Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 USP9YP35-201ENST00000435696 412 ntBASIC2.2□□□□□ -2.06
CXCL12P48061 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC2.2□□□□□ -2.06
CXCL12P48061 FGF7P5-201ENST00000441829 291 ntBASIC2.2□□□□□ -2.06
CXCL12P48061 AL121871.1-201ENST00000443413 436 ntBASIC2.2□□□□□ -2.06
CXCL12P48061 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC2.2□□□□□ -2.06
CXCL12P48061 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC2.2□□□□□ -2.06
CXCL12P48061 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC2.2□□□□□ -2.06
CXCL12P48061 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC2.2□□□□□ -2.06
CXCL12P48061 snoU13.8-201ENST00000458890 104 ntBASIC2.2□□□□□ -2.06
CXCL12P48061 AC008571.1-201ENST00000467232 300 ntBASIC2.2□□□□□ -2.06
CXCL12P48061 FAM172BP-201ENST00000487497 1089 ntBASIC2.2□□□□□ -2.06
CXCL12P48061 HMGB1P36-201ENST00000487709 576 ntBASIC2.2□□□□□ -2.06
CXCL12P48061 AC106872.3-201ENST00000495104 446 ntBASIC2.2□□□□□ -2.06
CXCL12P48061 AC010587.2-201ENST00000511727 448 ntBASIC2.2□□□□□ -2.06
CXCL12P48061 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC2.2□□□□□ -2.06
CXCL12P48061 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC2.2□□□□□ -2.06
CXCL12P48061 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.2□□□□□ -2.06
CXCL12P48061 RPPH1-2P-201ENST00000516688 293 ntBASIC2.2□□□□□ -2.06
CXCL12P48061 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC2.2□□□□□ -2.06
CXCL12P48061 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC2.2□□□□□ -2.06
CXCL12P48061 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC2.2□□□□□ -2.06
CXCL12P48061 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC2.2□□□□□ -2.06
CXCL12P48061 AC022662.1-201ENST00000580252 331 ntBASIC2.2□□□□□ -2.06
CXCL12P48061 AC245884.10-201ENST00000597355 337 ntBASIC2.2□□□□□ -2.06
CXCL12P48061 AP001429.1-201ENST00000602568 530 ntBASIC2.2□□□□□ -2.06
CXCL12P48061 AP002826.1-201ENST00000608835 315 ntBASIC2.2□□□□□ -2.06
CXCL12P48061 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC2.2□□□□□ -2.06
CXCL12P48061 AC002550.2-201ENST00000621246 394 ntBASIC2.2□□□□□ -2.06
CXCL12P48061 AC011330.2-201ENST00000621680 635 ntBASIC2.2□□□□□ -2.06
CXCL12P48061 AL078595.3-201ENST00000623815 1166 ntBASIC2.2□□□□□ -2.06
CXCL12P48061 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC2.2□□□□□ -2.06
CXCL12P48061 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC2.2□□□□□ -2.06
CXCL12P48061 AP000776.1-201ENST00000530032 1663 ntBASIC2.2□□□□□ -2.06
CXCL12P48061 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.2□□□□□ -2.06
CXCL12P48061 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.2□□□□□ -2.06
CXCL12P48061 AC012321.1-201ENST00000561622 1588 ntBASIC2.19□□□□□ -2.06
CXCL12P48061 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.19□□□□□ -2.06
CXCL12P48061 AC090740.1-201ENST00000623193 2262 ntBASIC2.19□□□□□ -2.06
CXCL12P48061 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
CXCL12P48061 MIR21-201ENST00000362134 72 ntBASIC2.19□□□□□ -2.06
CXCL12P48061 RNU6-289P-201ENST00000364093 107 ntBASIC2.19□□□□□ -2.06
CXCL12P48061 RNU6-777P-201ENST00000364265 104 ntBASIC2.19□□□□□ -2.06
CXCL12P48061 MTCYBP38-201ENST00000417160 1123 ntBASIC2.19□□□□□ -2.06
CXCL12P48061 AL445646.1-201ENST00000431784 216 ntBASIC2.19□□□□□ -2.06
CXCL12P48061 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC2.19□□□□□ -2.06
CXCL12P48061 AC090774.1-201ENST00000435925 246 ntBASIC2.19□□□□□ -2.06
CXCL12P48061 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC2.19□□□□□ -2.06
CXCL12P48061 AL592447.1-201ENST00000447592 540 ntBASIC2.19□□□□□ -2.06
CXCL12P48061 AC234775.1-201ENST00000454247 670 ntBASIC2.19□□□□□ -2.06
CXCL12P48061 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC2.19□□□□□ -2.06
CXCL12P48061 MEMO1P3-201ENST00000459811 302 ntBASIC2.19□□□□□ -2.06
CXCL12P48061 AP000852.1-201ENST00000472460 573 ntBASIC2.19□□□□□ -2.06
CXCL12P48061 GTF2IP9-201ENST00000502460 301 ntBASIC2.19□□□□□ -2.06
CXCL12P48061 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC2.19□□□□□ -2.06
CXCL12P48061 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC2.19□□□□□ -2.06
CXCL12P48061 AC022483.1-201ENST00000514020 567 ntBASIC2.19□□□□□ -2.06
CXCL12P48061 SCARNA16.3-201ENST00000516595 184 ntBASIC2.19□□□□□ -2.06
CXCL12P48061 SNORA31.22-201ENST00000517204 135 ntBASIC2.19□□□□□ -2.06
CXCL12P48061 AC026241.1-201ENST00000517873 2142 ntBASIC2.19□□□□□ -2.06
CXCL12P48061 HMGB1P41-201ENST00000520234 440 ntBASIC2.19□□□□□ -2.06
CXCL12P48061 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC2.19□□□□□ -2.06
CXCL12P48061 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC2.19□□□□□ -2.06
CXCL12P48061 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC2.19□□□□□ -2.06
CXCL12P48061 AC009712.1-201ENST00000564938 316 ntBASIC2.19□□□□□ -2.06
CXCL12P48061 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC2.19□□□□□ -2.06
CXCL12P48061 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC2.19□□□□□ -2.06
CXCL12P48061 AC105224.1-201ENST00000587055 421 ntBASIC2.19□□□□□ -2.06
CXCL12P48061 AC023043.3-201ENST00000593113 385 ntBASIC2.19□□□□□ -2.06
CXCL12P48061 AC004987.4-201ENST00000603383 338 ntBASIC2.19□□□□□ -2.06
CXCL12P48061 AC011451.2-201ENST00000604303 598 ntBASIC2.19□□□□□ -2.06
CXCL12P48061 AP000254.1-201ENST00000609934 520 ntBASIC2.19□□□□□ -2.06
CXCL12P48061 AC010378.1-201ENST00000619270 362 ntBASIC2.19□□□□□ -2.06
CXCL12P48061 AC013470.4-201ENST00000619978 986 ntBASIC2.19□□□□□ -2.06
CXCL12P48061 AC008443.7-201ENST00000622195 246 ntBASIC2.19□□□□□ -2.06
CXCL12P48061 AC090772.4-201ENST00000623599 362 ntBASIC2.19□□□□□ -2.06
CXCL12P48061 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
CXCL12P48061 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.18□□□□□ -2.06
CXCL12P48061 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC2.18□□□□□ -2.06
CXCL12P48061 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.18□□□□□ -2.06
CXCL12P48061 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
CXCL12P48061 DEFB108F-201ENST00000344638 222 ntBASIC2.18□□□□□ -2.06
CXCL12P48061 RN7SKP226-201ENST00000364912 300 ntBASIC2.18□□□□□ -2.06
CXCL12P48061 RNU6-1207P-201ENST00000384343 107 ntBASIC2.18□□□□□ -2.06
CXCL12P48061 RPS4XP3-201ENST00000398541 413 ntBASIC2.18□□□□□ -2.06
CXCL12P48061 SSR1P2-201ENST00000415208 787 ntBASIC2.18□□□□□ -2.06
CXCL12P48061 CCDC58P2-201ENST00000417131 366 ntBASIC2.18□□□□□ -2.06
CXCL12P48061 ELOCP9-201ENST00000418624 239 ntBASIC2.18□□□□□ -2.06
CXCL12P48061 HMGN2P30-201ENST00000423237 256 ntBASIC2.18□□□□□ -2.06
CXCL12P48061 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC2.18□□□□□ -2.06
CXCL12P48061 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC2.18□□□□□ -2.06
CXCL12P48061 SNORD121B-201ENST00000458838 81 ntBASIC2.18□□□□□ -2.06
CXCL12P48061 AL049714.1-201ENST00000466686 347 ntBASIC2.18□□□□□ -2.06
CXCL12P48061 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC2.18□□□□□ -2.06
CXCL12P48061 DEFB108D-201ENST00000527787 222 ntBASIC2.18□□□□□ -2.06
CXCL12P48061 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC2.18□□□□□ -2.06
CXCL12P48061 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC2.18□□□□□ -2.06
CXCL12P48061 AL158211.4-201ENST00000606988 584 ntBASIC2.18□□□□□ -2.06
CXCL12P48061 AC006213.4-201ENST00000616184 634 ntBASIC2.18□□□□□ -2.06
CXCL12P48061 AC022960.3-201ENST00000619794 441 ntBASIC2.18□□□□□ -2.06
CXCL12P48061 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.18□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms