Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 AC009233.1-201ENST00000616477 371 ntBASIC2.82□□□□□ -1.96
LMO4P61968 MIR8057-201ENST00000620957 69 ntBASIC2.82□□□□□ -1.96
LMO4P61968 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC2.82□□□□□ -1.96
LMO4P61968 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC2.82□□□□□ -1.96
LMO4P61968 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC2.82□□□□□ -1.96
LMO4P61968 ZNF680P1-201ENST00000436625 1469 ntBASIC2.82□□□□□ -1.96
LMO4P61968 AC032011.1-201ENST00000611703 1549 ntBASIC2.82□□□□□ -1.96
LMO4P61968 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
LMO4P61968 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
LMO4P61968 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC2.81□□□□□ -1.96
LMO4P61968 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC2.81□□□□□ -1.96
LMO4P61968 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
LMO4P61968 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
LMO4P61968 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC2.81□□□□□ -1.96
LMO4P61968 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC2.81□□□□□ -1.96
LMO4P61968 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
LMO4P61968 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC2.81□□□□□ -1.96
LMO4P61968 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC2.81□□□□□ -1.96
LMO4P61968 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC2.81□□□□□ -1.96
LMO4P61968 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
LMO4P61968 FRG1BP-201ENST00000278882 761 ntBASIC2.81□□□□□ -1.96
LMO4P61968 AL161781.1-201ENST00000354277 403 ntBASIC2.81□□□□□ -1.96
LMO4P61968 RNU6-28P-201ENST00000362378 107 ntBASIC2.81□□□□□ -1.96
LMO4P61968 Y_RNA.72-201ENST00000362894 103 ntBASIC2.81□□□□□ -1.96
LMO4P61968 RNU1-18P-201ENST00000363062 164 ntBASIC2.81□□□□□ -1.96
LMO4P61968 Y_RNA.142-201ENST00000363491 102 ntBASIC2.81□□□□□ -1.96
LMO4P61968 RNU6-173P-201ENST00000364215 104 ntBASIC2.81□□□□□ -1.96
LMO4P61968 RNU6-359P-201ENST00000365466 108 ntBASIC2.81□□□□□ -1.96
LMO4P61968 SNORA20.2-201ENST00000383922 131 ntBASIC2.81□□□□□ -1.96
LMO4P61968 AL391417.1-201ENST00000404100 426 ntBASIC2.81□□□□□ -1.96
LMO4P61968 HMGN1P24-201ENST00000412282 298 ntBASIC2.81□□□□□ -1.96
LMO4P61968 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC2.81□□□□□ -1.96
LMO4P61968 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC2.81□□□□□ -1.96
LMO4P61968 AC007283.2-201ENST00000424739 197 ntBASIC2.81□□□□□ -1.96
LMO4P61968 AC079780.1-201ENST00000428259 207 ntBASIC2.81□□□□□ -1.96
LMO4P61968 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC2.81□□□□□ -1.96
LMO4P61968 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC2.81□□□□□ -1.96
LMO4P61968 SEPT14P3-201ENST00000439401 183 ntBASIC2.81□□□□□ -1.96
LMO4P61968 RPS15AP9-201ENST00000439856 381 ntBASIC2.81□□□□□ -1.96
LMO4P61968 AL732372.2-207ENST00000445840 183 ntBASIC2.81□□□□□ -1.96
LMO4P61968 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC2.81□□□□□ -1.96
LMO4P61968 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC2.81□□□□□ -1.96
LMO4P61968 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC2.81□□□□□ -1.96
LMO4P61968 SEPT14P2-201ENST00000453405 183 ntBASIC2.81□□□□□ -1.96
LMO4P61968 RPL23AP31-201ENST00000456160 467 ntBASIC2.81□□□□□ -1.96
LMO4P61968 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC2.81□□□□□ -1.96
LMO4P61968 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC2.81□□□□□ -1.96
LMO4P61968 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC2.81□□□□□ -1.96
LMO4P61968 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC2.81□□□□□ -1.96
