Protein–RNA interactions for Protein: P59025

RTP1, Receptor-transporting protein 1, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP1P59025 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.7□□□□□ -1.66
RTP1P59025 SNORD51-201ENST00000384320 80 ntBASIC4.7□□□□□ -1.66
RTP1P59025 MT-TG-201ENST00000387429 68 ntBASIC4.7□□□□□ -1.66
RTP1P59025 RNA5SP219-201ENST00000390940 113 ntBASIC4.7□□□□□ -1.66
RTP1P59025 RNU6-516P-201ENST00000411381 104 ntBASIC4.7□□□□□ -1.66
RTP1P59025 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC4.7□□□□□ -1.66
RTP1P59025 RPL7P28-201ENST00000437739 740 ntBASIC4.7□□□□□ -1.66
RTP1P59025 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC4.7□□□□□ -1.66
RTP1P59025 AC239809.1-201ENST00000450470 217 ntBASIC4.7□□□□□ -1.66
RTP1P59025 AL162388.1-201ENST00000450912 352 ntBASIC4.7□□□□□ -1.66
RTP1P59025 HMGB1P30-201ENST00000492455 606 ntBASIC4.7□□□□□ -1.66
RTP1P59025 RBBP4P6-201ENST00000508098 202 ntBASIC4.7□□□□□ -1.66
RTP1P59025 MTCO3P44-201ENST00000510977 541 ntBASIC4.7□□□□□ -1.66
RTP1P59025 SNORA25.10-201ENST00000515926 124 ntBASIC4.7□□□□□ -1.66
RTP1P59025 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC4.7□□□□□ -1.66
RTP1P59025 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC4.7□□□□□ -1.66
RTP1P59025 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC4.7□□□□□ -1.66
RTP1P59025 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC4.7□□□□□ -1.66
RTP1P59025 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC4.7□□□□□ -1.66
RTP1P59025 AC120057.2-201ENST00000571520 271 ntBASIC4.7□□□□□ -1.66
RTP1P59025 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC4.7□□□□□ -1.66
RTP1P59025 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
RTP1P59025 AC015813.4-201ENST00000610469 179 ntBASIC4.7□□□□□ -1.66
RTP1P59025 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
RTP1P59025 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
RTP1P59025 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
RTP1P59025 ZNF33CP-201ENST00000432492 2030 ntBASIC4.7□□□□□ -1.66
RTP1P59025 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.7□□□□□ -1.66
RTP1P59025 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.7□□□□□ -1.66
RTP1P59025 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
RTP1P59025 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
RTP1P59025 PNPT1P2-201ENST00000456768 2050 ntBASIC4.69□□□□□ -1.66
RTP1P59025 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.69□□□□□ -1.66
RTP1P59025 EXOC5P1-201ENST00000510543 1969 ntBASIC4.69□□□□□ -1.66
RTP1P59025 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
RTP1P59025 Y_RNA.463-201ENST00000384271 102 ntBASIC4.69□□□□□ -1.66
RTP1P59025 RNU6-784P-201ENST00000384330 106 ntBASIC4.69□□□□□ -1.66
RTP1P59025 Y_RNA.527-201ENST00000384573 102 ntBASIC4.69□□□□□ -1.66
RTP1P59025 MIR1179-201ENST00000408703 91 ntBASIC4.69□□□□□ -1.66
RTP1P59025 RNU4-6P-201ENST00000410804 122 ntBASIC4.69□□□□□ -1.66
RTP1P59025 RNU6-387P-201ENST00000411331 105 ntBASIC4.69□□□□□ -1.66
RTP1P59025 AC009310.1-201ENST00000414414 451 ntBASIC4.69□□□□□ -1.66
RTP1P59025 BX682237.1-201ENST00000415016 335 ntBASIC4.69□□□□□ -1.66
RTP1P59025 NOTCH2P1-201ENST00000443481 624 ntBASIC4.69□□□□□ -1.66
RTP1P59025 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC4.69□□□□□ -1.66
RTP1P59025 RPL12P25-201ENST00000455592 494 ntBASIC4.69□□□□□ -1.66
RTP1P59025 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC4.69□□□□□ -1.66
RTP1P59025 RNA5SP246-201ENST00000458909 119 ntBASIC4.69□□□□□ -1.66
RTP1P59025 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC4.69□□□□□ -1.66
RTP1P59025 RNU6-685P-201ENST00000517088 95 ntBASIC4.69□□□□□ -1.66
RTP1P59025 DEFB108D-201ENST00000527787 222 ntBASIC4.69□□□□□ -1.66
RTP1P59025 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
RTP1P59025 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC4.69□□□□□ -1.66
RTP1P59025 SETP7-201ENST00000552169 453 ntBASIC4.69□□□□□ -1.66
RTP1P59025 AL121576.1-201ENST00000556055 276 ntBASIC4.69□□□□□ -1.66
RTP1P59025 AC008521.1-201ENST00000587471 187 ntBASIC4.69□□□□□ -1.66
RTP1P59025 AL160281.1-201ENST00000605307 311 ntBASIC4.69□□□□□ -1.66
RTP1P59025 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC4.69□□□□□ -1.66
RTP1P59025 AC010378.1-201ENST00000619270 362 ntBASIC4.69□□□□□ -1.66
RTP1P59025 AL162373.1-201ENST00000620433 407 ntBASIC4.69□□□□□ -1.66
RTP1P59025 AC092608.2-201ENST00000624427 218 ntBASIC4.69□□□□□ -1.66
RTP1P59025 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC4.69□□□□□ -1.66
RTP1P59025 ASNSP1-201ENST00000518311 1939 ntBASIC4.69□□□□□ -1.66
RTP1P59025 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
RTP1P59025 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.69□□□□□ -1.66
RTP1P59025 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.68□□□□□ -1.66
RTP1P59025 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
RTP1P59025 RNU1-15P-201ENST00000353977 144 ntBASIC4.68□□□□□ -1.66
RTP1P59025 RNU6-593P-201ENST00000364716 112 ntBASIC4.68□□□□□ -1.66
RTP1P59025 RNU6-702P-201ENST00000364982 107 ntBASIC4.68□□□□□ -1.66
RTP1P59025 SNORA75B-201ENST00000384053 137 ntBASIC4.68□□□□□ -1.66
RTP1P59025 RNU6-890P-201ENST00000384121 107 ntBASIC4.68□□□□□ -1.66
RTP1P59025 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
RTP1P59025 AL391417.1-201ENST00000404100 426 ntBASIC4.68□□□□□ -1.66
RTP1P59025 Y_RNA.618-201ENST00000410949 107 ntBASIC4.68□□□□□ -1.66
RTP1P59025 RPS15AP40-201ENST00000419621 391 ntBASIC4.68□□□□□ -1.66
RTP1P59025 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
RTP1P59025 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC4.68□□□□□ -1.66
RTP1P59025 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC4.68□□□□□ -1.66
RTP1P59025 SNAP23P1-201ENST00000433229 246 ntBASIC4.68□□□□□ -1.66
RTP1P59025 RPL21P112-201ENST00000434403 463 ntBASIC4.68□□□□□ -1.66
RTP1P59025 RPL12P46-201ENST00000436610 195 ntBASIC4.68□□□□□ -1.66
RTP1P59025 RPL35AP22-201ENST00000436855 335 ntBASIC4.68□□□□□ -1.66
RTP1P59025 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.68□□□□□ -1.66
RTP1P59025 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC4.68□□□□□ -1.66
RTP1P59025 DYNLL1P5-201ENST00000467158 270 ntBASIC4.68□□□□□ -1.66
RTP1P59025 AF213884.1-201ENST00000488102 463 ntBASIC4.68□□□□□ -1.66
RTP1P59025 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC4.68□□□□□ -1.66
RTP1P59025 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC4.68□□□□□ -1.66
RTP1P59025 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC4.68□□□□□ -1.66
RTP1P59025 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC4.68□□□□□ -1.66
RTP1P59025 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC4.68□□□□□ -1.66
RTP1P59025 AL161670.1-201ENST00000554348 137 ntBASIC4.68□□□□□ -1.66
RTP1P59025 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC4.68□□□□□ -1.66
RTP1P59025 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC4.68□□□□□ -1.66
RTP1P59025 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC4.68□□□□□ -1.66
RTP1P59025 PLCE1P1-201ENST00000622094 305 ntBASIC4.68□□□□□ -1.66
RTP1P59025 AL354798.1-201ENST00000622505 329 ntBASIC4.68□□□□□ -1.66
RTP1P59025 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
RTP1P59025 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 95.8 ms