Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC0.8□□□□□ -2.28
HTTP42858 AL031663.1-201ENST00000437445 219 ntBASIC0.8□□□□□ -2.28
HTTP42858 RNU2-44P-201ENST00000516795 194 ntBASIC0.8□□□□□ -2.28
HTTP42858 RNU1-104P-201ENST00000517280 175 ntBASIC0.8□□□□□ -2.28
HTTP42858 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC0.8□□□□□ -2.28
HTTP42858 RNU6-146P-201ENST00000384602 108 ntBASIC0.8□□□□□ -2.28
HTTP42858 NDUFAF4P1-201ENST00000559425 519 ntBASIC0.8□□□□□ -2.28
HTTP42858 Xist_exon1.1-201ENST00000618930 85 ntBASIC0.8□□□□□ -2.28
HTTP42858 RPS20P15-201ENST00000412792 311 ntBASIC0.79□□□□□ -2.28
HTTP42858 BX682237.1-201ENST00000415016 335 ntBASIC0.79□□□□□ -2.28
HTTP42858 ZNF90P2-204ENST00000419323 1075 ntBASIC0.79□□□□□ -2.28
HTTP42858 MTCO3P46-201ENST00000425787 232 ntBASIC0.79□□□□□ -2.28
HTTP42858 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC0.79□□□□□ -2.28
HTTP42858 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC0.79□□□□□ -2.28
HTTP42858 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC0.79□□□□□ -2.28
HTTP42858 AP000648.3-201ENST00000623539 4507 ntBASIC0.79□□□□□ -2.28
HTTP42858 RNA5SP511-201ENST00000410487 115 ntBASIC0.79□□□□□ -2.28
HTTP42858 AC243829.6-201ENST00000612652 106 ntBASIC0.79□□□□□ -2.28
HTTP42858 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC0.79□□□□□ -2.28
HTTP42858 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC0.78□□□□□ -2.28
HTTP42858 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC0.78□□□□□ -2.28
HTTP42858 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC0.78□□□□□ -2.28
HTTP42858 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC0.78□□□□□ -2.28
HTTP42858 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC0.78□□□□□ -2.28
HTTP42858 HMGN1P30-201ENST00000589286 268 ntBASIC0.78□□□□□ -2.28
HTTP42858 BNIP3P26-201ENST00000600827 554 ntBASIC0.78□□□□□ -2.28
HTTP42858 AL031601.2-202ENST00000622650 282 ntBASIC0.78□□□□□ -2.28
HTTP42858 IL33-203ENST00000456383 2501 ntTSL 5 BASIC0.78□□□□□ -2.28
HTTP42858 Z95118.1-201ENST00000421372 247 ntBASIC0.78□□□□□ -2.28
HTTP42858 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC0.78□□□□□ -2.28
HTTP42858 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC0.78□□□□□ -2.28
HTTP42858 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC0.78□□□□□ -2.28
HTTP42858 AP001180.3-201ENST00000582221 145 ntBASIC0.78□□□□□ -2.28
HTTP42858 Y_RNA.457-201ENST00000384237 111 ntBASIC0.78□□□□□ -2.29
HTTP42858 RNU1-101P-201ENST00000391171 127 ntBASIC0.78□□□□□ -2.29
HTTP42858 HSFY3P-201ENST00000444242 1191 ntBASIC0.78□□□□□ -2.29
HTTP42858 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC0.78□□□□□ -2.29
HTTP42858 RPS20P20-201ENST00000460498 340 ntBASIC0.78□□□□□ -2.29
HTTP42858 MRPL42P6-201ENST00000486397 371 ntBASIC0.78□□□□□ -2.29
HTTP42858 MTCO1P30-201ENST00000515244 580 ntBASIC0.78□□□□□ -2.29
HTTP42858 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC0.78□□□□□ -2.29
HTTP42858 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC0.77□□□□□ -2.29
HTTP42858 SUCLA2P2-201ENST00000417269 1309 ntBASIC0.77□□□□□ -2.29
HTTP42858 RNU6-178P-201ENST00000384631 104 ntBASIC0.77□□□□□ -2.29
HTTP42858 SNORD116-26-201ENST00000516006 96 ntBASIC0.77□□□□□ -2.29
HTTP42858 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC0.77□□□□□ -2.29
HTTP42858 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC0.77□□□□□ -2.29
HTTP42858 RNU6-84P-201ENST00000607737 102 ntBASIC0.77□□□□□ -2.29
HTTP42858 AC020658.4-201ENST00000613987 684 ntBASIC0.77□□□□□ -2.29
HTTP42858 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC0.77□□□□□ -2.29
