Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.33□□□□□ -1.88
CDH12P55289 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.33□□□□□ -1.88
CDH12P55289 RPL21P133-201ENST00000443666 476 ntBASIC3.33□□□□□ -1.88
CDH12P55289 MTND1P18-201ENST00000448191 573 ntBASIC3.33□□□□□ -1.88
CDH12P55289 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.33□□□□□ -1.88
CDH12P55289 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC3.33□□□□□ -1.88
CDH12P55289 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.33□□□□□ -1.88
CDH12P55289 RNU7-170P-201ENST00000459303 61 ntBASIC3.33□□□□□ -1.88
CDH12P55289 AC092451.1-201ENST00000480211 153 ntBASIC3.33□□□□□ -1.88
CDH12P55289 MTCYBP18-201ENST00000501056 747 ntBASIC3.33□□□□□ -1.88
CDH12P55289 AC018710.1-201ENST00000506509 158 ntBASIC3.33□□□□□ -1.88
CDH12P55289 NAF1-205ENST00000509434 385 ntTSL 3 BASIC3.33□□□□□ -1.88
CDH12P55289 AC005921.1-201ENST00000510589 286 ntBASIC3.33□□□□□ -1.88
CDH12P55289 RNA5SP503-201ENST00000517047 117 ntBASIC3.33□□□□□ -1.88
CDH12P55289 RNU6-1231P-201ENST00000517185 103 ntBASIC3.33□□□□□ -1.88
CDH12P55289 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC3.33□□□□□ -1.88
CDH12P55289 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC3.33□□□□□ -1.88
CDH12P55289 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CDH12P55289 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CDH12P55289 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.33□□□□□ -1.88
CDH12P55289 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.33□□□□□ -1.88
CDH12P55289 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC3.33□□□□□ -1.88
CDH12P55289 MIR4703-201ENST00000577728 79 ntBASIC3.33□□□□□ -1.88
CDH12P55289 MIR5187-201ENST00000583479 76 ntBASIC3.33□□□□□ -1.88
CDH12P55289 AC010525.2-201ENST00000590920 195 ntBASIC3.33□□□□□ -1.88
CDH12P55289 AC006077.1-201ENST00000604746 343 ntBASIC3.33□□□□□ -1.88
CDH12P55289 AC103710.3-201ENST00000608157 948 ntBASIC3.33□□□□□ -1.88
CDH12P55289 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
CDH12P55289 AL391261.4-201ENST00000616012 481 ntBASIC3.33□□□□□ -1.88
CDH12P55289 AC022149.2-201ENST00000621061 203 ntBASIC3.33□□□□□ -1.88
CDH12P55289 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CDH12P55289 AC068647.1-201ENST00000489539 2265 ntBASIC3.33□□□□□ -1.88
CDH12P55289 API5P2-201ENST00000397055 1498 ntBASIC3.33□□□□□ -1.88
CDH12P55289 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CDH12P55289 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.33□□□□□ -1.88
CDH12P55289 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
CDH12P55289 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
CDH12P55289 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
CDH12P55289 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CDH12P55289 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CDH12P55289 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CDH12P55289 AL137003.2-201ENST00000606924 2538 ntBASIC3.32□□□□□ -1.88
CDH12P55289 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CDH12P55289 NACAP2-201ENST00000318548 624 ntBASIC3.32□□□□□ -1.88
CDH12P55289 RNU6-552P-201ENST00000362869 119 ntBASIC3.32□□□□□ -1.88
CDH12P55289 Y_RNA.160-201ENST00000363677 92 ntBASIC3.32□□□□□ -1.88
CDH12P55289 Y_RNA.625-201ENST00000411256 107 ntBASIC3.32□□□□□ -1.88
CDH12P55289 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.32□□□□□ -1.88
CDH12P55289 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.32□□□□□ -1.88
CDH12P55289 RPL17P36-201ENST00000420302 549 ntBASIC3.32□□□□□ -1.88
CDH12P55289 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC3.32□□□□□ -1.88
