Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 MTCYBP1-201ENST00000454315 1119 ntBASIC3.36□□□□□ -1.87
HOXC8P31273 AL359385.1-201ENST00000456509 365 ntBASIC3.36□□□□□ -1.87
HOXC8P31273 SRRM1P2-201ENST00000464531 1192 ntBASIC3.36□□□□□ -1.87
HOXC8P31273 MTND4LP22-201ENST00000508209 276 ntBASIC3.36□□□□□ -1.87
HOXC8P31273 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC3.36□□□□□ -1.87
HOXC8P31273 AL117351.2-201ENST00000513571 157 ntBASIC3.36□□□□□ -1.87
HOXC8P31273 AC091826.1-201ENST00000514065 313 ntBASIC3.36□□□□□ -1.87
HOXC8P31273 RNA5SP356-201ENST00000515972 94 ntBASIC3.36□□□□□ -1.87
HOXC8P31273 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC3.36□□□□□ -1.87
HOXC8P31273 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
HOXC8P31273 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC3.36□□□□□ -1.87
HOXC8P31273 AC027807.1-201ENST00000559921 996 ntBASIC3.36□□□□□ -1.87
HOXC8P31273 MIR4425-201ENST00000580572 84 ntBASIC3.36□□□□□ -1.87
HOXC8P31273 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.36□□□□□ -1.87
HOXC8P31273 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC3.36□□□□□ -1.87
HOXC8P31273 BNIP3P8-201ENST00000597863 560 ntBASIC3.36□□□□□ -1.87
HOXC8P31273 NDUFA8P1-201ENST00000605525 367 ntBASIC3.36□□□□□ -1.87
HOXC8P31273 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC3.36□□□□□ -1.87
HOXC8P31273 AC092628.2-201ENST00000622492 339 ntBASIC3.36□□□□□ -1.87
HOXC8P31273 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC3.36□□□□□ -1.87
HOXC8P31273 AC091903.1-201ENST00000624322 454 ntBASIC3.36□□□□□ -1.87
HOXC8P31273 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
HOXC8P31273 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.36□□□□□ -1.87
HOXC8P31273 AC092447.7-201ENST00000422212 1621 ntBASIC3.36□□□□□ -1.87
HOXC8P31273 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.36□□□□□ -1.87
HOXC8P31273 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.36□□□□□ -1.87
HOXC8P31273 SDAD1P2-201ENST00000441308 2028 ntBASIC3.36□□□□□ -1.87
HOXC8P31273 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC3.36□□□□□ -1.87
HOXC8P31273 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.35□□□□□ -1.87
HOXC8P31273 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
HOXC8P31273 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.35□□□□□ -1.87
HOXC8P31273 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.35□□□□□ -1.87
HOXC8P31273 RNU5E-8P-201ENST00000363502 116 ntBASIC3.35□□□□□ -1.87
HOXC8P31273 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC3.35□□□□□ -1.87
HOXC8P31273 Y_RNA.598-201ENST00000410480 95 ntBASIC3.35□□□□□ -1.87
HOXC8P31273 RNA5SP38-201ENST00000410750 119 ntBASIC3.35□□□□□ -1.87
HOXC8P31273 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.35□□□□□ -1.87
HOXC8P31273 USP9YP13-201ENST00000417797 480 ntBASIC3.35□□□□□ -1.87
HOXC8P31273 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC3.35□□□□□ -1.87
HOXC8P31273 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
HOXC8P31273 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC3.35□□□□□ -1.87
HOXC8P31273 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.35□□□□□ -1.87
HOXC8P31273 RNU6-798P-201ENST00000516912 103 ntBASIC3.35□□□□□ -1.87
HOXC8P31273 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC3.35□□□□□ -1.87
HOXC8P31273 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC3.35□□□□□ -1.87
HOXC8P31273 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.35□□□□□ -1.87
HOXC8P31273 ZNF519P3-201ENST00000557158 1032 ntBASIC3.35□□□□□ -1.87
HOXC8P31273 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.35□□□□□ -1.87
HOXC8P31273 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.35□□□□□ -1.87
