Protein–RNA interactions for Protein: P78395

PRAME, Melanoma antigen preferentially expressed in tumors, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEP78395 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC3.28□□□□□ -1.88
PRAMEP78395 AC034102.8-201ENST00000615146 484 ntBASIC3.28□□□□□ -1.88
PRAMEP78395 AL138880.2-201ENST00000616214 239 ntBASIC3.28□□□□□ -1.88
PRAMEP78395 AC006133.1-201ENST00000617106 264 ntBASIC3.28□□□□□ -1.88
PRAMEP78395 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC3.28□□□□□ -1.88
PRAMEP78395 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC3.28□□□□□ -1.88
PRAMEP78395 AC073308.1-201ENST00000623696 305 ntBASIC3.28□□□□□ -1.88
PRAMEP78395 AC073476.4-201ENST00000628409 72 ntBASIC3.28□□□□□ -1.88
PRAMEP78395 AP003399.1-201ENST00000637534 361 ntBASIC3.28□□□□□ -1.88
PRAMEP78395 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.28□□□□□ -1.88
PRAMEP78395 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
PRAMEP78395 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
PRAMEP78395 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
PRAMEP78395 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
PRAMEP78395 HSPE1P11-201ENST00000339579 310 ntBASIC3.27□□□□□ -1.89
PRAMEP78395 FTLP6-201ENST00000355274 422 ntBASIC3.27□□□□□ -1.89
PRAMEP78395 MIR148B-201ENST00000362252 99 ntBASIC3.27□□□□□ -1.89
PRAMEP78395 Y_RNA.245-201ENST00000364493 95 ntBASIC3.27□□□□□ -1.89
PRAMEP78395 RNU6-169P-201ENST00000365336 107 ntBASIC3.27□□□□□ -1.89
PRAMEP78395 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC3.27□□□□□ -1.89
PRAMEP78395 DEFB108C-201ENST00000400154 252 ntBASIC3.27□□□□□ -1.89
PRAMEP78395 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
PRAMEP78395 ZNF90P2-204ENST00000419323 1075 ntBASIC3.27□□□□□ -1.89
PRAMEP78395 AC099548.1-201ENST00000421443 426 ntBASIC3.27□□□□□ -1.89
PRAMEP78395 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
PRAMEP78395 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC3.27□□□□□ -1.89
PRAMEP78395 OR2AS1P-201ENST00000427827 319 ntBASIC3.27□□□□□ -1.89
PRAMEP78395 DPPA2P1-201ENST00000428060 556 ntBASIC3.27□□□□□ -1.89
PRAMEP78395 AC005019.1-201ENST00000436455 431 ntBASIC3.27□□□□□ -1.89
PRAMEP78395 AL353706.1-201ENST00000436728 494 ntBASIC3.27□□□□□ -1.89
PRAMEP78395 RPL23AP22-201ENST00000437556 453 ntBASIC3.27□□□□□ -1.89
PRAMEP78395 ATP5C1P1-201ENST00000441945 895 ntBASIC3.27□□□□□ -1.89
PRAMEP78395 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.27□□□□□ -1.89
PRAMEP78395 AC115115.1-201ENST00000449927 248 ntBASIC3.27□□□□□ -1.89
PRAMEP78395 CECR9-201ENST00000453421 199 ntBASIC3.27□□□□□ -1.89
PRAMEP78395 SNORA84-201ENST00000459229 133 ntBASIC3.27□□□□□ -1.89
PRAMEP78395 RPL37P6-201ENST00000460682 294 ntBASIC3.27□□□□□ -1.89
PRAMEP78395 AC091179.1-201ENST00000461606 579 ntBASIC3.27□□□□□ -1.89
PRAMEP78395 AC087588.1-201ENST00000462203 316 ntBASIC3.27□□□□□ -1.89
PRAMEP78395 FTH1P2-201ENST00000466086 412 ntBASIC3.27□□□□□ -1.89
PRAMEP78395 RN7SL293P-201ENST00000481765 281 ntBASIC3.27□□□□□ -1.89
PRAMEP78395 AC105252.1-201ENST00000503089 286 ntBASIC3.27□□□□□ -1.89
PRAMEP78395 KCTD9P5-201ENST00000504141 1170 ntBASIC3.27□□□□□ -1.89
PRAMEP78395 AC026427.2-201ENST00000506228 536 ntBASIC3.27□□□□□ -1.89
PRAMEP78395 SNORA31.3-201ENST00000516029 96 ntBASIC3.27□□□□□ -1.89
PRAMEP78395 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC3.27□□□□□ -1.89
PRAMEP78395 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
PRAMEP78395 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC3.27□□□□□ -1.89
PRAMEP78395 AC087883.1-201ENST00000551882 391 ntBASIC3.27□□□□□ -1.89
PRAMEP78395 RPL21P12-201ENST00000559810 515 ntBASIC3.27□□□□□ -1.89
