Protein–RNA interactions for Protein: Q06643

LTB, Lymphotoxin-beta, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBQ06643 RPL35AP12-201ENST00000425362 338 ntBASIC3.37□□□□□ -1.87
LTBQ06643 PSMA2P3-201ENST00000429685 675 ntBASIC3.37□□□□□ -1.87
LTBQ06643 MTATP6P16-201ENST00000434543 526 ntBASIC3.37□□□□□ -1.87
LTBQ06643 NDUFB1P1-201ENST00000435191 180 ntBASIC3.37□□□□□ -1.87
LTBQ06643 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC3.37□□□□□ -1.87
LTBQ06643 DDX3P2-201ENST00000446138 111 ntBASIC3.37□□□□□ -1.87
LTBQ06643 MRPL50P4-201ENST00000446432 475 ntBASIC3.37□□□□□ -1.87
LTBQ06643 AC006480.1-201ENST00000449887 378 ntBASIC3.37□□□□□ -1.87
LTBQ06643 Vault.1-201ENST00000516474 102 ntBASIC3.37□□□□□ -1.87
LTBQ06643 RN7SKP209-201ENST00000516888 304 ntBASIC3.37□□□□□ -1.87
LTBQ06643 RNU6-798P-201ENST00000516912 103 ntBASIC3.37□□□□□ -1.87
LTBQ06643 AC105029.1-201ENST00000520250 669 ntBASIC3.37□□□□□ -1.87
LTBQ06643 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC3.37□□□□□ -1.87
LTBQ06643 AL133271.1-201ENST00000538229 291 ntBASIC3.37□□□□□ -1.87
LTBQ06643 AC008011.1-201ENST00000545989 227 ntBASIC3.37□□□□□ -1.87
LTBQ06643 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC3.37□□□□□ -1.87
LTBQ06643 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.37□□□□□ -1.87
LTBQ06643 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC3.37□□□□□ -1.87
LTBQ06643 COX6CP3-201ENST00000580869 223 ntBASIC3.37□□□□□ -1.87
LTBQ06643 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.37□□□□□ -1.87
LTBQ06643 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.37□□□□□ -1.87
LTBQ06643 AC110741.2-201ENST00000605278 268 ntBASIC3.37□□□□□ -1.87
LTBQ06643 FRG1KP-201ENST00000623592 341 ntBASIC3.37□□□□□ -1.87
LTBQ06643 AC040168.1-201ENST00000623594 991 ntBASIC3.37□□□□□ -1.87
LTBQ06643 AL136313.1-201ENST00000624804 202 ntBASIC3.37□□□□□ -1.87
LTBQ06643 VPS8-228ENST00000628962 207 ntTSL 5 BASIC3.37□□□□□ -1.87
LTBQ06643 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.37□□□□□ -1.87
LTBQ06643 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC3.37□□□□□ -1.87
LTBQ06643 ATP8A2P2-201ENST00000437678 1568 ntBASIC3.37□□□□□ -1.87
LTBQ06643 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC3.37□□□□□ -1.87
LTBQ06643 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.37□□□□□ -1.87
LTBQ06643 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
LTBQ06643 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
LTBQ06643 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
LTBQ06643 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC3.36□□□□□ -1.87
LTBQ06643 FRG1CP-201ENST00000358464 769 ntBASIC3.36□□□□□ -1.87
LTBQ06643 RNU4-20P-201ENST00000365601 151 ntBASIC3.36□□□□□ -1.87
LTBQ06643 SNORA32.2-201ENST00000384049 122 ntBASIC3.36□□□□□ -1.87
LTBQ06643 MIR558-201ENST00000384920 94 ntBASIC3.36□□□□□ -1.87
LTBQ06643 MIR128-1-201ENST00000384921 82 ntBASIC3.36□□□□□ -1.87
LTBQ06643 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
LTBQ06643 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
LTBQ06643 RNA5SP424-201ENST00000390988 115 ntBASIC3.36□□□□□ -1.87
LTBQ06643 Y_RNA.615-201ENST00000410769 117 ntBASIC3.36□□□□□ -1.87
LTBQ06643 MTCO3P46-201ENST00000425787 232 ntBASIC3.36□□□□□ -1.87
LTBQ06643 AL159987.2-201ENST00000432754 307 ntBASIC3.36□□□□□ -1.87
LTBQ06643 RPL23AP33-201ENST00000442301 452 ntBASIC3.36□□□□□ -1.87
LTBQ06643 AL590399.6-201ENST00000446396 307 ntBASIC3.36□□□□□ -1.87
LTBQ06643 RPL7P12-201ENST00000446719 750 ntBASIC3.36□□□□□ -1.87
LTBQ06643 GMFBP1-201ENST00000467831 427 ntBASIC3.36□□□□□ -1.87
LTBQ06643 AC068305.1-201ENST00000497406 726 ntBASIC3.36□□□□□ -1.87
LTBQ06643 RPL38P4-201ENST00000502376 214 ntBASIC3.36□□□□□ -1.87
LTBQ06643 MTCO3P9-201ENST00000506989 781 ntBASIC3.36□□□□□ -1.87
LTBQ06643 AC004062.1-201ENST00000509926 645 ntBASIC3.36□□□□□ -1.87
LTBQ06643 SCARNA15.1-201ENST00000516384 125 ntBASIC3.36□□□□□ -1.87
LTBQ06643 RNA5SP164-201ENST00000516533 110 ntBASIC3.36□□□□□ -1.87
LTBQ06643 BTF3P12-201ENST00000519620 469 ntBASIC3.36□□□□□ -1.87
LTBQ06643 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC3.36□□□□□ -1.87
LTBQ06643 AC128657.1-201ENST00000549459 145 ntBASIC3.36□□□□□ -1.87
LTBQ06643 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC3.36□□□□□ -1.87
LTBQ06643 AL121576.1-201ENST00000556055 276 ntBASIC3.36□□□□□ -1.87
LTBQ06643 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.36□□□□□ -1.87
LTBQ06643 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC3.36□□□□□ -1.87
LTBQ06643 RNU1-30P-201ENST00000606575 163 ntBASIC3.36□□□□□ -1.87
LTBQ06643 AC064836.2-201ENST00000609491 462 ntBASIC3.36□□□□□ -1.87
LTBQ06643 AC005344.1-201ENST00000613391 459 ntBASIC3.36□□□□□ -1.87
LTBQ06643 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.36□□□□□ -1.87
LTBQ06643 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
LTBQ06643 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
LTBQ06643 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
LTBQ06643 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
LTBQ06643 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
LTBQ06643 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
LTBQ06643 ASNSP3-201ENST00000451989 1306 ntBASIC3.36□□□□□ -1.87
LTBQ06643 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
LTBQ06643 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.36□□□□□ -1.87
LTBQ06643 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.36□□□□□ -1.87
LTBQ06643 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
LTBQ06643 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.35□□□□□ -1.87
LTBQ06643 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
LTBQ06643 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
LTBQ06643 ZNF734P-201ENST00000419494 1534 ntBASIC3.35□□□□□ -1.87
LTBQ06643 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.35□□□□□ -1.87
LTBQ06643 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
LTBQ06643 MAPK10-372ENST00000641954 3413 ntBASIC3.35□□□□□ -1.87
LTBQ06643 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
LTBQ06643 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
LTBQ06643 RNU6-511P-201ENST00000363496 107 ntBASIC3.35□□□□□ -1.87
LTBQ06643 U3.11-201ENST00000364476 212 ntBASIC3.35□□□□□ -1.87
LTBQ06643 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC3.35□□□□□ -1.87
LTBQ06643 Y_RNA.394-201ENST00000383942 103 ntBASIC3.35□□□□□ -1.87
LTBQ06643 RNU6-339P-201ENST00000384310 107 ntBASIC3.35□□□□□ -1.87
LTBQ06643 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
LTBQ06643 AL391417.1-201ENST00000404100 426 ntBASIC3.35□□□□□ -1.87
LTBQ06643 RNU2-47P-201ENST00000410649 186 ntBASIC3.35□□□□□ -1.87
LTBQ06643 RNU2-62P-201ENST00000410868 191 ntBASIC3.35□□□□□ -1.87
LTBQ06643 HMGN1P24-201ENST00000412282 298 ntBASIC3.35□□□□□ -1.87
LTBQ06643 RPL30P2-201ENST00000414021 291 ntBASIC3.35□□□□□ -1.87
LTBQ06643 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC3.35□□□□□ -1.87
LTBQ06643 AC018630.2-202ENST00000422992 927 ntBASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 122.6 ms