HOXC8P31273 MIR3162-201ENST00000581818 82 ntBASIC3.35□□□□□ -1.87
HOXC8P31273 AC060771.1-201ENST00000582031 164 ntBASIC3.35□□□□□ -1.87
HOXC8P31273 AC091965.4-201ENST00000607691 587 ntBASIC3.35□□□□□ -1.87
HOXC8P31273 AC108747.1-201ENST00000609508 535 ntBASIC3.35□□□□□ -1.87
HOXC8P31273 AC087241.4-201ENST00000612441 480 ntBASIC3.35□□□□□ -1.87
HOXC8P31273 AC008250.2-201ENST00000615261 205 ntBASIC3.35□□□□□ -1.87
HOXC8P31273 AC019226.1-201ENST00000625666 515 ntBASIC3.35□□□□□ -1.87
HOXC8P31273 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.35□□□□□ -1.87
HOXC8P31273 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
HOXC8P31273 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.35□□□□□ -1.87
HOXC8P31273 AC096644.4-201ENST00000563417 2912 ntBASIC3.35□□□□□ -1.87
HOXC8P31273 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC3.35□□□□□ -1.87
HOXC8P31273 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
HOXC8P31273 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC3.35□□□□□ -1.87
HOXC8P31273 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC3.34□□□□□ -1.87
HOXC8P31273 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.34□□□□□ -1.87
HOXC8P31273 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.34□□□□□ -1.87
HOXC8P31273 SNORA5B-201ENST00000363786 132 ntBASIC3.34□□□□□ -1.87
HOXC8P31273 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
HOXC8P31273 RNU6-1042P-201ENST00000384204 107 ntBASIC3.34□□□□□ -1.87
HOXC8P31273 Y_RNA.516-201ENST00000384541 124 ntBASIC3.34□□□□□ -1.87
HOXC8P31273 Y_RNA.548-201ENST00000384656 105 ntBASIC3.34□□□□□ -1.87
HOXC8P31273 UBE2V1P2-201ENST00000397758 440 ntBASIC3.34□□□□□ -1.87
HOXC8P31273 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.34□□□□□ -1.87
HOXC8P31273 AL139281.1-201ENST00000422120 335 ntBASIC3.34□□□□□ -1.87
HOXC8P31273 AC010975.2-201ENST00000427781 588 ntBASIC3.34□□□□□ -1.87
HOXC8P31273 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC3.34□□□□□ -1.87
HOXC8P31273 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC3.34□□□□□ -1.87
HOXC8P31273 AC244505.5-201ENST00000443639 207 ntBASIC3.34□□□□□ -1.87
HOXC8P31273 AC009237.8-201ENST00000445492 379 ntBASIC3.34□□□□□ -1.87
HOXC8P31273 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC3.34□□□□□ -1.87
HOXC8P31273 AL033528.1-201ENST00000453780 140 ntBASIC3.34□□□□□ -1.87
HOXC8P31273 SNRPFP4-201ENST00000456366 242 ntBASIC3.34□□□□□ -1.87
HOXC8P31273 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC3.34□□□□□ -1.87
HOXC8P31273 SNORD42A-201ENST00000459584 64 ntBASIC3.34□□□□□ -1.87
HOXC8P31273 AC010401.1-201ENST00000463867 348 ntBASIC3.34□□□□□ -1.87
HOXC8P31273 KLF3P2-201ENST00000465138 268 ntBASIC3.34□□□□□ -1.87
HOXC8P31273 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
HOXC8P31273 RPL30P5-201ENST00000494923 336 ntBASIC3.34□□□□□ -1.87
HOXC8P31273 AC083906.5-201ENST00000503722 328 ntBASIC3.34□□□□□ -1.87
HOXC8P31273 MTND2P33-201ENST00000506452 1031 ntBASIC3.34□□□□□ -1.87
HOXC8P31273 HIGD1AP13-201ENST00000509878 289 ntBASIC3.34□□□□□ -1.87
HOXC8P31273 RNU1-143P-201ENST00000516296 146 ntBASIC3.34□□□□□ -1.87
HOXC8P31273 SNORA31.22-201ENST00000517204 135 ntBASIC3.34□□□□□ -1.87
HOXC8P31273 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC3.34□□□□□ -1.87
HOXC8P31273 EIF1P4-201ENST00000572664 335 ntBASIC3.34□□□□□ -1.87
HOXC8P31273 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.34□□□□□ -1.87
HOXC8P31273 TPMTP1-201ENST00000592307 737 ntBASIC3.34□□□□□ -1.87
HOXC8P31273 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC3.34□□□□□ -1.87
HOXC8P31273 AC112191.3-201ENST00000604371 277 ntBASIC3.34□□□□□ -1.87
HOXC8P31273 U1.23-201ENST00000610293 146 ntBASIC3.34□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 114 ms