Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 SETP5-201ENST00000437270 562 ntBASIC4□□□□□ -1.77
COL15A1P39059 AL121871.1-201ENST00000443413 436 ntBASIC4□□□□□ -1.77
COL15A1P39059 HMGN2P21-201ENST00000447764 270 ntBASIC4□□□□□ -1.77
COL15A1P39059 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC4□□□□□ -1.77
COL15A1P39059 AC132479.1-201ENST00000449160 144 ntBASIC4□□□□□ -1.77
COL15A1P39059 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC4□□□□□ -1.77
COL15A1P39059 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC4□□□□□ -1.77
COL15A1P39059 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC4□□□□□ -1.77
COL15A1P39059 AC078817.1-201ENST00000492623 435 ntBASIC4□□□□□ -1.77
COL15A1P39059 AC009646.1-201ENST00000510455 318 ntBASIC4□□□□□ -1.77
COL15A1P39059 RNA5SP356-201ENST00000515972 94 ntBASIC4□□□□□ -1.77
COL15A1P39059 RNU6-1178P-201ENST00000516674 107 ntBASIC4□□□□□ -1.77
COL15A1P39059 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC4□□□□□ -1.77
COL15A1P39059 AHI1-217ENST00000534469 680 ntTSL 3 BASIC4□□□□□ -1.77
COL15A1P39059 OR4T1P-201ENST00000554933 911 ntBASIC4□□□□□ -1.77
COL15A1P39059 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC4□□□□□ -1.77
COL15A1P39059 IGKV1OR2-6-201ENST00000603485 277 ntBASIC4□□□□□ -1.77
COL15A1P39059 AC092954.2-201ENST00000609103 430 ntBASIC4□□□□□ -1.77
COL15A1P39059 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC4□□□□□ -1.77
COL15A1P39059 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4□□□□□ -1.77
COL15A1P39059 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4□□□□□ -1.77
COL15A1P39059 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC3.99□□□□□ -1.77
COL15A1P39059 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.99□□□□□ -1.77
COL15A1P39059 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
COL15A1P39059 OR5J1P-201ENST00000313544 939 ntBASIC3.99□□□□□ -1.77
COL15A1P39059 RNU4-1-201ENST00000363925 141 ntBASIC3.99□□□□□ -1.77
COL15A1P39059 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC3.99□□□□□ -1.77
COL15A1P39059 RNU6-1103P-201ENST00000384150 107 ntBASIC3.99□□□□□ -1.77
COL15A1P39059 MIR184-201ENST00000384962 84 ntBASIC3.99□□□□□ -1.77
COL15A1P39059 CALM2P3-201ENST00000400429 449 ntBASIC3.99□□□□□ -1.77
COL15A1P39059 AL583834.1-201ENST00000406943 343 ntBASIC3.99□□□□□ -1.77
COL15A1P39059 MIR1183-201ENST00000408856 89 ntBASIC3.99□□□□□ -1.77
COL15A1P39059 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC3.99□□□□□ -1.77
COL15A1P39059 BX679664.1-201ENST00000434429 253 ntBASIC3.99□□□□□ -1.77
COL15A1P39059 AC016696.1-201ENST00000446949 318 ntBASIC3.99□□□□□ -1.77
COL15A1P39059 AC013267.1-201ENST00000458227 267 ntBASIC3.99□□□□□ -1.77
COL15A1P39059 AL049714.1-201ENST00000466686 347 ntBASIC3.99□□□□□ -1.77
COL15A1P39059 AL121769.1-201ENST00000469473 401 ntBASIC3.99□□□□□ -1.77
COL15A1P39059 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC3.99□□□□□ -1.77
COL15A1P39059 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC3.99□□□□□ -1.77
COL15A1P39059 AC105914.1-201ENST00000511798 226 ntBASIC3.99□□□□□ -1.77
COL15A1P39059 AC114797.1-201ENST00000514003 728 ntBASIC3.99□□□□□ -1.77
COL15A1P39059 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC3.99□□□□□ -1.77
COL15A1P39059 AC026801.2-201ENST00000515352 425 ntBASIC3.99□□□□□ -1.77
COL15A1P39059 RNU6-1095P-201ENST00000516148 108 ntBASIC3.99□□□□□ -1.77
COL15A1P39059 AC011979.2-201ENST00000527568 352 ntBASIC3.99□□□□□ -1.77
COL15A1P39059 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.99□□□□□ -1.77
COL15A1P39059 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC3.99□□□□□ -1.77
COL15A1P39059 CBX3P5-201ENST00000552017 521 ntBASIC3.99□□□□□ -1.77
COL15A1P39059 MIR622-201ENST00000638396 96 ntBASIC3.99□□□□□ -1.77
COL15A1P39059 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.99□□□□□ -1.77
COL15A1P39059 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.99□□□□□ -1.77
COL15A1P39059 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
COL15A1P39059 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
COL15A1P39059 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
COL15A1P39059 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
COL15A1P39059 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
COL15A1P39059 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.98□□□□□ -1.77
COL15A1P39059 SNORA71.1-201ENST00000364523 117 ntBASIC3.98□□□□□ -1.77
COL15A1P39059 Y_RNA.409-201ENST00000383990 98 ntBASIC3.98□□□□□ -1.77
COL15A1P39059 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
COL15A1P39059 RN7SKP220-201ENST00000410611 288 ntBASIC3.98□□□□□ -1.77
COL15A1P39059 CST9LP2-201ENST00000437612 320 ntBASIC3.98□□□□□ -1.77
COL15A1P39059 AL138799.3-201ENST00000438968 350 ntBASIC3.98□□□□□ -1.77
COL15A1P39059 HMGB3P11-201ENST00000440127 604 ntBASIC3.98□□□□□ -1.77
COL15A1P39059 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC3.98□□□□□ -1.77
COL15A1P39059 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
COL15A1P39059 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC3.98□□□□□ -1.77
COL15A1P39059 AC093278.1-201ENST00000494700 600 ntBASIC3.98□□□□□ -1.77
COL15A1P39059 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC3.98□□□□□ -1.77
COL15A1P39059 AC005921.1-201ENST00000510589 286 ntBASIC3.98□□□□□ -1.77
COL15A1P39059 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC3.98□□□□□ -1.77
COL15A1P39059 AC022616.3-201ENST00000523940 148 ntBASIC3.98□□□□□ -1.77
COL15A1P39059 MTCYBP41-201ENST00000528913 1123 ntBASIC3.98□□□□□ -1.77
COL15A1P39059 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.98□□□□□ -1.77
COL15A1P39059 AC006270.2-201ENST00000578523 652 ntBASIC3.98□□□□□ -1.77
COL15A1P39059 MIR3945-201ENST00000581853 98 ntBASIC3.98□□□□□ -1.77
COL15A1P39059 SNORD84-203ENST00000584275 78 ntBASIC3.98□□□□□ -1.77
COL15A1P39059 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.98□□□□□ -1.77
COL15A1P39059 AP001429.1-201ENST00000602568 530 ntBASIC3.98□□□□□ -1.77
COL15A1P39059 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC3.98□□□□□ -1.77
COL15A1P39059 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
COL15A1P39059 AL157700.1-201ENST00000561973 1432 ntBASIC3.97□□□□□ -1.77
COL15A1P39059 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
COL15A1P39059 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.97□□□□□ -1.77
COL15A1P39059 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
COL15A1P39059 RNU6-1085P-201ENST00000363576 107 ntBASIC3.97□□□□□ -1.77
COL15A1P39059 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.97□□□□□ -1.77
COL15A1P39059 RNU6-1181P-201ENST00000384191 106 ntBASIC3.97□□□□□ -1.77
COL15A1P39059 SNORD67-201ENST00000390833 111 ntBASIC3.97□□□□□ -1.77
COL15A1P39059 EI24P1-201ENST00000416584 867 ntBASIC3.97□□□□□ -1.77
COL15A1P39059 AC244098.2-201ENST00000422068 99 ntBASIC3.97□□□□□ -1.77
COL15A1P39059 MTND4LP11-201ENST00000422184 280 ntBASIC3.97□□□□□ -1.77
COL15A1P39059 ELOCP14-201ENST00000428070 331 ntBASIC3.97□□□□□ -1.77
COL15A1P39059 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC3.97□□□□□ -1.77
COL15A1P39059 ELOCP7-201ENST00000439968 331 ntBASIC3.97□□□□□ -1.77
COL15A1P39059 AC003071.1-201ENST00000451219 789 ntBASIC3.97□□□□□ -1.77
COL15A1P39059 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC3.97□□□□□ -1.77
COL15A1P39059 MTCO3P38-201ENST00000468910 766 ntBASIC3.97□□□□□ -1.77
COL15A1P39059 AC092989.1-201ENST00000481235 277 ntBASIC3.97□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 97.4 ms