LMO4P61968 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC2.81□□□□□ -1.96
LMO4P61968 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC2.81□□□□□ -1.96
LMO4P61968 NAF1-205ENST00000509434 385 ntTSL 3 BASIC2.81□□□□□ -1.96
LMO4P61968 TXNP6-201ENST00000510190 310 ntBASIC2.81□□□□□ -1.96
LMO4P61968 SEPT14P4-201ENST00000513445 186 ntBASIC2.81□□□□□ -1.96
LMO4P61968 AC093677.1-201ENST00000514414 678 ntBASIC2.81□□□□□ -1.96
LMO4P61968 FO082796.1-201ENST00000523795 183 ntBASIC2.81□□□□□ -1.96
LMO4P61968 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
LMO4P61968 SNRPGP16-201ENST00000533275 226 ntBASIC2.81□□□□□ -1.96
LMO4P61968 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
LMO4P61968 CR383656.7-201ENST00000548164 174 ntBASIC2.81□□□□□ -1.96
LMO4P61968 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC2.81□□□□□ -1.96
LMO4P61968 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC2.81□□□□□ -1.96
LMO4P61968 AL356432.3-201ENST00000568952 465 ntBASIC2.81□□□□□ -1.96
LMO4P61968 AC090615.1-201ENST00000577519 154 ntBASIC2.81□□□□□ -1.96
LMO4P61968 AP001429.1-201ENST00000602568 530 ntBASIC2.81□□□□□ -1.96
LMO4P61968 AC025449.1-201ENST00000603896 529 ntBASIC2.81□□□□□ -1.96
LMO4P61968 AC121334.2-201ENST00000605387 271 ntBASIC2.81□□□□□ -1.96
LMO4P61968 AC005000.2-201ENST00000605468 310 ntBASIC2.81□□□□□ -1.96
LMO4P61968 HMGB1P50-201ENST00000605814 607 ntBASIC2.81□□□□□ -1.96
LMO4P61968 AC103710.3-201ENST00000608157 948 ntBASIC2.81□□□□□ -1.96
LMO4P61968 AL355472.4-201ENST00000610233 626 ntBASIC2.81□□□□□ -1.96
LMO4P61968 AC135507.2-201ENST00000612443 309 ntBASIC2.81□□□□□ -1.96
LMO4P61968 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC2.81□□□□□ -1.96
LMO4P61968 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC2.81□□□□□ -1.96
LMO4P61968 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC2.81□□□□□ -1.96
LMO4P61968 CKAP2P1-201ENST00000555477 2049 ntBASIC2.8□□□□□ -1.96
LMO4P61968 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC2.8□□□□□ -1.96
LMO4P61968 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
LMO4P61968 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
LMO4P61968 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
LMO4P61968 RNU6-1155P-201ENST00000363554 107 ntBASIC2.8□□□□□ -1.96
LMO4P61968 RNY4P16-201ENST00000364768 94 ntBASIC2.8□□□□□ -1.96
LMO4P61968 RNU6-767P-201ENST00000384132 107 ntBASIC2.8□□□□□ -1.96
LMO4P61968 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
LMO4P61968 AL356421.1-201ENST00000403255 413 ntBASIC2.8□□□□□ -1.96
LMO4P61968 AP000567.1-201ENST00000406413 156 ntBASIC2.8□□□□□ -1.96
LMO4P61968 RNA5SP118-201ENST00000410385 109 ntBASIC2.8□□□□□ -1.96
LMO4P61968 RPS20P15-201ENST00000412792 311 ntBASIC2.8□□□□□ -1.96
LMO4P61968 AC007390.1-201ENST00000415722 356 ntBASIC2.8□□□□□ -1.96
LMO4P61968 RAC1P3-201ENST00000416129 580 ntBASIC2.8□□□□□ -1.96
LMO4P61968 MRPL50P2-201ENST00000416821 482 ntBASIC2.8□□□□□ -1.96
LMO4P61968 PDCL2P1-201ENST00000419302 352 ntBASIC2.8□□□□□ -1.96
LMO4P61968 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC2.8□□□□□ -1.96
LMO4P61968 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC2.8□□□□□ -1.96
LMO4P61968 EZH2P1-201ENST00000431167 291 ntBASIC2.8□□□□□ -1.96
LMO4P61968 AL606489.2-201ENST00000433886 234 ntBASIC2.8□□□□□ -1.96
LMO4P61968 AL357552.1-201ENST00000445254 415 ntBASIC2.8□□□□□ -1.96
LMO4P61968 Z75741.1-201ENST00000446793 314 ntBASIC2.8□□□□□ -1.96
LMO4P61968 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC2.8□□□□□ -1.96
LMO4P61968 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC2.8□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms