Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.49□□□□□ -1.85
NR1H2P55055 AC125238.1-201ENST00000448842 249 ntBASIC3.49□□□□□ -1.85
NR1H2P55055 SNRPGP6-201ENST00000451124 220 ntBASIC3.49□□□□□ -1.85
NR1H2P55055 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC3.49□□□□□ -1.85
NR1H2P55055 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC3.49□□□□□ -1.85
NR1H2P55055 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC3.49□□□□□ -1.85
NR1H2P55055 AC010493.1-201ENST00000513479 292 ntBASIC3.49□□□□□ -1.85
NR1H2P55055 RNU6-445P-201ENST00000516949 107 ntBASIC3.49□□□□□ -1.85
NR1H2P55055 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.49□□□□□ -1.85
NR1H2P55055 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC3.49□□□□□ -1.85
NR1H2P55055 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC3.49□□□□□ -1.85
NR1H2P55055 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC3.49□□□□□ -1.85
NR1H2P55055 GLUD1P4-201ENST00000590914 418 ntBASIC3.49□□□□□ -1.85
NR1H2P55055 AL022154.1-201ENST00000604698 785 ntBASIC3.49□□□□□ -1.85
NR1H2P55055 AP002360.4-201ENST00000606980 481 ntBASIC3.49□□□□□ -1.85
NR1H2P55055 MIR6868-201ENST00000611215 58 ntBASIC3.49□□□□□ -1.85
NR1H2P55055 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.49□□□□□ -1.85
NR1H2P55055 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
NR1H2P55055 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.49□□□□□ -1.85
NR1H2P55055 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.49□□□□□ -1.85
NR1H2P55055 AC010680.1-201ENST00000590024 3590 ntBASIC3.48□□□□□ -1.85
NR1H2P55055 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.48□□□□□ -1.85
NR1H2P55055 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
NR1H2P55055 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
NR1H2P55055 SNORA63.1-201ENST00000362493 131 ntBASIC3.48□□□□□ -1.85
NR1H2P55055 RNU6-648P-201ENST00000410190 107 ntBASIC3.48□□□□□ -1.85
NR1H2P55055 RNA5SP31-201ENST00000411144 127 ntBASIC3.48□□□□□ -1.85
NR1H2P55055 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC3.48□□□□□ -1.85
NR1H2P55055 BTF3L4P3-201ENST00000418879 476 ntBASIC3.48□□□□□ -1.85
NR1H2P55055 RPS3AP44-201ENST00000425466 790 ntBASIC3.48□□□□□ -1.85
NR1H2P55055 MTCO2P11-201ENST00000431069 680 ntBASIC3.48□□□□□ -1.85
NR1H2P55055 TBCAP1-201ENST00000436520 327 ntBASIC3.48□□□□□ -1.85
NR1H2P55055 MTATP6P30-201ENST00000443540 664 ntBASIC3.48□□□□□ -1.85
NR1H2P55055 PRDX3P3-201ENST00000447765 522 ntBASIC3.48□□□□□ -1.85
NR1H2P55055 AC132479.1-201ENST00000449160 144 ntBASIC3.48□□□□□ -1.85
NR1H2P55055 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.48□□□□□ -1.85
NR1H2P55055 AC010099.1-201ENST00000455434 375 ntBASIC3.48□□□□□ -1.85
NR1H2P55055 RPS4XP2-201ENST00000458402 793 ntBASIC3.48□□□□□ -1.85
NR1H2P55055 RPL21P11-201ENST00000461458 483 ntBASIC3.48□□□□□ -1.85
NR1H2P55055 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.48□□□□□ -1.85
NR1H2P55055 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC3.48□□□□□ -1.85
NR1H2P55055 RNU6-506P-201ENST00000516553 94 ntBASIC3.48□□□□□ -1.85
NR1H2P55055 RNU6-143P-201ENST00000516942 93 ntBASIC3.48□□□□□ -1.85
NR1H2P55055 RANP9-201ENST00000519957 271 ntBASIC3.48□□□□□ -1.85
NR1H2P55055 FAM92A1P1-201ENST00000528023 890 ntBASIC3.48□□□□□ -1.85
NR1H2P55055 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
NR1H2P55055 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.48□□□□□ -1.85
NR1H2P55055 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC3.48□□□□□ -1.85
NR1H2P55055 NCAPGP2-201ENST00000557911 754 ntBASIC3.48□□□□□ -1.85
NR1H2P55055 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.48□□□□□ -1.85
