Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 RNU6-39P-201ENST00000384344 107 ntBASIC3.08□□□□□ -1.92
PDX1P52945 RNU6-278P-201ENST00000390945 109 ntBASIC3.08□□□□□ -1.92
PDX1P52945 AL031121.1-201ENST00000406553 254 ntBASIC3.08□□□□□ -1.92
PDX1P52945 RNU2-66P-201ENST00000410650 161 ntBASIC3.08□□□□□ -1.92
PDX1P52945 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
PDX1P52945 MTND3P17-201ENST00000416968 344 ntBASIC3.08□□□□□ -1.92
PDX1P52945 BX295541.1-201ENST00000417774 250 ntBASIC3.08□□□□□ -1.92
PDX1P52945 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.08□□□□□ -1.92
PDX1P52945 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC3.08□□□□□ -1.92
PDX1P52945 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC3.08□□□□□ -1.92
PDX1P52945 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC3.08□□□□□ -1.92
PDX1P52945 AL358934.1-201ENST00000432346 324 ntBASIC3.08□□□□□ -1.92
PDX1P52945 AC073614.1-201ENST00000438690 650 ntBASIC3.08□□□□□ -1.92
PDX1P52945 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC3.08□□□□□ -1.92
PDX1P52945 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC3.08□□□□□ -1.92
PDX1P52945 USP9YP15-201ENST00000442391 422 ntBASIC3.08□□□□□ -1.92
PDX1P52945 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC3.08□□□□□ -1.92
PDX1P52945 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC3.08□□□□□ -1.92
PDX1P52945 RBM43P1-201ENST00000476891 1081 ntBASIC3.08□□□□□ -1.92
PDX1P52945 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC3.08□□□□□ -1.92
PDX1P52945 MTND2P33-201ENST00000506452 1031 ntBASIC3.08□□□□□ -1.92
PDX1P52945 TTC39CP1-201ENST00000512513 755 ntBASIC3.08□□□□□ -1.92
PDX1P52945 RNU6-390P-201ENST00000516259 103 ntBASIC3.08□□□□□ -1.92
PDX1P52945 RNU6-1256P-201ENST00000516539 103 ntBASIC3.08□□□□□ -1.92
PDX1P52945 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC3.08□□□□□ -1.92
PDX1P52945 AC100870.1-201ENST00000522035 505 ntBASIC3.08□□□□□ -1.92
PDX1P52945 PSMA2P1-201ENST00000526365 646 ntBASIC3.08□□□□□ -1.92
PDX1P52945 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC3.08□□□□□ -1.92
PDX1P52945 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.08□□□□□ -1.92
PDX1P52945 AC022080.3-201ENST00000544433 482 ntBASIC3.08□□□□□ -1.92
PDX1P52945 AC009063.1-201ENST00000563342 702 ntBASIC3.08□□□□□ -1.92
PDX1P52945 AC055876.1-202ENST00000567053 138 ntBASIC3.08□□□□□ -1.92
PDX1P52945 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.08□□□□□ -1.92
PDX1P52945 MIR3921-201ENST00000577308 85 ntBASIC3.08□□□□□ -1.92
PDX1P52945 UBL5P2-201ENST00000583788 219 ntBASIC3.08□□□□□ -1.92
PDX1P52945 AC006504.3-201ENST00000586818 523 ntBASIC3.08□□□□□ -1.92
PDX1P52945 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC3.08□□□□□ -1.92
PDX1P52945 DPPA3P3-201ENST00000603842 430 ntBASIC3.08□□□□□ -1.92
PDX1P52945 AC008277.2-201ENST00000605196 797 ntBASIC3.08□□□□□ -1.92
PDX1P52945 AL139286.2-201ENST00000606838 396 ntBASIC3.08□□□□□ -1.92
PDX1P52945 AC090425.2-201ENST00000608818 501 ntBASIC3.08□□□□□ -1.92
PDX1P52945 AP002826.1-201ENST00000608835 315 ntBASIC3.08□□□□□ -1.92
PDX1P52945 AC109347.2-201ENST00000610220 349 ntBASIC3.08□□□□□ -1.92
PDX1P52945 SDR42E1P2-201ENST00000614861 481 ntBASIC3.08□□□□□ -1.92
PDX1P52945 SNHG22-203ENST00000617833 660 ntBASIC3.08□□□□□ -1.92
PDX1P52945 SNORD39.4-201ENST00000620099 78 ntBASIC3.08□□□□□ -1.92
PDX1P52945 MIR4275-201ENST00000636486 87 ntBASIC3.08□□□□□ -1.92
PDX1P52945 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
PDX1P52945 AL079305.1-201ENST00000623159 3008 ntBASIC3.08□□□□□ -1.92
PDX1P52945 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
PDX1P52945 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.07□□□□□ -1.92
PDX1P52945 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.07□□□□□ -1.92
PDX1P52945 AC127391.1-201ENST00000411737 98 ntBASIC3.07□□□□□ -1.92
PDX1P52945 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC3.07□□□□□ -1.92
PDX1P52945 ELOCP4-201ENST00000420090 333 ntBASIC3.07□□□□□ -1.92
PDX1P52945 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC3.07□□□□□ -1.92
PDX1P52945 RPL35AP12-201ENST00000425362 338 ntBASIC3.07□□□□□ -1.92
PDX1P52945 AC093106.2-201ENST00000428212 385 ntBASIC3.07□□□□□ -1.92
PDX1P52945 FCF1P1-201ENST00000432690 571 ntBASIC3.07□□□□□ -1.92
PDX1P52945 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC3.07□□□□□ -1.92
PDX1P52945 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC3.07□□□□□ -1.92
PDX1P52945 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC3.07□□□□□ -1.92
PDX1P52945 AL359385.1-201ENST00000456509 365 ntBASIC3.07□□□□□ -1.92
PDX1P52945 MTCO2P29-201ENST00000465212 189 ntBASIC3.07□□□□□ -1.92
PDX1P52945 AL049714.1-201ENST00000466686 347 ntBASIC3.07□□□□□ -1.92
PDX1P52945 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC3.07□□□□□ -1.92
PDX1P52945 RN7SL442P-201ENST00000473804 320 ntBASIC3.07□□□□□ -1.92
PDX1P52945 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.07□□□□□ -1.92
PDX1P52945 NRON-201ENST00000517270 370 ntBASIC3.07□□□□□ -1.92
PDX1P52945 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC3.07□□□□□ -1.92
PDX1P52945 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
PDX1P52945 AL355836.1-201ENST00000555951 870 ntBASIC3.07□□□□□ -1.92
PDX1P52945 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC3.07□□□□□ -1.92
PDX1P52945 MIR3167-201ENST00000579623 85 ntBASIC3.07□□□□□ -1.92
PDX1P52945 MIR3682-201ENST00000581338 84 ntBASIC3.07□□□□□ -1.92
PDX1P52945 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC3.07□□□□□ -1.92
PDX1P52945 AC078795.2-201ENST00000602835 1252 ntBASIC3.07□□□□□ -1.92
PDX1P52945 AC091805.2-201ENST00000603848 235 ntBASIC3.07□□□□□ -1.92
PDX1P52945 AC013553.2-201ENST00000604244 589 ntBASIC3.07□□□□□ -1.92
PDX1P52945 AL136363.1-201ENST00000605349 337 ntBASIC3.07□□□□□ -1.92
PDX1P52945 AC103710.1-201ENST00000610003 901 ntBASIC3.07□□□□□ -1.92
PDX1P52945 AC104073.3-201ENST00000610942 955 ntBASIC3.07□□□□□ -1.92
PDX1P52945 uc_338.1-201ENST00000612113 180 ntBASIC3.07□□□□□ -1.92
PDX1P52945 Z99129.1-201ENST00000612510 255 ntBASIC3.07□□□□□ -1.92
PDX1P52945 AL133173.2-201ENST00000614270 90 ntBASIC3.07□□□□□ -1.92
PDX1P52945 AC091834.1-201ENST00000614543 472 ntBASIC3.07□□□□□ -1.92
PDX1P52945 XIST_intron.1-201ENST00000619444 68 ntBASIC3.07□□□□□ -1.92
PDX1P52945 AC099842.1-201ENST00000619919 596 ntBASIC3.07□□□□□ -1.92
PDX1P52945 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC3.07□□□□□ -1.92
PDX1P52945 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
PDX1P52945 ANKRD26P2-201ENST00000445530 1710 ntBASIC3.07□□□□□ -1.92
PDX1P52945 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.07□□□□□ -1.92
PDX1P52945 SDAD1P2-201ENST00000441308 2028 ntBASIC3.07□□□□□ -1.92
PDX1P52945 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
PDX1P52945 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
PDX1P52945 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
PDX1P52945 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.06□□□□□ -1.92
PDX1P52945 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
PDX1P52945 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
PDX1P52945 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC3.06□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 265.9 ms