CDH12P55289 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.32□□□□□ -1.88
CDH12P55289 MTND4P25-201ENST00000441039 533 ntBASIC3.32□□□□□ -1.88
CDH12P55289 NEFMP1-201ENST00000443423 1006 ntBASIC3.32□□□□□ -1.88
CDH12P55289 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC3.32□□□□□ -1.88
CDH12P55289 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC3.32□□□□□ -1.88
CDH12P55289 RPS20P20-201ENST00000460498 340 ntBASIC3.32□□□□□ -1.88
CDH12P55289 AL133162.1-201ENST00000463228 453 ntBASIC3.32□□□□□ -1.88
CDH12P55289 RPL9P32-201ENST00000464118 620 ntBASIC3.32□□□□□ -1.88
CDH12P55289 RN7SL385P-201ENST00000468873 276 ntBASIC3.32□□□□□ -1.88
CDH12P55289 AL049874.1-201ENST00000489560 388 ntBASIC3.32□□□□□ -1.88
CDH12P55289 MTCO2P30-201ENST00000503662 364 ntBASIC3.32□□□□□ -1.88
CDH12P55289 RBBP4P6-201ENST00000508098 202 ntBASIC3.32□□□□□ -1.88
CDH12P55289 AC098799.2-201ENST00000509466 868 ntBASIC3.32□□□□□ -1.88
CDH12P55289 AC098591.2-201ENST00000510152 315 ntBASIC3.32□□□□□ -1.88
CDH12P55289 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC3.32□□□□□ -1.88
CDH12P55289 SNORA31.3-201ENST00000516029 96 ntBASIC3.32□□□□□ -1.88
CDH12P55289 RNU2-27P-201ENST00000516185 142 ntBASIC3.32□□□□□ -1.88
CDH12P55289 SNORD60.2-201ENST00000516883 86 ntBASIC3.32□□□□□ -1.88
CDH12P55289 RN7SKP258-201ENST00000517151 304 ntBASIC3.32□□□□□ -1.88
CDH12P55289 AP006245.1-201ENST00000522549 120 ntBASIC3.32□□□□□ -1.88
CDH12P55289 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC3.32□□□□□ -1.88
CDH12P55289 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.32□□□□□ -1.88
CDH12P55289 HIGD1AP5-201ENST00000529959 259 ntBASIC3.32□□□□□ -1.88
CDH12P55289 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.32□□□□□ -1.88
CDH12P55289 AL355836.1-201ENST00000555951 870 ntBASIC3.32□□□□□ -1.88
CDH12P55289 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC3.32□□□□□ -1.88
CDH12P55289 AC136624.4-201ENST00000573044 370 ntBASIC3.32□□□□□ -1.88
CDH12P55289 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC3.32□□□□□ -1.88
CDH12P55289 AC008521.1-201ENST00000587471 187 ntBASIC3.32□□□□□ -1.88
CDH12P55289 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC3.32□□□□□ -1.88
CDH12P55289 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC3.32□□□□□ -1.88
CDH12P55289 AC006504.8-201ENST00000621046 635 ntBASIC3.32□□□□□ -1.88
CDH12P55289 AC007998.5-201ENST00000622938 237 ntBASIC3.32□□□□□ -1.88
CDH12P55289 AC009033.1-201ENST00000624279 431 ntBASIC3.32□□□□□ -1.88
CDH12P55289 AC112200.1-201ENST00000625015 234 ntBASIC3.32□□□□□ -1.88
CDH12P55289 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC3.32□□□□□ -1.88
CDH12P55289 U6.114-201ENST00000636407 96 ntBASIC3.32□□□□□ -1.88
CDH12P55289 ASNSP3-201ENST00000451989 1306 ntBASIC3.32□□□□□ -1.88
CDH12P55289 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CDH12P55289 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.32□□□□□ -1.88
CDH12P55289 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.32□□□□□ -1.88
CDH12P55289 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CDH12P55289 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
CDH12P55289 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CDH12P55289 OR4G2P-202ENST00000641004 1759 ntBASIC3.31□□□□□ -1.88
CDH12P55289 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.31□□□□□ -1.88
CDH12P55289 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CDH12P55289 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CDH12P55289 DEFB108F-201ENST00000344638 222 ntBASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 94.4 ms