Protein–RNA interactions for Protein: P29965

CD40LG, CD40 ligand, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40LGP29965 AC022662.1-201ENST00000580252 331 ntBASIC1.91□□□□□ -2.1
CD40LGP29965 MIR4435-1-201ENST00000582552 80 ntBASIC1.91□□□□□ -2.1
CD40LGP29965 AP001542.2-201ENST00000593141 364 ntBASIC1.91□□□□□ -2.1
CD40LGP29965 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.91□□□□□ -2.1
CD40LGP29965 AL033523.1-201ENST00000605153 153 ntBASIC1.91□□□□□ -2.1
CD40LGP29965 AC103810.6-201ENST00000606708 136 ntBASIC1.91□□□□□ -2.1
CD40LGP29965 AC239868.4-201ENST00000608318 671 ntBASIC1.91□□□□□ -2.1
CD40LGP29965 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC1.91□□□□□ -2.1
CD40LGP29965 AC024257.5-201ENST00000612739 531 ntBASIC1.91□□□□□ -2.1
CD40LGP29965 AL118556.2-201ENST00000614375 824 ntBASIC1.91□□□□□ -2.1
CD40LGP29965 AC084824.4-201ENST00000620106 731 ntBASIC1.91□□□□□ -2.1
CD40LGP29965 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.91□□□□□ -2.1
CD40LGP29965 AC008555.8-201ENST00000623602 2168 ntBASIC1.91□□□□□ -2.1
CD40LGP29965 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.9□□□□□ -2.1
CD40LGP29965 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.1
CD40LGP29965 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC1.9□□□□□ -2.11
CD40LGP29965 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
CD40LGP29965 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
CD40LGP29965 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC1.9□□□□□ -2.11
CD40LGP29965 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC1.9□□□□□ -2.11
CD40LGP29965 U6.112-201ENST00000384129 70 ntBASIC1.9□□□□□ -2.11
CD40LGP29965 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC1.9□□□□□ -2.11
CD40LGP29965 AC027644.1-201ENST00000419595 298 ntBASIC1.9□□□□□ -2.11
CD40LGP29965 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC1.9□□□□□ -2.11
CD40LGP29965 UBE2D3P1-201ENST00000436669 444 ntBASIC1.9□□□□□ -2.11
CD40LGP29965 AL451074.3-201ENST00000437709 472 ntBASIC1.9□□□□□ -2.11
CD40LGP29965 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.9□□□□□ -2.11
CD40LGP29965 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC1.9□□□□□ -2.11
CD40LGP29965 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.9□□□□□ -2.11
CD40LGP29965 RPL21P134-201ENST00000453468 483 ntBASIC1.9□□□□□ -2.11
CD40LGP29965 MTCO1P42-201ENST00000457379 726 ntBASIC1.9□□□□□ -2.11
CD40LGP29965 AC107032.1-201ENST00000485945 480 ntBASIC1.9□□□□□ -2.11
CD40LGP29965 OR4G11P-201ENST00000492842 939 ntBASIC1.9□□□□□ -2.11
CD40LGP29965 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC1.9□□□□□ -2.11
CD40LGP29965 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC1.9□□□□□ -2.11
CD40LGP29965 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC1.9□□□□□ -2.11
CD40LGP29965 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC1.9□□□□□ -2.11
CD40LGP29965 AC023632.1-201ENST00000518463 375 ntBASIC1.9□□□□□ -2.11
CD40LGP29965 CBX3P7-201ENST00000532876 502 ntBASIC1.9□□□□□ -2.11
CD40LGP29965 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC1.9□□□□□ -2.11
CD40LGP29965 AC234778.2-201ENST00000566241 354 ntBASIC1.9□□□□□ -2.11
CD40LGP29965 MIR4287-201ENST00000579398 78 ntBASIC1.9□□□□□ -2.11
CD40LGP29965 LRRC37A5P-203ENST00000580181 585 ntBASIC1.9□□□□□ -2.11
CD40LGP29965 AC024619.4-201ENST00000580924 316 ntBASIC1.9□□□□□ -2.11
CD40LGP29965 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC1.9□□□□□ -2.11
CD40LGP29965 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC1.9□□□□□ -2.11
CD40LGP29965 AF131215.7-201ENST00000602443 707 ntBASIC1.9□□□□□ -2.11
CD40LGP29965 AC012493.3-201ENST00000604494 112 ntBASIC1.9□□□□□ -2.11
CD40LGP29965 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC1.9□□□□□ -2.11
