Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC1.66□□□□□ -2.14
CCL1P22362 Z98742.2-201ENST00000431564 187 ntBASIC1.66□□□□□ -2.14
CCL1P22362 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
CCL1P22362 AC098831.1-201ENST00000440661 216 ntBASIC1.66□□□□□ -2.14
CCL1P22362 RPL7P36-201ENST00000444633 681 ntBASIC1.66□□□□□ -2.14
CCL1P22362 KLF3P2-201ENST00000465138 268 ntBASIC1.66□□□□□ -2.14
CCL1P22362 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC1.66□□□□□ -2.14
CCL1P22362 DYNLL1P5-201ENST00000467158 270 ntBASIC1.66□□□□□ -2.14
CCL1P22362 AC106872.3-201ENST00000495104 446 ntBASIC1.66□□□□□ -2.14
CCL1P22362 MTCO2P9-201ENST00000503214 694 ntBASIC1.66□□□□□ -2.14
CCL1P22362 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC1.66□□□□□ -2.14
CCL1P22362 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC1.66□□□□□ -2.14
CCL1P22362 MIR514B-201ENST00000516774 80 ntBASIC1.66□□□□□ -2.14
CCL1P22362 RNA5SP364-201ENST00000516938 78 ntBASIC1.66□□□□□ -2.14
CCL1P22362 RNU6-840P-201ENST00000517275 65 ntBASIC1.66□□□□□ -2.14
CCL1P22362 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC1.66□□□□□ -2.14
CCL1P22362 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC1.66□□□□□ -2.14
CCL1P22362 AL359212.1-201ENST00000556608 614 ntBASIC1.66□□□□□ -2.14
CCL1P22362 AC044913.1-201ENST00000557200 430 ntBASIC1.66□□□□□ -2.14
CCL1P22362 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC1.66□□□□□ -2.14
CCL1P22362 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC1.66□□□□□ -2.14
CCL1P22362 AC136601.2-201ENST00000604356 474 ntBASIC1.66□□□□□ -2.14
CCL1P22362 AP001486.3-201ENST00000615334 372 ntBASIC1.66□□□□□ -2.14
CCL1P22362 AL603758.1-201ENST00000618654 241 ntBASIC1.66□□□□□ -2.14
CCL1P22362 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.66□□□□□ -2.14
CCL1P22362 AC097460.3-201ENST00000623099 442 ntBASIC1.66□□□□□ -2.14
CCL1P22362 AC025048.6-202ENST00000627667 438 ntBASIC1.66□□□□□ -2.14
CCL1P22362 MKKS-204ENST00000639674 192 ntBASIC1.66□□□□□ -2.14
CCL1P22362 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
CCL1P22362 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
CCL1P22362 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.65□□□□□ -2.15
CCL1P22362 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.65□□□□□ -2.15
CCL1P22362 IL33-202ENST00000417746 2327 ntTSL 2 BASIC1.65□□□□□ -2.15
CCL1P22362 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC1.65□□□□□ -2.15
CCL1P22362 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC1.65□□□□□ -2.15
CCL1P22362 AL445529.1-201ENST00000398713 389 ntBASIC1.65□□□□□ -2.15
CCL1P22362 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.65□□□□□ -2.15
CCL1P22362 SNORA3.2-201ENST00000408221 125 ntBASIC1.65□□□□□ -2.15
CCL1P22362 RNA5SP80-201ENST00000410475 111 ntBASIC1.65□□□□□ -2.15
CCL1P22362 RNA5SP270-201ENST00000411361 118 ntBASIC1.65□□□□□ -2.15
CCL1P22362 NDUFS5P4-201ENST00000412983 318 ntBASIC1.65□□□□□ -2.15
CCL1P22362 AL356379.1-201ENST00000414105 126 ntBASIC1.65□□□□□ -2.15
CCL1P22362 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC1.65□□□□□ -2.15
CCL1P22362 Z98742.3-201ENST00000418637 326 ntBASIC1.65□□□□□ -2.15
CCL1P22362 AC027644.1-201ENST00000419595 298 ntBASIC1.65□□□□□ -2.15
CCL1P22362 AC003685.2-201ENST00000422795 395 ntBASIC1.65□□□□□ -2.15
CCL1P22362 HMGN2P38-201ENST00000423806 265 ntBASIC1.65□□□□□ -2.15
CCL1P22362 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC1.65□□□□□ -2.15
CCL1P22362 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC1.65□□□□□ -2.15
CCL1P22362 MTCO3P43-201ENST00000440974 771 ntBASIC1.65□□□□□ -2.15
CCL1P22362 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.65□□□□□ -2.15
CCL1P22362 RNA5SP233-201ENST00000459153 113 ntBASIC1.65□□□□□ -2.15
CCL1P22362 RN7SL274P-201ENST00000492268 272 ntBASIC1.65□□□□□ -2.15
CCL1P22362 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC1.65□□□□□ -2.15
CCL1P22362 AC026801.1-201ENST00000497178 464 ntBASIC1.65□□□□□ -2.15
CCL1P22362 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
CCL1P22362 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC1.65□□□□□ -2.15
CCL1P22362 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC1.65□□□□□ -2.15
CCL1P22362 AL133241.1-201ENST00000556832 487 ntBASIC1.65□□□□□ -2.15
CCL1P22362 AL731537.2-201ENST00000561565 951 ntBASIC1.65□□□□□ -2.15
CCL1P22362 AL049838.1-201ENST00000563647 981 ntBASIC1.65□□□□□ -2.15
CCL1P22362 MIR4448-201ENST00000584360 86 ntBASIC1.65□□□□□ -2.15
CCL1P22362 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC1.65□□□□□ -2.15
CCL1P22362 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC1.65□□□□□ -2.15
CCL1P22362 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC1.65□□□□□ -2.15
CCL1P22362 AC012467.1-201ENST00000607740 256 ntBASIC1.65□□□□□ -2.15
CCL1P22362 AC239868.4-201ENST00000608318 671 ntBASIC1.65□□□□□ -2.15
CCL1P22362 AC069294.1-201ENST00000608397 350 ntBASIC1.65□□□□□ -2.15
CCL1P22362 AL590808.1-201ENST00000618696 141 ntBASIC1.65□□□□□ -2.15
CCL1P22362 AC084824.4-201ENST00000620106 731 ntBASIC1.65□□□□□ -2.15
CCL1P22362 AL157770.1-201ENST00000623049 439 ntBASIC1.65□□□□□ -2.15
CCL1P22362 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC1.65□□□□□ -2.15
CCL1P22362 IGHVIII-44-202ENST00000636235 289 ntBASIC1.65□□□□□ -2.15
CCL1P22362 MIR1322-201ENST00000638013 71 ntBASIC1.65□□□□□ -2.15
CCL1P22362 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC1.65□□□□□ -2.15
CCL1P22362 AC110491.1-201ENST00000562191 2010 ntBASIC1.64□□□□□ -2.15
CCL1P22362 ZNF658B-202ENST00000615961 3375 ntBASIC1.64□□□□□ -2.15
CCL1P22362 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.64□□□□□ -2.15
CCL1P22362 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
CCL1P22362 SNRPEP3-201ENST00000338402 276 ntBASIC1.64□□□□□ -2.15
CCL1P22362 RNU6-28P-201ENST00000362378 107 ntBASIC1.64□□□□□ -2.15
CCL1P22362 RNU6-216P-201ENST00000363282 104 ntBASIC1.64□□□□□ -2.15
CCL1P22362 U6atac.2-201ENST00000408644 118 ntBASIC1.64□□□□□ -2.15
CCL1P22362 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
CCL1P22362 RN7SKP158-201ENST00000410453 326 ntBASIC1.64□□□□□ -2.15
CCL1P22362 BPY2DP-201ENST00000422208 265 ntBASIC1.64□□□□□ -2.15
CCL1P22362 DPH3P2-201ENST00000422618 250 ntBASIC1.64□□□□□ -2.15
CCL1P22362 DPRXP1-201ENST00000426312 460 ntBASIC1.64□□□□□ -2.15
CCL1P22362 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC1.64□□□□□ -2.15
CCL1P22362 UBE2FP3-201ENST00000436366 524 ntBASIC1.64□□□□□ -2.15
CCL1P22362 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
CCL1P22362 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC1.64□□□□□ -2.15
CCL1P22362 OR4G11P-201ENST00000492842 939 ntBASIC1.64□□□□□ -2.15
CCL1P22362 AC114981.1-201ENST00000503897 678 ntBASIC1.64□□□□□ -2.15
CCL1P22362 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC1.64□□□□□ -2.15
CCL1P22362 AC008549.1-201ENST00000512900 643 ntBASIC1.64□□□□□ -2.15
CCL1P22362 NRON-201ENST00000517270 370 ntBASIC1.64□□□□□ -2.15
CCL1P22362 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC1.64□□□□□ -2.15
CCL1P22362 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC1.64□□□□□ -2.15
CCL1P22362 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC1.64□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 7.9 ms