Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 AC079382.1-201ENST00000493346 557 ntBASIC3.33□□□□□ -1.88
ABCD3P28288 AC104619.4-201ENST00000510773 249 ntBASIC3.33□□□□□ -1.88
ABCD3P28288 SNORD27.1-201ENST00000516319 72 ntBASIC3.33□□□□□ -1.88
ABCD3P28288 RNA5SP165-201ENST00000517142 115 ntBASIC3.33□□□□□ -1.88
ABCD3P28288 UTP23-205ENST00000520733 369 ntTSL 3 BASIC3.33□□□□□ -1.88
ABCD3P28288 AP001646.1-201ENST00000527936 915 ntBASIC3.33□□□□□ -1.88
ABCD3P28288 OR4R1P-201ENST00000529879 463 ntBASIC3.33□□□□□ -1.88
ABCD3P28288 ADI1P3-201ENST00000549509 470 ntBASIC3.33□□□□□ -1.88
ABCD3P28288 SUB1P2-201ENST00000556401 297 ntBASIC3.33□□□□□ -1.88
ABCD3P28288 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC3.33□□□□□ -1.88
ABCD3P28288 MIR3158-1-201ENST00000583596 81 ntBASIC3.33□□□□□ -1.88
ABCD3P28288 DUSP12P1-201ENST00000612874 516 ntBASIC3.33□□□□□ -1.88
ABCD3P28288 AL161629.2-201ENST00000615347 275 ntBASIC3.33□□□□□ -1.88
ABCD3P28288 AC006133.1-201ENST00000617106 264 ntBASIC3.33□□□□□ -1.88
ABCD3P28288 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.33□□□□□ -1.88
ABCD3P28288 AL034408.1-202ENST00000636088 415 ntBASIC3.33□□□□□ -1.88
ABCD3P28288 AC007823.1-201ENST00000569932 1566 ntBASIC3.33□□□□□ -1.88
ABCD3P28288 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.33□□□□□ -1.88
ABCD3P28288 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
ABCD3P28288 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
ABCD3P28288 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
ABCD3P28288 MAPK10-362ENST00000641864 4484 ntBASIC3.32□□□□□ -1.88
ABCD3P28288 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
ABCD3P28288 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
ABCD3P28288 RNU6-259P-201ENST00000383999 107 ntBASIC3.32□□□□□ -1.88
ABCD3P28288 RNU6-74P-201ENST00000384235 107 ntBASIC3.32□□□□□ -1.88
ABCD3P28288 SNORD116-4-201ENST00000384733 96 ntBASIC3.32□□□□□ -1.88
ABCD3P28288 MIR184-201ENST00000384962 84 ntBASIC3.32□□□□□ -1.88
ABCD3P28288 SNORA48.7-201ENST00000391302 135 ntBASIC3.32□□□□□ -1.88
ABCD3P28288 RN7SKP285-201ENST00000410137 318 ntBASIC3.32□□□□□ -1.88
ABCD3P28288 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
ABCD3P28288 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.32□□□□□ -1.88
ABCD3P28288 AL592045.1-201ENST00000429867 352 ntBASIC3.32□□□□□ -1.88
ABCD3P28288 MTATP6P16-201ENST00000434543 526 ntBASIC3.32□□□□□ -1.88
ABCD3P28288 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC3.32□□□□□ -1.88
ABCD3P28288 RPL12P25-201ENST00000455592 494 ntBASIC3.32□□□□□ -1.88
ABCD3P28288 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.32□□□□□ -1.88
ABCD3P28288 SLC25A15P5-201ENST00000508033 253 ntBASIC3.32□□□□□ -1.88
ABCD3P28288 AC108078.1-201ENST00000508073 725 ntBASIC3.32□□□□□ -1.88
ABCD3P28288 Y_RNA.689-201ENST00000516589 107 ntBASIC3.32□□□□□ -1.88
ABCD3P28288 SNORA67.7-201ENST00000516664 135 ntBASIC3.32□□□□□ -1.88
ABCD3P28288 SNORA31.21-201ENST00000517180 77 ntBASIC3.32□□□□□ -1.88
ABCD3P28288 AC026403.1-201ENST00000518938 295 ntBASIC3.32□□□□□ -1.88
ABCD3P28288 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
ABCD3P28288 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.32□□□□□ -1.88
ABCD3P28288 AC024619.4-201ENST00000580924 316 ntBASIC3.32□□□□□ -1.88
ABCD3P28288 AC010591.1-201ENST00000603941 649 ntBASIC3.32□□□□□ -1.88
ABCD3P28288 AL355598.1-201ENST00000604169 202 ntBASIC3.32□□□□□ -1.88
ABCD3P28288 AL136363.2-201ENST00000604173 851 ntBASIC3.32□□□□□ -1.88
ABCD3P28288 AC006077.1-201ENST00000604746 343 ntBASIC3.32□□□□□ -1.88
ABCD3P28288 AC012409.4-201ENST00000612923 249 ntBASIC3.32□□□□□ -1.88
ABCD3P28288 AC130324.3-201ENST00000614165 542 ntBASIC3.32□□□□□ -1.88
ABCD3P28288 AC025034.2-201ENST00000623264 286 ntBASIC3.32□□□□□ -1.88
ABCD3P28288 AC139792.2-201ENST00000624218 587 ntBASIC3.32□□□□□ -1.88
ABCD3P28288 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3.32□□□□□ -1.88
ABCD3P28288 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
ABCD3P28288 AC103710.2-202ENST00000641454 2853 ntBASIC3.32□□□□□ -1.88
ABCD3P28288 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.32□□□□□ -1.88
ABCD3P28288 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
ABCD3P28288 CEP170P1-201ENST00000502249 4587 ntBASIC3.32□□□□□ -1.88
ABCD3P28288 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.32□□□□□ -1.88
ABCD3P28288 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
ABCD3P28288 AC091564.4-201ENST00000533934 2194 ntBASIC3.31□□□□□ -1.88
ABCD3P28288 MTND5P26-201ENST00000426018 1752 ntBASIC3.31□□□□□ -1.88
ABCD3P28288 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
ABCD3P28288 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
ABCD3P28288 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
ABCD3P28288 FRG1CP-201ENST00000358464 769 ntBASIC3.31□□□□□ -1.88
ABCD3P28288 RNU6-799P-201ENST00000363567 107 ntBASIC3.31□□□□□ -1.88
ABCD3P28288 SNORA73.2-201ENST00000364946 201 ntBASIC3.31□□□□□ -1.88
ABCD3P28288 RNU6-61P-201ENST00000365528 109 ntBASIC3.31□□□□□ -1.88
ABCD3P28288 Y_RNA.534-201ENST00000384599 112 ntBASIC3.31□□□□□ -1.88
ABCD3P28288 MIR454-201ENST00000390180 115 ntBASIC3.31□□□□□ -1.88
ABCD3P28288 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC3.31□□□□□ -1.88
ABCD3P28288 AC114491.1-201ENST00000416095 246 ntBASIC3.31□□□□□ -1.88
ABCD3P28288 MRPL50P2-201ENST00000416821 482 ntBASIC3.31□□□□□ -1.88
ABCD3P28288 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.31□□□□□ -1.88
ABCD3P28288 HMGN2P30-201ENST00000423237 256 ntBASIC3.31□□□□□ -1.88
ABCD3P28288 CALM2P2-201ENST00000428512 440 ntBASIC3.31□□□□□ -1.88
ABCD3P28288 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC3.31□□□□□ -1.88
ABCD3P28288 AL714022.1-201ENST00000439897 151 ntBASIC3.31□□□□□ -1.88
ABCD3P28288 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC3.31□□□□□ -1.88
ABCD3P28288 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC3.31□□□□□ -1.88
ABCD3P28288 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
ABCD3P28288 DPPA3P1-201ENST00000448050 469 ntBASIC3.31□□□□□ -1.88
ABCD3P28288 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC3.31□□□□□ -1.88
ABCD3P28288 RPL21P129-201ENST00000491732 478 ntBASIC3.31□□□□□ -1.88
ABCD3P28288 AC026801.1-201ENST00000497178 464 ntBASIC3.31□□□□□ -1.88
ABCD3P28288 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC3.31□□□□□ -1.88
ABCD3P28288 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC3.31□□□□□ -1.88
ABCD3P28288 AC091435.1-201ENST00000505442 584 ntBASIC3.31□□□□□ -1.88
ABCD3P28288 MTND2P33-201ENST00000506452 1031 ntBASIC3.31□□□□□ -1.88
ABCD3P28288 Y_RNA.655-201ENST00000515919 96 ntBASIC3.31□□□□□ -1.88
ABCD3P28288 RNU6-914P-201ENST00000516749 109 ntBASIC3.31□□□□□ -1.88
ABCD3P28288 RNU6-579P-201ENST00000516879 102 ntBASIC3.31□□□□□ -1.88
ABCD3P28288 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC3.31□□□□□ -1.88
ABCD3P28288 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.31□□□□□ -1.88
ABCD3P28288 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
ABCD3P28288 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC3.31□□□□□ -1.88
ABCD3P28288 DNAJC8P1-201ENST00000554535 372 ntBASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 333.8 ms