Protein–RNA interactions for Protein: P56524

HDAC4, Histone deacetylase 4, humanhuman

Predictions only

Length 1,084 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4P56524 PIGFP2-201ENST00000421400 651 ntBASIC3.54□□□□□ -1.84
HDAC4P56524 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC3.54□□□□□ -1.84
HDAC4P56524 RPL27AP8-201ENST00000424277 446 ntBASIC3.54□□□□□ -1.84
HDAC4P56524 UBE2D3P2-201ENST00000424409 445 ntBASIC3.54□□□□□ -1.84
HDAC4P56524 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.54□□□□□ -1.84
HDAC4P56524 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC3.54□□□□□ -1.84
HDAC4P56524 SNRPEP4-201ENST00000435815 279 ntBASIC3.54□□□□□ -1.84
HDAC4P56524 ARPC3P1-201ENST00000437218 533 ntBASIC3.54□□□□□ -1.84
HDAC4P56524 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC3.54□□□□□ -1.84
HDAC4P56524 AC093156.1-201ENST00000440382 670 ntBASIC3.54□□□□□ -1.84
HDAC4P56524 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC3.54□□□□□ -1.84
HDAC4P56524 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC3.54□□□□□ -1.84
HDAC4P56524 AC093899.1-201ENST00000457984 376 ntBASIC3.54□□□□□ -1.84
HDAC4P56524 RPS15AP36-201ENST00000492022 382 ntBASIC3.54□□□□□ -1.84
HDAC4P56524 AC107401.1-201ENST00000503426 685 ntBASIC3.54□□□□□ -1.84
HDAC4P56524 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.54□□□□□ -1.84
HDAC4P56524 FAM60DP-201ENST00000524174 632 ntBASIC3.54□□□□□ -1.84
HDAC4P56524 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC3.54□□□□□ -1.84
HDAC4P56524 AC005476.1-201ENST00000554427 397 ntBASIC3.54□□□□□ -1.84
HDAC4P56524 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC3.54□□□□□ -1.84
HDAC4P56524 TPRKBP2-201ENST00000565969 475 ntBASIC3.54□□□□□ -1.84
HDAC4P56524 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC3.54□□□□□ -1.84
HDAC4P56524 AL391840.1-201ENST00000571144 367 ntBASIC3.54□□□□□ -1.84
HDAC4P56524 MIR4474-201ENST00000579189 78 ntBASIC3.54□□□□□ -1.84
HDAC4P56524 MIR4293-201ENST00000584305 78 ntBASIC3.54□□□□□ -1.84
HDAC4P56524 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.54□□□□□ -1.84
HDAC4P56524 AC005000.2-201ENST00000605468 310 ntBASIC3.54□□□□□ -1.84
HDAC4P56524 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC3.54□□□□□ -1.84
HDAC4P56524 AC068831.7-201ENST00000616954 363 ntBASIC3.54□□□□□ -1.84
HDAC4P56524 AC002076.2-201ENST00000617362 122 ntBASIC3.54□□□□□ -1.84
HDAC4P56524 AL136313.1-201ENST00000624804 202 ntBASIC3.54□□□□□ -1.84
HDAC4P56524 AC068137.3-201ENST00000639191 341 ntBASIC3.54□□□□□ -1.84
HDAC4P56524 AC073869.6-201ENST00000640656 341 ntBASIC3.54□□□□□ -1.84
HDAC4P56524 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
HDAC4P56524 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
HDAC4P56524 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.54□□□□□ -1.84
HDAC4P56524 AC090740.1-201ENST00000623193 2262 ntBASIC3.54□□□□□ -1.84
HDAC4P56524 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
HDAC4P56524 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC3.53□□□□□ -1.84
HDAC4P56524 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.53□□□□□ -1.84
HDAC4P56524 OR1S2-201ENST00000302592 978 ntBASIC3.53□□□□□ -1.84
HDAC4P56524 DEFB108F-201ENST00000344638 222 ntBASIC3.53□□□□□ -1.84
HDAC4P56524 SNORA23-201ENST00000365128 182 ntBASIC3.53□□□□□ -1.84
HDAC4P56524 RNU6-169P-201ENST00000365336 107 ntBASIC3.53□□□□□ -1.84
HDAC4P56524 AP002088.1-201ENST00000382740 395 ntBASIC3.53□□□□□ -1.84
HDAC4P56524 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
HDAC4P56524 RNA5SP293-201ENST00000410527 113 ntBASIC3.53□□□□□ -1.84
HDAC4P56524 AC127391.1-201ENST00000411737 98 ntBASIC3.53□□□□□ -1.84
HDAC4P56524 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC3.53□□□□□ -1.84
HDAC4P56524 MTCO2P11-201ENST00000431069 680 ntBASIC3.53□□□□□ -1.84
HDAC4P56524 AL451074.3-201ENST00000437709 472 ntBASIC3.53□□□□□ -1.84
HDAC4P56524 AC005094.1-201ENST00000440420 368 ntBASIC3.53□□□□□ -1.84
HDAC4P56524 CYCSP32-201ENST00000440548 321 ntBASIC3.53□□□□□ -1.84
HDAC4P56524 RPL26P6-201ENST00000440913 438 ntBASIC3.53□□□□□ -1.84
HDAC4P56524 USP9YP15-201ENST00000442391 422 ntBASIC3.53□□□□□ -1.84
HDAC4P56524 MTCO3P45-201ENST00000443036 613 ntBASIC3.53□□□□□ -1.84
HDAC4P56524 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC3.53□□□□□ -1.84
HDAC4P56524 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.53□□□□□ -1.84
HDAC4P56524 MTND1P1-201ENST00000445453 368 ntBASIC3.53□□□□□ -1.84
HDAC4P56524 C1DP4-201ENST00000455429 424 ntBASIC3.53□□□□□ -1.84
HDAC4P56524 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC3.53□□□□□ -1.84
HDAC4P56524 AC008481.1-201ENST00000463278 396 ntBASIC3.53□□□□□ -1.84
HDAC4P56524 MTCO2P29-201ENST00000465212 189 ntBASIC3.53□□□□□ -1.84
HDAC4P56524 RPL23AP67-201ENST00000465341 474 ntBASIC3.53□□□□□ -1.84
HDAC4P56524 RPS3AP17-201ENST00000472594 777 ntBASIC3.53□□□□□ -1.84
HDAC4P56524 RN7SL442P-201ENST00000473804 320 ntBASIC3.53□□□□□ -1.84
HDAC4P56524 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC3.53□□□□□ -1.84
HDAC4P56524 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC3.53□□□□□ -1.84
HDAC4P56524 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC3.53□□□□□ -1.84
HDAC4P56524 SNORA31.22-201ENST00000517204 135 ntBASIC3.53□□□□□ -1.84
HDAC4P56524 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC3.53□□□□□ -1.84
HDAC4P56524 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC3.53□□□□□ -1.84
HDAC4P56524 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC3.53□□□□□ -1.84
HDAC4P56524 AC006557.5-201ENST00000603126 811 ntBASIC3.53□□□□□ -1.84
HDAC4P56524 AL133173.2-201ENST00000614270 90 ntBASIC3.53□□□□□ -1.84
HDAC4P56524 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
HDAC4P56524 AC027514.1-201ENST00000588561 1603 ntBASIC3.52□□□□□ -1.85
HDAC4P56524 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
HDAC4P56524 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
HDAC4P56524 RNU1-75P-201ENST00000347264 129 ntBASIC3.52□□□□□ -1.85
HDAC4P56524 Y_RNA.6-201ENST00000362350 114 ntBASIC3.52□□□□□ -1.85
HDAC4P56524 RNU6-511P-201ENST00000363496 107 ntBASIC3.52□□□□□ -1.85
HDAC4P56524 RNU6-805P-201ENST00000365643 106 ntBASIC3.52□□□□□ -1.85
HDAC4P56524 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
HDAC4P56524 GSTA9P-201ENST00000406231 611 ntBASIC3.52□□□□□ -1.85
HDAC4P56524 FAT1P1-201ENST00000406588 507 ntBASIC3.52□□□□□ -1.85
HDAC4P56524 U3.42-201ENST00000408746 214 ntBASIC3.52□□□□□ -1.85
HDAC4P56524 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.52□□□□□ -1.85
HDAC4P56524 AC126124.2-201ENST00000413542 321 ntBASIC3.52□□□□□ -1.85
HDAC4P56524 RPL21P24-201ENST00000413752 448 ntBASIC3.52□□□□□ -1.85
HDAC4P56524 BX842559.1-201ENST00000419615 532 ntBASIC3.52□□□□□ -1.85
HDAC4P56524 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC3.52□□□□□ -1.85
HDAC4P56524 TRIM60P10Y-201ENST00000425589 751 ntBASIC3.52□□□□□ -1.85
HDAC4P56524 RPL23AP82-202ENST00000427528 469 ntBASIC3.52□□□□□ -1.85
HDAC4P56524 TRIM60P8Y-201ENST00000436338 762 ntBASIC3.52□□□□□ -1.85
HDAC4P56524 AC009969.1-201ENST00000438726 172 ntBASIC3.52□□□□□ -1.85
HDAC4P56524 GAPDHP27-201ENST00000447427 1020 ntBASIC3.52□□□□□ -1.85
HDAC4P56524 AC008264.1-201ENST00000447612 367 ntBASIC3.52□□□□□ -1.85
HDAC4P56524 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC3.52□□□□□ -1.85
HDAC4P56524 AC132479.1-201ENST00000449160 144 ntBASIC3.52□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 80.9 ms