CD40LGP29965 AC024581.2-201ENST00000619986 252 ntBASIC1.9□□□□□ -2.11
CD40LGP29965 Y_RNA.25-201ENST00000362528 102 ntBASIC1.89□□□□□ -2.11
CD40LGP29965 RNU1-91P-201ENST00000364746 163 ntBASIC1.89□□□□□ -2.11
CD40LGP29965 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
CD40LGP29965 UBE2V1P2-201ENST00000397758 440 ntBASIC1.89□□□□□ -2.11
CD40LGP29965 AL512604.1-201ENST00000404812 257 ntBASIC1.89□□□□□ -2.11
CD40LGP29965 GSTA9P-201ENST00000406231 611 ntBASIC1.89□□□□□ -2.11
CD40LGP29965 CCNG1P1-201ENST00000406783 885 ntBASIC1.89□□□□□ -2.11
CD40LGP29965 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC1.89□□□□□ -2.11
CD40LGP29965 MTCO2P5-201ENST00000422621 426 ntBASIC1.89□□□□□ -2.11
CD40LGP29965 DEFB130D-201ENST00000426866 237 ntBASIC1.89□□□□□ -2.11
CD40LGP29965 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC1.89□□□□□ -2.11
CD40LGP29965 AC092427.1-201ENST00000439177 601 ntBASIC1.89□□□□□ -2.11
CD40LGP29965 SEPT14P24-201ENST00000447236 180 ntBASIC1.89□□□□□ -2.11
CD40LGP29965 PMCHL2-203ENST00000457791 237 ntBASIC1.89□□□□□ -2.11
CD40LGP29965 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC1.89□□□□□ -2.11
CD40LGP29965 TMEM251P1-201ENST00000503717 318 ntBASIC1.89□□□□□ -2.11
CD40LGP29965 AC234781.5-201ENST00000508429 271 ntBASIC1.89□□□□□ -2.11
CD40LGP29965 AC008526.1-201ENST00000509149 338 ntBASIC1.89□□□□□ -2.11
CD40LGP29965 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC1.89□□□□□ -2.11
CD40LGP29965 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC1.89□□□□□ -2.11
CD40LGP29965 AC093677.1-201ENST00000514414 678 ntBASIC1.89□□□□□ -2.11
CD40LGP29965 RNU4-29P-201ENST00000515943 174 ntBASIC1.89□□□□□ -2.11
CD40LGP29965 SNORD19.2-201ENST00000516978 73 ntBASIC1.89□□□□□ -2.11
CD40LGP29965 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC1.89□□□□□ -2.11
CD40LGP29965 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.89□□□□□ -2.11
CD40LGP29965 AP001189.2-201ENST00000527320 189 ntBASIC1.89□□□□□ -2.11
CD40LGP29965 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC1.89□□□□□ -2.11
CD40LGP29965 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC1.89□□□□□ -2.11
CD40LGP29965 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC1.89□□□□□ -2.11
CD40LGP29965 MIR4765-201ENST00000585007 77 ntBASIC1.89□□□□□ -2.11
CD40LGP29965 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC1.89□□□□□ -2.11
CD40LGP29965 AP001269.3-201ENST00000588718 329 ntBASIC1.89□□□□□ -2.11
CD40LGP29965 AC007938.3-201ENST00000604965 623 ntBASIC1.89□□□□□ -2.11
CD40LGP29965 AC100814.1-201ENST00000606963 623 ntBASIC1.89□□□□□ -2.11
CD40LGP29965 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC1.89□□□□□ -2.11
CD40LGP29965 AL138478.1-201ENST00000612252 832 ntBASIC1.89□□□□□ -2.11
CD40LGP29965 MIR3199-2-201ENST00000636243 86 ntBASIC1.89□□□□□ -2.11
CD40LGP29965 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
CD40LGP29965 AL356473.1-201ENST00000406203 1408 ntBASIC1.89□□□□□ -2.11
CD40LGP29965 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
CD40LGP29965 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC1.89□□□□□ -2.11
CD40LGP29965 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC1.88□□□□□ -2.11
CD40LGP29965 SNRPEP3-201ENST00000338402 276 ntBASIC1.88□□□□□ -2.11
CD40LGP29965 Y_RNA.500-201ENST00000384466 111 ntBASIC1.88□□□□□ -2.11
CD40LGP29965 AC002381.1-201ENST00000447049 280 ntBASIC1.88□□□□□ -2.11
CD40LGP29965 AL500527.1-201ENST00000448532 255 ntBASIC1.88□□□□□ -2.11
CD40LGP29965 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC1.88□□□□□ -2.11
CD40LGP29965 SNORD121B-201ENST00000458838 81 ntBASIC1.88□□□□□ -2.11
CD40LGP29965 RN7SL636P-201ENST00000497504 294 ntBASIC1.88□□□□□ -2.11
CD40LGP29965 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC1.88□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms