Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC2.89□□□□□ -1.95
CX3CL1P78423 NOTCH2P1-201ENST00000443481 624 ntBASIC2.89□□□□□ -1.95
CX3CL1P78423 PSPHP1-201ENST00000450062 261 ntBASIC2.89□□□□□ -1.95
CX3CL1P78423 DCLRE1CP1-201ENST00000454630 470 ntBASIC2.89□□□□□ -1.95
CX3CL1P78423 AC093899.1-201ENST00000457984 376 ntBASIC2.89□□□□□ -1.95
CX3CL1P78423 RPL39P36-201ENST00000490784 156 ntBASIC2.89□□□□□ -1.95
CX3CL1P78423 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC2.89□□□□□ -1.95
CX3CL1P78423 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC2.89□□□□□ -1.95
CX3CL1P78423 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC2.89□□□□□ -1.95
CX3CL1P78423 Y_RNA.689-201ENST00000516589 107 ntBASIC2.89□□□□□ -1.95
CX3CL1P78423 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC2.89□□□□□ -1.95
CX3CL1P78423 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC2.89□□□□□ -1.95
CX3CL1P78423 AC007991.1-201ENST00000522680 631 ntBASIC2.89□□□□□ -1.95
CX3CL1P78423 AC103843.2-201ENST00000530523 682 ntBASIC2.89□□□□□ -1.95
CX3CL1P78423 OR5AL2P-201ENST00000532185 920 ntBASIC2.89□□□□□ -1.95
CX3CL1P78423 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
CX3CL1P78423 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC2.89□□□□□ -1.95
CX3CL1P78423 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC2.89□□□□□ -1.95
CX3CL1P78423 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC2.89□□□□□ -1.95
CX3CL1P78423 HMGB1P6-201ENST00000569046 646 ntBASIC2.89□□□□□ -1.95
CX3CL1P78423 AC006504.3-201ENST00000586818 523 ntBASIC2.89□□□□□ -1.95
CX3CL1P78423 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC2.89□□□□□ -1.95
CX3CL1P78423 AL020997.2-201ENST00000602607 184 ntBASIC2.89□□□□□ -1.95
CX3CL1P78423 AC174048.1-201ENST00000603389 144 ntBASIC2.89□□□□□ -1.95
CX3CL1P78423 AC004492.1-201ENST00000607036 742 ntBASIC2.89□□□□□ -1.95
CX3CL1P78423 AC008536.2-201ENST00000607284 349 ntBASIC2.89□□□□□ -1.95
CX3CL1P78423 AC092954.2-201ENST00000609103 430 ntBASIC2.89□□□□□ -1.95
CX3CL1P78423 MIR6798-201ENST00000612887 67 ntBASIC2.89□□□□□ -1.95
CX3CL1P78423 AC012409.4-201ENST00000612923 249 ntBASIC2.89□□□□□ -1.95
CX3CL1P78423 AL157786.1-207ENST00000627771 695 ntBASIC2.89□□□□□ -1.95
CX3CL1P78423 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC2.89□□□□□ -1.95
CX3CL1P78423 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC2.89□□□□□ -1.95
CX3CL1P78423 API5P2-201ENST00000397055 1498 ntBASIC2.89□□□□□ -1.95
CX3CL1P78423 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC2.89□□□□□ -1.95
CX3CL1P78423 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC2.88□□□□□ -1.95
CX3CL1P78423 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC2.88□□□□□ -1.95
CX3CL1P78423 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC2.88□□□□□ -1.95
CX3CL1P78423 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
CX3CL1P78423 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
CX3CL1P78423 RNU6-270P-201ENST00000364131 105 ntBASIC2.88□□□□□ -1.95
CX3CL1P78423 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC2.88□□□□□ -1.95
CX3CL1P78423 RFX3-203ENST00000381984 364 ntTSL 3 BASIC2.88□□□□□ -1.95
CX3CL1P78423 Y_RNA.409-201ENST00000383990 98 ntBASIC2.88□□□□□ -1.95
CX3CL1P78423 RNU6-217P-201ENST00000384164 104 ntBASIC2.88□□□□□ -1.95
CX3CL1P78423 AL136116.1-201ENST00000403591 381 ntBASIC2.88□□□□□ -1.95
CX3CL1P78423 RNU6-55P-201ENST00000411092 107 ntBASIC2.88□□□□□ -1.95
CX3CL1P78423 RNU6-954P-201ENST00000411355 107 ntBASIC2.88□□□□□ -1.95
CX3CL1P78423 AL031779.1-201ENST00000415663 330 ntBASIC2.88□□□□□ -1.95
CX3CL1P78423 AL035423.1-201ENST00000420331 213 ntBASIC2.88□□□□□ -1.95
CX3CL1P78423 ISCA1P1-201ENST00000426679 387 ntBASIC2.88□□□□□ -1.95