PRAMEP78395 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC3.27□□□□□ -1.89
PRAMEP78395 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC3.27□□□□□ -1.89
PRAMEP78395 AMZ2P1-203ENST00000565833 850 ntBASIC3.27□□□□□ -1.89
PRAMEP78395 HMGB1P6-201ENST00000569046 646 ntBASIC3.27□□□□□ -1.89
PRAMEP78395 GLUD1P4-201ENST00000590914 418 ntBASIC3.27□□□□□ -1.89
PRAMEP78395 AL133393.1-201ENST00000603277 287 ntBASIC3.27□□□□□ -1.89
PRAMEP78395 AC136601.2-201ENST00000604356 474 ntBASIC3.27□□□□□ -1.89
PRAMEP78395 AP002360.4-201ENST00000606980 481 ntBASIC3.27□□□□□ -1.89
PRAMEP78395 AC009509.4-201ENST00000619202 509 ntBASIC3.27□□□□□ -1.89
PRAMEP78395 AC244100.1-202ENST00000621554 382 ntBASIC3.27□□□□□ -1.89
PRAMEP78395 LRRC77P-213ENST00000637727 880 ntBASIC3.27□□□□□ -1.89
PRAMEP78395 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
PRAMEP78395 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
PRAMEP78395 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
PRAMEP78395 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.26□□□□□ -1.89
PRAMEP78395 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
PRAMEP78395 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC3.26□□□□□ -1.89
PRAMEP78395 RNU6-960P-201ENST00000364056 120 ntBASIC3.26□□□□□ -1.89
PRAMEP78395 SNORA14A-201ENST00000364773 135 ntBASIC3.26□□□□□ -1.89
PRAMEP78395 DYNLT3P1-201ENST00000378574 347 ntBASIC3.26□□□□□ -1.89
PRAMEP78395 CDK8P2-201ENST00000415020 547 ntBASIC3.26□□□□□ -1.89
PRAMEP78395 ZNF863P-201ENST00000426746 417 ntBASIC3.26□□□□□ -1.89
PRAMEP78395 OR2B8P-201ENST00000432841 938 ntBASIC3.26□□□□□ -1.89
PRAMEP78395 HMGB3P12-201ENST00000438745 556 ntBASIC3.26□□□□□ -1.89
PRAMEP78395 PRDX3P3-201ENST00000447765 522 ntBASIC3.26□□□□□ -1.89
PRAMEP78395 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
PRAMEP78395 RPL21P13-201ENST00000488305 481 ntBASIC3.26□□□□□ -1.89
PRAMEP78395 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.26□□□□□ -1.89
PRAMEP78395 MTCO3P28-201ENST00000513351 515 ntBASIC3.26□□□□□ -1.89
PRAMEP78395 SNORA67.7-201ENST00000516664 135 ntBASIC3.26□□□□□ -1.89
PRAMEP78395 RNA5SP380-201ENST00000517190 98 ntBASIC3.26□□□□□ -1.89
PRAMEP78395 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC3.26□□□□□ -1.89
PRAMEP78395 RPS3AP4-201ENST00000555161 764 ntBASIC3.26□□□□□ -1.89
PRAMEP78395 HMGB1P14-201ENST00000557424 591 ntBASIC3.26□□□□□ -1.89
PRAMEP78395 NCAPGP2-201ENST00000557911 754 ntBASIC3.26□□□□□ -1.89
PRAMEP78395 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC3.26□□□□□ -1.89
PRAMEP78395 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.26□□□□□ -1.89
PRAMEP78395 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.26□□□□□ -1.89
PRAMEP78395 AL161798.1-201ENST00000604630 131 ntBASIC3.26□□□□□ -1.89
PRAMEP78395 AL161729.4-201ENST00000604650 476 ntBASIC3.26□□□□□ -1.89
PRAMEP78395 AC245389.1-201ENST00000605141 529 ntBASIC3.26□□□□□ -1.89
PRAMEP78395 AC073657.2-201ENST00000605661 303 ntBASIC3.26□□□□□ -1.89
PRAMEP78395 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.26□□□□□ -1.89
PRAMEP78395 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.26□□□□□ -1.89
PRAMEP78395 AC091903.1-201ENST00000624322 454 ntBASIC3.26□□□□□ -1.89
PRAMEP78395 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.26□□□□□ -1.89
PRAMEP78395 CR848007.1-201ENST00000442354 1699 ntBASIC3.26□□□□□ -1.89
PRAMEP78395 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
PRAMEP78395 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.25□□□□□ -1.89
PRAMEP78395 AC103988.1-201ENST00000566382 2177 ntBASIC3.25□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 97.6 ms