-62-1-201ENST00000519283 235 ntBASIC3.44□□□□□ -1.86
PDS5AQ29RF7 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC3.44□□□□□ -1.86
PDS5AQ29RF7 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
PDS5AQ29RF7 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 141 ms