CX3CL1P78423 ZNF863P-201ENST00000426746 417 ntBASIC2.88□□□□□ -1.95
CX3CL1P78423 DPPA2P1-201ENST00000428060 556 ntBASIC2.88□□□□□ -1.95
CX3CL1P78423 ELOCP14-201ENST00000428070 331 ntBASIC2.88□□□□□ -1.95
CX3CL1P78423 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC2.88□□□□□ -1.95
CX3CL1P78423 AL445584.1-201ENST00000431451 330 ntBASIC2.88□□□□□ -1.95
CX3CL1P78423 HMGN2P20-201ENST00000437531 273 ntBASIC2.88□□□□□ -1.95
CX3CL1P78423 ELOCP7-201ENST00000439968 331 ntBASIC2.88□□□□□ -1.95
CX3CL1P78423 AC093392.2-201ENST00000450682 337 ntBASIC2.88□□□□□ -1.95
CX3CL1P78423 FABP5P15-201ENST00000453566 214 ntBASIC2.88□□□□□ -1.95
CX3CL1P78423 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC2.88□□□□□ -1.95
CX3CL1P78423 RPS29P15-201ENST00000458329 171 ntBASIC2.88□□□□□ -1.95
CX3CL1P78423 AC010401.1-201ENST00000463867 348 ntBASIC2.88□□□□□ -1.95
CX3CL1P78423 AC084357.1-201ENST00000473404 255 ntBASIC2.88□□□□□ -1.95
CX3CL1P78423 RPS4XP22-201ENST00000480755 780 ntBASIC2.88□□□□□ -1.95
CX3CL1P78423 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC2.88□□□□□ -1.95
CX3CL1P78423 RNU6-123P-201ENST00000516163 102 ntBASIC2.88□□□□□ -1.95
CX3CL1P78423 RNU6-928P-201ENST00000516876 104 ntBASIC2.88□□□□□ -1.95
CX3CL1P78423 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC2.88□□□□□ -1.95
CX3CL1P78423 NDUFB9P3-201ENST00000521269 501 ntBASIC2.88□□□□□ -1.95
CX3CL1P78423 AP003034.1-201ENST00000534621 422 ntBASIC2.88□□□□□ -1.95
CX3CL1P78423 AC011602.1-201ENST00000546484 331 ntBASIC2.88□□□□□ -1.95
CX3CL1P78423 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC2.88□□□□□ -1.95
CX3CL1P78423 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC2.88□□□□□ -1.95
CX3CL1P78423 AC005951.1-201ENST00000576706 485 ntBASIC2.88□□□□□ -1.95
CX3CL1P78423 MIR3609-201ENST00000582661 80 ntBASIC2.88□□□□□ -1.95
CX3CL1P78423 AC010591.1-201ENST00000603941 649 ntBASIC2.88□□□□□ -1.95
CX3CL1P78423 AF250324.2-201ENST00000608299 610 ntBASIC2.88□□□□□ -1.95
CX3CL1P78423 AC017083.3-201ENST00000609955 700 ntBASIC2.88□□□□□ -1.95
CX3CL1P78423 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC2.88□□□□□ -1.95
CX3CL1P78423 AC006111.3-201ENST00000622137 383 ntBASIC2.88□□□□□ -1.95
CX3CL1P78423 AC139792.3-201ENST00000623525 224 ntBASIC2.88□□□□□ -1.95
CX3CL1P78423 CR381653.2-201ENST00000624041 768 ntBASIC2.88□□□□□ -1.95
CX3CL1P78423 AC005609.4-201ENST00000625071 447 ntBASIC2.88□□□□□ -1.95
CX3CL1P78423 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC2.88□□□□□ -1.95
CX3CL1P78423 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC2.88□□□□□ -1.95
CX3CL1P78423 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC2.88□□□□□ -1.95
CX3CL1P78423 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC2.88□□□□□ -1.95
CX3CL1P78423 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
CX3CL1P78423 MFSD8-236ENST00000641509 4050 ntBASIC2.88□□□□□ -1.95
CX3CL1P78423 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
CX3CL1P78423 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC2.88□□□□□ -1.95
CX3CL1P78423 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
CX3CL1P78423 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC2.88□□□□□ -1.95
CX3CL1P78423 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
CX3CL1P78423 ZNF826P-207ENST00000622273 1910 ntBASIC2.87□□□□□ -1.95
CX3CL1P78423 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC2.87□□□□□ -1.95
CX3CL1P78423 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC2.87□□□□□ -1.95
CX3CL1P78423 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
CX3CL1P78423 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
CX3CL1P78423 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 264.2 ms