HTTP42858 RNA5SP167-201ENST00000365461 116 ntBASIC0.77□□□□□ -2.29
HTTP42858 HSPE1P1-201ENST00000421494 318 ntBASIC0.77□□□□□ -2.29
HTTP42858 HMGN1P10-201ENST00000474557 553 ntBASIC0.77□□□□□ -2.29
HTTP42858 AC026801.1-201ENST00000497178 464 ntBASIC0.77□□□□□ -2.29
HTTP42858 CD24P2-201ENST00000565486 219 ntBASIC0.77□□□□□ -2.29
HTTP42858 RPS15AP11-201ENST00000594193 385 ntBASIC0.77□□□□□ -2.29
HTTP42858 AC000123.2-201ENST00000623124 461 ntBASIC0.77□□□□□ -2.29
HTTP42858 RUFY2-201ENST00000265865 2033 ntTSL 2 BASIC0.76□□□□□ -2.29
HTTP42858 ZBTB8OSP1-201ENST00000342688 498 ntBASIC0.76□□□□□ -2.29
HTTP42858 RNA5SP347-201ENST00000362445 119 ntBASIC0.76□□□□□ -2.29
HTTP42858 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC0.76□□□□□ -2.29
HTTP42858 AC117503.1-201ENST00000472241 394 ntBASIC0.76□□□□□ -2.29
HTTP42858 HMGB1P24-202ENST00000615653 685 ntBASIC0.76□□□□□ -2.29
HTTP42858 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC0.76□□□□□ -2.29
HTTP42858 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC0.76□□□□□ -2.29
HTTP42858 NAP1L1P3-201ENST00000462291 880 ntBASIC0.76□□□□□ -2.29
HTTP42858 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC0.76□□□□□ -2.29
HTTP42858 YWHAQP7-201ENST00000603536 658 ntBASIC0.76□□□□□ -2.29
HTTP42858 AC068787.1-201ENST00000623908 691 ntBASIC0.76□□□□□ -2.29
HTTP42858 HSPE1P26-201ENST00000405341 275 ntBASIC0.75□□□□□ -2.29
HTTP42858 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.75□□□□□ -2.29
HTTP42858 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC0.75□□□□□ -2.29
HTTP42858 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC0.75□□□□□ -2.29
HTTP42858 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC0.75□□□□□ -2.29
HTTP42858 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC0.75□□□□□ -2.29
HTTP42858 AC004943.3-201ENST00000624116 600 ntBASIC0.75□□□□□ -2.29
HTTP42858 AC138915.1-201ENST00000565427 1685 ntBASIC0.75□□□□□ -2.29
HTTP42858 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC0.75□□□□□ -2.29
HTTP42858 UBE2FP3-201ENST00000436366 524 ntBASIC0.75□□□□□ -2.29
HTTP42858 Z96811.1-201ENST00000445880 108 ntBASIC0.75□□□□□ -2.29
HTTP42858 AC104308.1-201ENST00000454621 333 ntBASIC0.75□□□□□ -2.29
HTTP42858 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC0.75□□□□□ -2.29
HTTP42858 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC0.75□□□□□ -2.29
HTTP42858 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC0.75□□□□□ -2.29
HTTP42858 MIR4653-201ENST00000585107 83 ntBASIC0.75□□□□□ -2.29
HTTP42858 AC022387.2-201ENST00000604050 448 ntBASIC0.75□□□□□ -2.29
HTTP42858 AC091304.6-201ENST00000619761 202 ntBASIC0.75□□□□□ -2.29
HTTP42858 ZNF702P-202ENST00000434269 1966 ntBASIC0.75□□□□□ -2.29
HTTP42858 RNU6-30P-201ENST00000384561 107 ntBASIC0.75□□□□□ -2.29
HTTP42858 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC0.75□□□□□ -2.29
HTTP42858 SUMO2P2-201ENST00000456482 255 ntBASIC0.75□□□□□ -2.29
HTTP42858 RBM43P1-201ENST00000476891 1081 ntBASIC0.75□□□□□ -2.29
HTTP42858 AL118508.4-201ENST00000624142 1176 ntBASIC0.75□□□□□ -2.29
HTTP42858 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC0.74□□□□□ -2.29
HTTP42858 AC007785.2-201ENST00000598627 1916 ntBASIC0.74□□□□□ -2.29
HTTP42858 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC0.74□□□□□ -2.29
HTTP42858 SDCBPP1-201ENST00000440192 890 ntBASIC0.74□□□□□ -2.29
HTTP42858 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC0.74□□□□□ -2.29
HTTP42858 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC0.74□□□□□ -2.29
HTTP42858 AC068446.3-201ENST00000555285 382 ntBASIC0.74□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms