Protein–RNA interactions for Protein: P13611

VCAN, Versican core protein, humanhuman

Predictions only

Length 3,396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCANP13611 XKRYP6-201ENST00000440468 1116 ntBASIC0.79□□□□□ -2.28
VCANP13611 XKRYP3-201ENST00000442113 1116 ntBASIC0.79□□□□□ -2.28
VCANP13611 AL139344.1-201ENST00000605228 195 ntBASIC0.79□□□□□ -2.28
VCANP13611 AL050343.2-201ENST00000607338 280 ntBASIC0.79□□□□□ -2.28
VCANP13611 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC0.79□□□□□ -2.28
VCANP13611 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC0.79□□□□□ -2.28
VCANP13611 Y_RNA.35-201ENST00000362601 101 ntBASIC0.79□□□□□ -2.28
VCANP13611 SSR3-208ENST00000496050 579 ntTSL 4 BASIC0.79□□□□□ -2.28
VCANP13611 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC0.79□□□□□ -2.28
VCANP13611 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC0.79□□□□□ -2.28
VCANP13611 AC068831.7-201ENST00000616954 363 ntBASIC0.79□□□□□ -2.28
VCANP13611 AC006213.5-201ENST00000619673 288 ntBASIC0.79□□□□□ -2.28
VCANP13611 MTND4LP22-201ENST00000508209 276 ntBASIC0.78□□□□□ -2.28
VCANP13611 RN7SKP179-201ENST00000516126 217 ntBASIC0.78□□□□□ -2.28
VCANP13611 AP003327.1-201ENST00000529684 127 ntBASIC0.78□□□□□ -2.28
VCANP13611 AC090617.7-201ENST00000623952 126 ntBASIC0.78□□□□□ -2.28
VCANP13611 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC0.78□□□□□ -2.28
VCANP13611 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC0.78□□□□□ -2.28
VCANP13611 Y_RNA.18-201ENST00000362461 102 ntBASIC0.78□□□□□ -2.28
VCANP13611 SNORA23-201ENST00000365128 182 ntBASIC0.78□□□□□ -2.28
VCANP13611 RNU2-41P-201ENST00000410991 178 ntBASIC0.78□□□□□ -2.28
VCANP13611 AC004022.2-201ENST00000413824 193 ntBASIC0.78□□□□□ -2.28
VCANP13611 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC0.78□□□□□ -2.28
VCANP13611 CYCSP26-201ENST00000534107 320 ntBASIC0.78□□□□□ -2.28
VCANP13611 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC0.77□□□□□ -2.29
VCANP13611 RPS20P20-201ENST00000460498 340 ntBASIC0.77□□□□□ -2.29
VCANP13611 BTF3P12-201ENST00000519620 469 ntBASIC0.77□□□□□ -2.29
VCANP13611 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC0.77□□□□□ -2.29
VCANP13611 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC0.77□□□□□ -2.29
VCANP13611 MIR144-201ENST00000384886 86 ntBASIC0.77□□□□□ -2.29
VCANP13611 MED14P1-201ENST00000430517 648 ntBASIC0.77□□□□□ -2.29
VCANP13611 AL035407.2-201ENST00000454090 378 ntBASIC0.77□□□□□ -2.29
VCANP13611 RPL21P136-201ENST00000605378 396 ntBASIC0.77□□□□□ -2.29
VCANP13611 RNU6-603P-201ENST00000411403 107 ntBASIC0.77□□□□□ -2.29
VCANP13611 RPL37P6-202ENST00000464216 403 ntBASIC0.77□□□□□ -2.29
VCANP13611 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC0.76□□□□□ -2.29
VCANP13611 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC0.76□□□□□ -2.29
VCANP13611 RPL21P93-201ENST00000480465 489 ntBASIC0.76□□□□□ -2.29
VCANP13611 AC233702.1-201ENST00000482905 502 ntBASIC0.76□□□□□ -2.29
VCANP13611 AC093591.1-201ENST00000491435 481 ntBASIC0.76□□□□□ -2.29
VCANP13611 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC0.76□□□□□ -2.29
VCANP13611 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC0.76□□□□□ -2.29
VCANP13611 AL390862.1-201ENST00000635467 1469 ntBASIC0.76□□□□□ -2.29
VCANP13611 MTCO3P46-201ENST00000425787 232 ntBASIC0.76□□□□□ -2.29
VCANP13611 AL357134.1-201ENST00000445848 426 ntBASIC0.76□□□□□ -2.29
VCANP13611 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC0.76□□□□□ -2.29
VCANP13611 TRBVB-201ENST00000477100 408 ntBASIC0.76□□□□□ -2.29
VCANP13611 AC091965.2-201ENST00000512324 613 ntBASIC0.76□□□□□ -2.29
VCANP13611 AC023932.2-201ENST00000603176 175 ntBASIC0.76□□□□□ -2.29
VCANP13611 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC0.76□□□□□ -2.29
