Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CD40P25942 AL672167.1-204ENST00000641875 3017 ntBASIC3.91□□□□□ -1.78
CD40P25942 SNORD14B-201ENST00000364533 90 ntBASIC3.91□□□□□ -1.78
CD40P25942 MIR559-201ENST00000385188 96 ntBASIC3.91□□□□□ -1.78
CD40P25942 AL445529.1-201ENST00000398713 389 ntBASIC3.91□□□□□ -1.78
CD40P25942 AL592291.1-201ENST00000403830 352 ntBASIC3.91□□□□□ -1.78
CD40P25942 RPL5P18-201ENST00000406671 891 ntBASIC3.91□□□□□ -1.78
CD40P25942 Y_RNA.646-201ENST00000410980 101 ntBASIC3.91□□□□□ -1.78
CD40P25942 Y_RNA.623-201ENST00000411128 95 ntBASIC3.91□□□□□ -1.78
CD40P25942 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC3.91□□□□□ -1.78
CD40P25942 PGBD4P6-201ENST00000421501 610 ntBASIC3.91□□□□□ -1.78
CD40P25942 AC007560.1-201ENST00000426912 237 ntBASIC3.91□□□□□ -1.78
CD40P25942 RPS6P12-201ENST00000432491 726 ntBASIC3.91□□□□□ -1.78
CD40P25942 AC011998.1-201ENST00000433403 117 ntBASIC3.91□□□□□ -1.78
CD40P25942 SNRPEP9-201ENST00000436794 238 ntBASIC3.91□□□□□ -1.78
CD40P25942 AL356535.1-201ENST00000440335 398 ntBASIC3.91□□□□□ -1.78
CD40P25942 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC3.91□□□□□ -1.78
CD40P25942 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC3.91□□□□□ -1.78
CD40P25942 HMGB3P22-202ENST00000451823 572 ntBASIC3.91□□□□□ -1.78
CD40P25942 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC3.91□□□□□ -1.78
CD40P25942 RPL23AP24-201ENST00000458203 385 ntBASIC3.91□□□□□ -1.78
CD40P25942 RNU7-187P-201ENST00000458985 68 ntBASIC3.91□□□□□ -1.78
CD40P25942 RPL21P104-201ENST00000464143 478 ntBASIC3.91□□□□□ -1.78
CD40P25942 AC011276.1-201ENST00000469688 323 ntBASIC3.91□□□□□ -1.78
CD40P25942 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC3.91□□□□□ -1.78
CD40P25942 AC096576.1-201ENST00000489014 359 ntBASIC3.91□□□□□ -1.78
CD40P25942 RPL30P5-201ENST00000494923 336 ntBASIC3.91□□□□□ -1.78
CD40P25942 AC026782.1-201ENST00000512952 449 ntBASIC3.91□□□□□ -1.78
CD40P25942 Y_RNA.708-201ENST00000516950 96 ntBASIC3.91□□□□□ -1.78
CD40P25942 SNORA31.19-201ENST00000517079 126 ntBASIC3.91□□□□□ -1.78
CD40P25942 CASP1P1-201ENST00000526345 212 ntBASIC3.91□□□□□ -1.78
CD40P25942 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.91□□□□□ -1.78
CD40P25942 AC015912.2-201ENST00000571053 181 ntBASIC3.91□□□□□ -1.78
CD40P25942 AC018462.2-201ENST00000605375 395 ntBASIC3.91□□□□□ -1.78
CD40P25942 AP000654.2-201ENST00000605633 586 ntBASIC3.91□□□□□ -1.78
CD40P25942 AC009229.3-201ENST00000608056 282 ntBASIC3.91□□□□□ -1.78
CD40P25942 AC083809.1-201ENST00000615051 472 ntBASIC3.91□□□□□ -1.78
CD40P25942 AC133104.2-201ENST00000615272 193 ntBASIC3.91□□□□□ -1.78
CD40P25942 PISRT1.1-201ENST00000616930 107 ntBASIC3.91□□□□□ -1.78
CD40P25942 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC3.91□□□□□ -1.78
CD40P25942 ALG13-230ENST00000623189 458 ntTSL 3 BASIC3.91□□□□□ -1.78
CD40P25942 AC019278.1-201ENST00000623516 479 ntBASIC3.91□□□□□ -1.78
CD40P25942 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.91□□□□□ -1.78
CD40P25942 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC3.91□□□□□ -1.78
CD40P25942 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC3.91□□□□□ -1.78
CD40P25942 MTND5P19-201ENST00000424872 1794 ntBASIC3.91□□□□□ -1.78
CD40P25942 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CD40P25942 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CD40P25942 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CD40P25942 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.91□□□□□ -1.78
CD40P25942 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CD40P25942 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
CD40P25942 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC3.9□□□□□ -1.78
CD40P25942 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC3.9□□□□□ -1.78
CD40P25942 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
CD40P25942 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
CD40P25942 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.78
CD40P25942 CPHL1P-201ENST00000461341 3407 ntBASIC3.9□□□□□ -1.78
CD40P25942 AL359693.1-201ENST00000614959 2407 ntBASIC3.9□□□□□ -1.78
CD40P25942 AL049641.1-201ENST00000441055 1948 ntBASIC3.9□□□□□ -1.78
CD40P25942 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
CD40P25942 RNU1-83P-201ENST00000363426 164 ntBASIC3.9□□□□□ -1.79
CD40P25942 Y_RNA.216-201ENST00000364205 93 ntBASIC3.9□□□□□ -1.79
CD40P25942 RNA5SP509-201ENST00000364577 119 ntBASIC3.9□□□□□ -1.79
CD40P25942 RNU6-692P-201ENST00000384496 107 ntBASIC3.9□□□□□ -1.79
CD40P25942 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
CD40P25942 AL022722.2-201ENST00000402519 180 ntBASIC3.9□□□□□ -1.79
CD40P25942 Y_RNA.594-201ENST00000410373 140 ntBASIC3.9□□□□□ -1.79
CD40P25942 RNU6-1050P-201ENST00000410388 107 ntBASIC3.9□□□□□ -1.79
CD40P25942 RNU6-293P-201ENST00000411259 106 ntBASIC3.9□□□□□ -1.79
CD40P25942 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC3.9□□□□□ -1.79
CD40P25942 TMSB10P2-201ENST00000416049 131 ntBASIC3.9□□□□□ -1.79
CD40P25942 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
CD40P25942 Z82205.1-201ENST00000428456 297 ntBASIC3.9□□□□□ -1.79
CD40P25942 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC3.9□□□□□ -1.79
CD40P25942 AL645568.3-201ENST00000433683 316 ntBASIC3.9□□□□□ -1.79
CD40P25942 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC3.9□□□□□ -1.79
CD40P25942 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC3.9□□□□□ -1.79
CD40P25942 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.9□□□□□ -1.79
CD40P25942 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
CD40P25942 SNRPGP5-201ENST00000456003 220 ntBASIC3.9□□□□□ -1.79
CD40P25942 RNA5SP103-201ENST00000459503 118 ntBASIC3.9□□□□□ -1.79
CD40P25942 AL135752.1-201ENST00000479477 471 ntBASIC3.9□□□□□ -1.79
CD40P25942 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3.9□□□□□ -1.79
CD40P25942 RPL21P13-201ENST00000488305 481 ntBASIC3.9□□□□□ -1.79
CD40P25942 RN7SL810P-201ENST00000493031 276 ntBASIC3.9□□□□□ -1.79
CD40P25942 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC3.9□□□□□ -1.79
CD40P25942 Y_RNA.670-201ENST00000516255 105 ntBASIC3.9□□□□□ -1.79
CD40P25942 RNU6-572P-201ENST00000516724 80 ntBASIC3.9□□□□□ -1.79
CD40P25942 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC3.9□□□□□ -1.79
CD40P25942 IGKV2D-19-201ENST00000523346 262 ntBASIC3.9□□□□□ -1.79
CD40P25942 HMGB1P14-201ENST00000557424 591 ntBASIC3.9□□□□□ -1.79
CD40P25942 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC3.9□□□□□ -1.79
CD40P25942 SNRPGP17-201ENST00000603780 214 ntBASIC3.9□□□□□ -1.79
CD40P25942 AC007938.3-201ENST00000604965 623 ntBASIC3.9□□□□□ -1.79
CD40P25942 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC3.9□□□□□ -1.79
CD40P25942 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC3.9□□□□□ -1.79
CD40P25942 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
CD40P25942 OR51H2P-202ENST00000641424 3046 ntBASIC3.9□□□□□ -1.79
CD40P25942 MTND5P10-201ENST00000603719 1809 ntBASIC3.9□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 77.8 ms