Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC5□□□□□ -1.61
USP11P51784 RPL9P32-201ENST00000464118 620 ntBASIC5□□□□□ -1.61
USP11P51784 RN7SL385P-201ENST00000468873 276 ntBASIC5□□□□□ -1.61
USP11P51784 RN7SL432P-201ENST00000484057 298 ntBASIC5□□□□□ -1.61
USP11P51784 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC5□□□□□ -1.61
USP11P51784 IGLVIV-65-201ENST00000517313 360 ntBASIC5□□□□□ -1.61
USP11P51784 AC100870.1-201ENST00000522035 505 ntBASIC5□□□□□ -1.61
USP11P51784 AC025423.5-201ENST00000550230 219 ntBASIC5□□□□□ -1.61
USP11P51784 MIR4277-201ENST00000578298 84 ntBASIC5□□□□□ -1.61
USP11P51784 MIR5188-201ENST00000583467 113 ntBASIC5□□□□□ -1.61
USP11P51784 AC005899.2-201ENST00000584353 90 ntBASIC5□□□□□ -1.61
USP11P51784 AC113403.1-201ENST00000604910 193 ntBASIC5□□□□□ -1.61
USP11P51784 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC5□□□□□ -1.61
USP11P51784 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC5□□□□□ -1.61
USP11P51784 SUPT16HP1-201ENST00000537175 3133 ntBASIC5□□□□□ -1.61
USP11P51784 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
USP11P51784 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC5□□□□□ -1.61
USP11P51784 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC5□□□□□ -1.61
USP11P51784 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
USP11P51784 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC5□□□□□ -1.61
USP11P51784 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC5□□□□□ -1.61
USP11P51784 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
USP11P51784 AC011978.2-201ENST00000569835 2054 ntBASIC5□□□□□ -1.61
USP11P51784 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
USP11P51784 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC5□□□□□ -1.61
USP11P51784 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
USP11P51784 AC018529.3-201ENST00000624212 2254 ntBASIC4.99□□□□□ -1.61
USP11P51784 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
USP11P51784 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
USP11P51784 EIF2AP4-201ENST00000424793 1781 ntBASIC4.99□□□□□ -1.61
USP11P51784 MIR331-201ENST00000362302 94 ntBASIC4.99□□□□□ -1.61
USP11P51784 RNU1-94P-201ENST00000362627 173 ntBASIC4.99□□□□□ -1.61
USP11P51784 RNU1-44P-201ENST00000384453 163 ntBASIC4.99□□□□□ -1.61
USP11P51784 RNU6-33P-201ENST00000384793 107 ntBASIC4.99□□□□□ -1.61
USP11P51784 AC009237.10-201ENST00000414112 510 ntBASIC4.99□□□□□ -1.61
USP11P51784 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
USP11P51784 AC097713.2-201ENST00000430199 356 ntBASIC4.99□□□□□ -1.61
USP11P51784 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.99□□□□□ -1.61
USP11P51784 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC4.99□□□□□ -1.61
USP11P51784 PHBP16-201ENST00000446318 950 ntBASIC4.99□□□□□ -1.61
USP11P51784 MTND4LP30-201ENST00000454092 297 ntBASIC4.99□□□□□ -1.61
USP11P51784 RNU7-187P-201ENST00000458985 68 ntBASIC4.99□□□□□ -1.61
USP11P51784 RPL7AP28-201ENST00000464513 571 ntBASIC4.99□□□□□ -1.61
USP11P51784 AC011276.1-201ENST00000469688 323 ntBASIC4.99□□□□□ -1.61
USP11P51784 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.99□□□□□ -1.61
USP11P51784 FO393415.2-201ENST00000480085 343 ntBASIC4.99□□□□□ -1.61
USP11P51784 AC108860.1-201ENST00000484521 383 ntBASIC4.99□□□□□ -1.61
USP11P51784 RNU6-789P-201ENST00000517105 102 ntBASIC4.99□□□□□ -1.61
USP11P51784 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC4.99□□□□□ -1.61
USP11P51784 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC4.99□□□□□ -1.61
USP11P51784 CYCSP27-201ENST00000527643 293 ntBASIC4.99□□□□□ -1.61
USP11P51784 OR5D17P-201ENST00000531492 978 ntBASIC4.99□□□□□ -1.61
USP11P51784 SETP7-201ENST00000552169 453 ntBASIC4.99□□□□□ -1.61
USP11P51784 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC4.99□□□□□ -1.61
USP11P51784 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4.99□□□□□ -1.61
USP11P51784 AC096772.1-201ENST00000609146 564 ntBASIC4.99□□□□□ -1.61
USP11P51784 AC103858.2-201ENST00000621471 543 ntBASIC4.99□□□□□ -1.61
USP11P51784 AC007546.2-201ENST00000623996 360 ntBASIC4.99□□□□□ -1.61
USP11P51784 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
USP11P51784 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.99□□□□□ -1.61
USP11P51784 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.99□□□□□ -1.61
USP11P51784 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
USP11P51784 ASNSP1-201ENST00000518311 1939 ntBASIC4.99□□□□□ -1.61
USP11P51784 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
USP11P51784 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
USP11P51784 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
USP11P51784 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.98□□□□□ -1.61
USP11P51784 AC092435.4-201ENST00000623012 4159 ntBASIC4.98□□□□□ -1.61
USP11P51784 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.98□□□□□ -1.61
USP11P51784 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.98□□□□□ -1.61
USP11P51784 AL133243.3-201ENST00000617415 3004 ntBASIC4.98□□□□□ -1.61
USP11P51784 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
USP11P51784 Y_RNA.64-201ENST00000362845 102 ntBASIC4.98□□□□□ -1.61
USP11P51784 RNA5SP509-201ENST00000364577 119 ntBASIC4.98□□□□□ -1.61
USP11P51784 SNORA20.1-201ENST00000364790 130 ntBASIC4.98□□□□□ -1.61
USP11P51784 Y_RNA.314-201ENST00000365114 102 ntBASIC4.98□□□□□ -1.61
USP11P51784 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC4.98□□□□□ -1.61
USP11P51784 Y_RNA.515-201ENST00000384535 112 ntBASIC4.98□□□□□ -1.61
USP11P51784 RNU11-4P-201ENST00000391149 133 ntBASIC4.98□□□□□ -1.61
USP11P51784 AL139039.1-201ENST00000401900 692 ntBASIC4.98□□□□□ -1.61
USP11P51784 RPS4XP7-201ENST00000406274 780 ntBASIC4.98□□□□□ -1.61
USP11P51784 RPS20P14-201ENST00000412545 360 ntBASIC4.98□□□□□ -1.61
USP11P51784 RPL21P24-201ENST00000413752 448 ntBASIC4.98□□□□□ -1.61
USP11P51784 UBE2FP1-201ENST00000416536 447 ntBASIC4.98□□□□□ -1.61
USP11P51784 RBMY1KP-201ENST00000423480 476 ntBASIC4.98□□□□□ -1.61
USP11P51784 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.98□□□□□ -1.61
USP11P51784 RPS20P1-201ENST00000434853 354 ntBASIC4.98□□□□□ -1.61
USP11P51784 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC4.98□□□□□ -1.61
USP11P51784 AC007967.1-201ENST00000455422 1159 ntBASIC4.98□□□□□ -1.61
USP11P51784 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC4.98□□□□□ -1.61
USP11P51784 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC4.98□□□□□ -1.61
USP11P51784 MTCO3P44-201ENST00000510977 541 ntBASIC4.98□□□□□ -1.61
USP11P51784 RNU6-138P-201ENST00000515952 107 ntBASIC4.98□□□□□ -1.61
USP11P51784 RNU6-307P-201ENST00000516743 106 ntBASIC4.98□□□□□ -1.61
USP11P51784 IL7-206ENST00000520269 456 ntTSL 3 BASIC4.98□□□□□ -1.61
USP11P51784 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC4.98□□□□□ -1.61
USP11P51784 AC040926.1-201ENST00000530195 238 ntBASIC4.98□□□□□ -1.61
USP11P51784 STX3-204ENST00000530221 534 ntTSL 5 BASIC4.98□□□□□ -1.61
USP11P51784 ASB8-204ENST00000536071 568 ntTSL 4 BASIC4.98□□□□□ -1.61
USP11P51784 RRN3P3-201ENST00000549207 578 ntBASIC4.98□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 124.1 ms