VCANP13611 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC0.76□□□□□ -2.29
VCANP13611 OR5H6-203ENST00000642105 978 ntBASIC0.76□□□□□ -2.29
VCANP13611 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC0.76□□□□□ -2.29
VCANP13611 SSXP9-201ENST00000417503 292 ntBASIC0.76□□□□□ -2.29
VCANP13611 PABPC1P3-201ENST00000469174 459 ntBASIC0.76□□□□□ -2.29
VCANP13611 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC0.76□□□□□ -2.29
VCANP13611 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC0.76□□□□□ -2.29
VCANP13611 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC0.75□□□□□ -2.29
VCANP13611 AC107918.3-201ENST00000533272 382 ntBASIC0.75□□□□□ -2.29
VCANP13611 NOP56P3-201ENST00000549457 385 ntBASIC0.75□□□□□ -2.29
VCANP13611 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC0.75□□□□□ -2.29
VCANP13611 AC007785.2-201ENST00000598627 1916 ntBASIC0.75□□□□□ -2.29
VCANP13611 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC0.75□□□□□ -2.29
VCANP13611 AL353706.1-201ENST00000436728 494 ntBASIC0.75□□□□□ -2.29
VCANP13611 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC0.75□□□□□ -2.29
VCANP13611 MIR514B-201ENST00000516774 80 ntBASIC0.75□□□□□ -2.29
VCANP13611 AC100801.1-201ENST00000517368 517 ntTSL 3 BASIC0.75□□□□□ -2.29
VCANP13611 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC0.75□□□□□ -2.29
VCANP13611 Clostridiales-1.3-201ENST00000637703 147 ntBASIC0.75□□□□□ -2.29
VCANP13611 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC0.75□□□□□ -2.29
VCANP13611 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC0.74□□□□□ -2.29
VCANP13611 RNA5SP299-201ENST00000391203 116 ntBASIC0.74□□□□□ -2.29
VCANP13611 Z75741.2-201ENST00000417272 1167 ntBASIC0.74□□□□□ -2.29
VCANP13611 MTCO1P3-201ENST00000429327 192 ntBASIC0.74□□□□□ -2.29
VCANP13611 AP000926.1-201ENST00000479573 241 ntBASIC0.74□□□□□ -2.29
VCANP13611 RNA5SP67-201ENST00000516422 131 ntBASIC0.74□□□□□ -2.29
VCANP13611 AC079148.1-201ENST00000565944 819 ntBASIC0.74□□□□□ -2.29
VCANP13611 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC0.74□□□□□ -2.29
VCANP13611 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC0.74□□□□□ -2.29
VCANP13611 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC0.74□□□□□ -2.29
VCANP13611 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC0.74□□□□□ -2.29
VCANP13611 SNRPGP3-201ENST00000469405 227 ntBASIC0.74□□□□□ -2.29
VCANP13611 AC091435.1-201ENST00000505442 584 ntBASIC0.74□□□□□ -2.29
VCANP13611 RNU4-77P-201ENST00000516692 156 ntBASIC0.74□□□□□ -2.29
VCANP13611 HSPE1P20-201ENST00000538133 289 ntBASIC0.74□□□□□ -2.29
VCANP13611 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC0.74□□□□□ -2.29
VCANP13611 SNORD95.1-201ENST00000364099 68 ntBASIC0.74□□□□□ -2.29
VCANP13611 AC092745.2-202ENST00000411880 369 ntBASIC0.74□□□□□ -2.29
VCANP13611 RNU6-347P-201ENST00000516658 105 ntBASIC0.74□□□□□ -2.29
VCANP13611 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC0.74□□□□□ -2.29
VCANP13611 AC103810.9-201ENST00000606688 112 ntBASIC0.74□□□□□ -2.29
VCANP13611 AC138915.1-201ENST00000565427 1685 ntBASIC0.74□□□□□ -2.29
VCANP13611 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC0.73□□□□□ -2.29
VCANP13611 RAB9AP2-201ENST00000443911 597 ntBASIC0.73□□□□□ -2.29
VCANP13611 AC022431.1-201ENST00000450941 438 ntBASIC0.73□□□□□ -2.29
VCANP13611 Y_RNA.644-201ENST00000459006 113 ntBASIC0.73□□□□□ -2.29
VCANP13611 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC0.73□□□□□ -2.29
VCANP13611 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC0.73□□□□□ -2.29
VCANP13611 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC0.73□□□□□ -2.29
VCANP13611 SNRPGP17-201ENST00000603780 214 ntBASIC0.73□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms