Protein–RNA interactions for Protein: Q12770

SCAP, Sterol regulatory element-binding protein cleavage-activating protein, humanhuman

Predictions only

Length 1,279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPQ12770 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC4.03□□□□□ -1.76
SCAPQ12770 TRAPPC2P3-201ENST00000443200 321 ntBASIC4.03□□□□□ -1.76
SCAPQ12770 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC4.03□□□□□ -1.76
SCAPQ12770 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC4.03□□□□□ -1.76
SCAPQ12770 RPS24P6-201ENST00000452670 400 ntBASIC4.03□□□□□ -1.76
SCAPQ12770 AC007967.1-201ENST00000455422 1159 ntBASIC4.03□□□□□ -1.76
SCAPQ12770 AL590639.1-201ENST00000456484 337 ntBASIC4.03□□□□□ -1.76
SCAPQ12770 RPS29P15-201ENST00000458329 171 ntBASIC4.03□□□□□ -1.76
SCAPQ12770 RPS26P3-201ENST00000470205 348 ntBASIC4.03□□□□□ -1.76
SCAPQ12770 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC4.03□□□□□ -1.76
SCAPQ12770 AC090543.2-201ENST00000483963 348 ntBASIC4.03□□□□□ -1.76
SCAPQ12770 AC004057.1-201ENST00000485827 348 ntBASIC4.03□□□□□ -1.76
SCAPQ12770 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
SCAPQ12770 AC004062.1-201ENST00000509926 645 ntBASIC4.03□□□□□ -1.76
SCAPQ12770 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC4.03□□□□□ -1.76
SCAPQ12770 RNU6-1170P-201ENST00000515974 106 ntBASIC4.03□□□□□ -1.76
SCAPQ12770 RNU6-1045P-201ENST00000516321 107 ntBASIC4.03□□□□□ -1.76
SCAPQ12770 RNA5SP503-201ENST00000517047 117 ntBASIC4.03□□□□□ -1.76
SCAPQ12770 HMGB1P41-201ENST00000520234 440 ntBASIC4.03□□□□□ -1.76
SCAPQ12770 SUMO2P20-201ENST00000520803 283 ntBASIC4.03□□□□□ -1.76
SCAPQ12770 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC4.03□□□□□ -1.76
SCAPQ12770 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
SCAPQ12770 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
SCAPQ12770 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC4.03□□□□□ -1.76
SCAPQ12770 AP000942.4-201ENST00000604811 241 ntBASIC4.03□□□□□ -1.76
SCAPQ12770 AC021646.1-201ENST00000605469 484 ntBASIC4.03□□□□□ -1.76
SCAPQ12770 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
SCAPQ12770 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC4.03□□□□□ -1.76
SCAPQ12770 AL353748.2-201ENST00000622148 471 ntBASIC4.03□□□□□ -1.76
SCAPQ12770 C2orf27A-204ENST00000623058 969 ntBASIC4.03□□□□□ -1.76
SCAPQ12770 AL034408.1-202ENST00000636088 415 ntBASIC4.03□□□□□ -1.76
SCAPQ12770 U6.114-201ENST00000636407 96 ntBASIC4.03□□□□□ -1.76
SCAPQ12770 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
SCAPQ12770 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
SCAPQ12770 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.03□□□□□ -1.76
SCAPQ12770 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
SCAPQ12770 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC4.03□□□□□ -1.77
SCAPQ12770 MTND4P14-201ENST00000435799 1354 ntBASIC4.02□□□□□ -1.77
SCAPQ12770 LINC02471-203ENST00000641941 4752 ntBASIC4.02□□□□□ -1.77
SCAPQ12770 ZNF285B-201ENST00000561698 1767 ntBASIC4.02□□□□□ -1.77
SCAPQ12770 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.02□□□□□ -1.77
SCAPQ12770 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC4.02□□□□□ -1.77
SCAPQ12770 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
SCAPQ12770 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.02□□□□□ -1.77
SCAPQ12770 RNU6-552P-201ENST00000362869 119 ntBASIC4.02□□□□□ -1.77
SCAPQ12770 RNU6-511P-201ENST00000363496 107 ntBASIC4.02□□□□□ -1.77
SCAPQ12770 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
SCAPQ12770 RNU6-637P-201ENST00000384050 107 ntBASIC4.02□□□□□ -1.77
SCAPQ12770 RNU6-1013P-201ENST00000384180 107 ntBASIC4.02□□□□□ -1.77
SCAPQ12770 RNA5SP239-201ENST00000410218 129 ntBASIC4.02□□□□□ -1.77
SCAPQ12770 MTCO2P27-201ENST00000420740 428 ntBASIC4.02□□□□□ -1.77
SCAPQ12770 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC4.02□□□□□ -1.77
SCAPQ12770 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC4.02□□□□□ -1.77
SCAPQ12770 AC024082.2-201ENST00000434771 238 ntBASIC4.02□□□□□ -1.77
SCAPQ12770 RPL36AP6-201ENST00000435770 321 ntBASIC4.02□□□□□ -1.77
SCAPQ12770 RPL35AP22-201ENST00000436855 335 ntBASIC4.02□□□□□ -1.77
SCAPQ12770 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC4.02□□□□□ -1.77
SCAPQ12770 AC096576.1-201ENST00000489014 359 ntBASIC4.02□□□□□ -1.77
SCAPQ12770 MTCO1P29-201ENST00000496868 288 ntBASIC4.02□□□□□ -1.77
SCAPQ12770 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC4.02□□□□□ -1.77
SCAPQ12770 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC4.02□□□□□ -1.77
SCAPQ12770 AC023141.12-201ENST00000512399 199 ntBASIC4.02□□□□□ -1.77
SCAPQ12770 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
SCAPQ12770 AC109635.4-202ENST00000531666 412 ntBASIC4.02□□□□□ -1.77
SCAPQ12770 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC4.02□□□□□ -1.77
SCAPQ12770 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC4.02□□□□□ -1.77
SCAPQ12770 AC090877.1-201ENST00000561418 344 ntBASIC4.02□□□□□ -1.77
SCAPQ12770 AC026464.5-201ENST00000562497 722 ntBASIC4.02□□□□□ -1.77
SCAPQ12770 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC4.02□□□□□ -1.77
SCAPQ12770 MIR4775-201ENST00000581168 75 ntBASIC4.02□□□□□ -1.77
SCAPQ12770 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC4.02□□□□□ -1.77
SCAPQ12770 AL022099.1-201ENST00000604551 712 ntBASIC4.02□□□□□ -1.77
SCAPQ12770 AP001836.1-201ENST00000604675 523 ntBASIC4.02□□□□□ -1.77
SCAPQ12770 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC4.02□□□□□ -1.77
SCAPQ12770 MIR6130-201ENST00000619419 109 ntBASIC4.02□□□□□ -1.77
SCAPQ12770 AC015967.1-201ENST00000619893 476 ntBASIC4.02□□□□□ -1.77
SCAPQ12770 AC090971.5-201ENST00000621102 293 ntBASIC4.02□□□□□ -1.77
SCAPQ12770 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC4.02□□□□□ -1.77
SCAPQ12770 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
SCAPQ12770 AC068254.2-201ENST00000623938 3577 ntBASIC4.02□□□□□ -1.77
SCAPQ12770 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC4.02□□□□□ -1.77
SCAPQ12770 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC4.02□□□□□ -1.77
SCAPQ12770 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.01□□□□□ -1.77
SCAPQ12770 AP001350.1-201ENST00000601906 1524 ntBASIC4.01□□□□□ -1.77
SCAPQ12770 AL133412.1-201ENST00000380194 2992 ntBASIC4.01□□□□□ -1.77
SCAPQ12770 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC4.01□□□□□ -1.77
SCAPQ12770 OSBPL9P4-201ENST00000371707 1800 ntBASIC4.01□□□□□ -1.77
SCAPQ12770 AL139276.1-201ENST00000311910 1001 ntBASIC4.01□□□□□ -1.77
SCAPQ12770 Y_RNA.138-201ENST00000363462 102 ntBASIC4.01□□□□□ -1.77
SCAPQ12770 RNA5SP72-201ENST00000364442 117 ntBASIC4.01□□□□□ -1.77
SCAPQ12770 Y_RNA.373-201ENST00000365600 103 ntBASIC4.01□□□□□ -1.77
SCAPQ12770 RNU4-20P-201ENST00000365601 151 ntBASIC4.01□□□□□ -1.77
SCAPQ12770 U1.1-201ENST00000384101 164 ntBASIC4.01□□□□□ -1.77
SCAPQ12770 Y_RNA.530-201ENST00000384587 101 ntBASIC4.01□□□□□ -1.77
SCAPQ12770 MIR218-2-201ENST00000385006 110 ntBASIC4.01□□□□□ -1.77
SCAPQ12770 RNU6-903P-201ENST00000391270 109 ntBASIC4.01□□□□□ -1.77
SCAPQ12770 RNU2-43P-201ENST00000410306 190 ntBASIC4.01□□□□□ -1.77
SCAPQ12770 SNORA57.3-201ENST00000411095 141 ntBASIC4.01□□□□□ -1.77
SCAPQ12770 RNU6-516P-201ENST00000411381 104 ntBASIC4.01□□□□□ -1.77
SCAPQ12770 SSXP9-201ENST00000417503 292 ntBASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 136.8 ms