NR1H2P55055 AC006504.3-201ENST00000586818 523 ntBASIC3.48□□□□□ -1.85
NR1H2P55055 DPPA3P3-201ENST00000603842 430 ntBASIC3.48□□□□□ -1.85
NR1H2P55055 AC136601.2-201ENST00000604356 474 ntBASIC3.48□□□□□ -1.85
NR1H2P55055 AL161756.2-201ENST00000604597 246 ntBASIC3.48□□□□□ -1.85
NR1H2P55055 AL365204.3-201ENST00000612448 685 ntBASIC3.48□□□□□ -1.85
NR1H2P55055 AL161629.2-201ENST00000615347 275 ntBASIC3.48□□□□□ -1.85
NR1H2P55055 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.48□□□□□ -1.85
NR1H2P55055 AL589994.2-201ENST00000621124 579 ntBASIC3.48□□□□□ -1.85
NR1H2P55055 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
NR1H2P55055 AC068137.3-201ENST00000639191 341 ntBASIC3.48□□□□□ -1.85
NR1H2P55055 AC073869.6-201ENST00000640656 341 ntBASIC3.48□□□□□ -1.85
NR1H2P55055 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
NR1H2P55055 MAPK10-362ENST00000641864 4484 ntBASIC3.48□□□□□ -1.85
NR1H2P55055 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
NR1H2P55055 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC3.48□□□□□ -1.85
NR1H2P55055 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
NR1H2P55055 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.47□□□□□ -1.85
NR1H2P55055 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
NR1H2P55055 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
NR1H2P55055 Y_RNA.6-201ENST00000362350 114 ntBASIC3.47□□□□□ -1.85
NR1H2P55055 RNU6-213P-201ENST00000384051 104 ntBASIC3.47□□□□□ -1.85
NR1H2P55055 RNU6-517P-201ENST00000384362 110 ntBASIC3.47□□□□□ -1.85
NR1H2P55055 RAB9AP3-201ENST00000412737 573 ntBASIC3.47□□□□□ -1.85
NR1H2P55055 AC068533.1-201ENST00000418542 415 ntBASIC3.47□□□□□ -1.85
NR1H2P55055 ELOCP14-201ENST00000428070 331 ntBASIC3.47□□□□□ -1.85
NR1H2P55055 MED13P1-201ENST00000428342 171 ntBASIC3.47□□□□□ -1.85
NR1H2P55055 RPL21P40-201ENST00000428586 483 ntBASIC3.47□□□□□ -1.85
NR1H2P55055 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC3.47□□□□□ -1.85
NR1H2P55055 RPL23AP22-201ENST00000437556 453 ntBASIC3.47□□□□□ -1.85
NR1H2P55055 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC3.47□□□□□ -1.85
NR1H2P55055 ELOCP7-201ENST00000439968 331 ntBASIC3.47□□□□□ -1.85
NR1H2P55055 RAB9AP1-201ENST00000449393 573 ntBASIC3.47□□□□□ -1.85
NR1H2P55055 RPL21P8-201ENST00000465083 535 ntBASIC3.47□□□□□ -1.85
NR1H2P55055 AC007182.2-201ENST00000489251 402 ntBASIC3.47□□□□□ -1.85
NR1H2P55055 RNU6-677P-201ENST00000516914 101 ntBASIC3.47□□□□□ -1.85
NR1H2P55055 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC3.47□□□□□ -1.85
NR1H2P55055 DNAJC8P1-201ENST00000554535 372 ntBASIC3.47□□□□□ -1.85
NR1H2P55055 AC067852.3-201ENST00000589177 561 ntBASIC3.47□□□□□ -1.85
NR1H2P55055 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.47□□□□□ -1.85
NR1H2P55055 AC007684.1-201ENST00000609671 477 ntBASIC3.47□□□□□ -1.85
NR1H2P55055 FTX_3.1-201ENST00000610451 147 ntBASIC3.47□□□□□ -1.85
NR1H2P55055 AC012314.7-201ENST00000619693 93 ntBASIC3.47□□□□□ -1.85
NR1H2P55055 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.47□□□□□ -1.85
NR1H2P55055 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.47□□□□□ -1.85
NR1H2P55055 MIR6863-201ENST00000636112 90 ntBASIC3.47□□□□□ -1.85
NR1H2P55055 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
NR1H2P55055 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.46□□□□□ -1.85
NR1H2P55055 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.46□□□□□ -1.85
NR1H2P55055 CR848007.1-201ENST00000442354 1699 ntBASIC3.46□□□□□ -1.85
NR1H2P55055 RNU6-525P-201ENST00000363685 104 ntBASIC3.46□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms