Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 CBX3P7-201ENST00000532876 502 ntBASIC1.35□□□□□ -2.19
CXCL1P09341 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.35□□□□□ -2.19
CXCL1P09341 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
CXCL1P09341 AP002770.2-201ENST00000543613 532 ntBASIC1.35□□□□□ -2.19
CXCL1P09341 NIFKP8-201ENST00000560500 874 ntBASIC1.35□□□□□ -2.19
CXCL1P09341 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC1.35□□□□□ -2.19
CXCL1P09341 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC1.35□□□□□ -2.19
CXCL1P09341 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC1.35□□□□□ -2.19
CXCL1P09341 AL390838.2-201ENST00000602394 274 ntBASIC1.35□□□□□ -2.19
CXCL1P09341 AC136601.2-201ENST00000604356 474 ntBASIC1.35□□□□□ -2.19
CXCL1P09341 AL355297.2-201ENST00000604792 129 ntBASIC1.35□□□□□ -2.19
CXCL1P09341 AC106052.1-201ENST00000608029 497 ntBASIC1.35□□□□□ -2.19
CXCL1P09341 AC013476.2-201ENST00000614456 459 ntBASIC1.35□□□□□ -2.19
CXCL1P09341 AL162233.1-201ENST00000620014 944 ntBASIC1.35□□□□□ -2.19
CXCL1P09341 AC007998.5-201ENST00000622938 237 ntBASIC1.35□□□□□ -2.19
CXCL1P09341 MTND1P37-201ENST00000636562 264 ntBASIC1.35□□□□□ -2.19
CXCL1P09341 MTND5P10-201ENST00000603719 1809 ntBASIC1.35□□□□□ -2.19
CXCL1P09341 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC1.35□□□□□ -2.19
CXCL1P09341 WWP1P1-201ENST00000466609 2769 ntBASIC1.34□□□□□ -2.19
CXCL1P09341 RNU6-884P-201ENST00000363889 107 ntBASIC1.34□□□□□ -2.19
CXCL1P09341 RNU4-42P-201ENST00000364738 142 ntBASIC1.34□□□□□ -2.19
CXCL1P09341 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
CXCL1P09341 AC007742.1-201ENST00000425789 329 ntBASIC1.34□□□□□ -2.19
CXCL1P09341 RAC1P8-201ENST00000427086 527 ntBASIC1.34□□□□□ -2.19
CXCL1P09341 ZYG11AP1-201ENST00000430329 837 ntBASIC1.34□□□□□ -2.19
CXCL1P09341 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC1.34□□□□□ -2.19
CXCL1P09341 ELOCP26-201ENST00000436067 329 ntBASIC1.34□□□□□ -2.19
CXCL1P09341 UBE2D3P1-201ENST00000436669 444 ntBASIC1.34□□□□□ -2.19
CXCL1P09341 AL831737.1-201ENST00000441288 271 ntBASIC1.34□□□□□ -2.19
CXCL1P09341 USP9YP15-201ENST00000442391 422 ntBASIC1.34□□□□□ -2.19
CXCL1P09341 AC007000.2-201ENST00000442564 487 ntBASIC1.34□□□□□ -2.19
CXCL1P09341 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC1.34□□□□□ -2.19
CXCL1P09341 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC1.34□□□□□ -2.19
CXCL1P09341 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC1.34□□□□□ -2.19
CXCL1P09341 AC007182.2-201ENST00000489251 402 ntBASIC1.34□□□□□ -2.19
CXCL1P09341 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC1.34□□□□□ -2.19
CXCL1P09341 RNU6-885P-201ENST00000516607 104 ntBASIC1.34□□□□□ -2.19
CXCL1P09341 HSPE1P18-201ENST00000517602 280 ntBASIC1.34□□□□□ -2.19
CXCL1P09341 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC1.34□□□□□ -2.19
CXCL1P09341 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC1.34□□□□□ -2.19
CXCL1P09341 AL512310.1-201ENST00000548639 172 ntBASIC1.34□□□□□ -2.19
CXCL1P09341 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC1.34□□□□□ -2.19
CXCL1P09341 HSBP1P1-201ENST00000555205 166 ntBASIC1.34□□□□□ -2.19
CXCL1P09341 LINC00933-203ENST00000559812 219 ntBASIC1.34□□□□□ -2.19
CXCL1P09341 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.34□□□□□ -2.19
CXCL1P09341 LARP7P2-201ENST00000575306 125 ntBASIC1.34□□□□□ -2.19
CXCL1P09341 AC068944.2-201ENST00000610373 403 ntBASIC1.34□□□□□ -2.19
CXCL1P09341 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC1.34□□□□□ -2.19
CXCL1P09341 RMST_10.1-201ENST00000616309 154 ntBASIC1.34□□□□□ -2.19
CXCL1P09341 AC080188.3-201ENST00000624842 748 ntBASIC1.34□□□□□ -2.19
CXCL1P09341 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC1.34□□□□□ -2.19
CXCL1P09341 ADAM3A-203ENST00000461344 2157 ntBASIC1.34□□□□□ -2.2
CXCL1P09341 AC110491.1-201ENST00000562191 2010 ntBASIC1.33□□□□□ -2.2
CXCL1P09341 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC1.33□□□□□ -2.2
CXCL1P09341 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
CXCL1P09341 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
CXCL1P09341 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC1.33□□□□□ -2.2
CXCL1P09341 HMGN2P39-201ENST00000398005 273 ntBASIC1.33□□□□□ -2.2
CXCL1P09341 AL356432.1-201ENST00000405809 419 ntBASIC1.33□□□□□ -2.2
CXCL1P09341 RNU2-2P-201ENST00000410396 191 ntBASIC1.33□□□□□ -2.2
CXCL1P09341 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC1.33□□□□□ -2.2
CXCL1P09341 RPS24P7-201ENST00000416921 246 ntBASIC1.33□□□□□ -2.2
CXCL1P09341 AL158823.1-201ENST00000418441 478 ntBASIC1.33□□□□□ -2.2
CXCL1P09341 AC019178.2-201ENST00000423595 505 ntBASIC1.33□□□□□ -2.2
CXCL1P09341 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC1.33□□□□□ -2.2
CXCL1P09341 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC1.33□□□□□ -2.2
CXCL1P09341 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC1.33□□□□□ -2.2
CXCL1P09341 DNAJC19P4-201ENST00000440115 345 ntBASIC1.33□□□□□ -2.2
CXCL1P09341 AC096638.1-201ENST00000444678 216 ntBASIC1.33□□□□□ -2.2
CXCL1P09341 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC1.33□□□□□ -2.2
CXCL1P09341 MTND5P8-201ENST00000449817 1083 ntBASIC1.33□□□□□ -2.2
CXCL1P09341 AC087884.1-201ENST00000469738 328 ntBASIC1.33□□□□□ -2.2
CXCL1P09341 TRBV1-201ENST00000476502 284 ntBASIC1.33□□□□□ -2.2
CXCL1P09341 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
CXCL1P09341 AC108043.1-201ENST00000512696 574 ntBASIC1.33□□□□□ -2.2
CXCL1P09341 AP005639.2-201ENST00000527592 928 ntBASIC1.33□□□□□ -2.2
CXCL1P09341 AP005435.4-201ENST00000529514 284 ntBASIC1.33□□□□□ -2.2
CXCL1P09341 DUXAP1-201ENST00000556632 463 ntBASIC1.33□□□□□ -2.2
CXCL1P09341 AC104229.1-201ENST00000561364 255 ntBASIC1.33□□□□□ -2.2
CXCL1P09341 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC1.33□□□□□ -2.2
CXCL1P09341 BNIP3P24-201ENST00000593398 557 ntBASIC1.33□□□□□ -2.2
CXCL1P09341 AP001429.1-201ENST00000602568 530 ntBASIC1.33□□□□□ -2.2
CXCL1P09341 RPP40P2-201ENST00000603596 712 ntBASIC1.33□□□□□ -2.2
CXCL1P09341 AL121652.1-201ENST00000608851 448 ntBASIC1.33□□□□□ -2.2
CXCL1P09341 U2.15-201ENST00000611544 191 ntBASIC1.33□□□□□ -2.2
CXCL1P09341 MIR6798-201ENST00000612887 67 ntBASIC1.33□□□□□ -2.2
CXCL1P09341 U2.16-201ENST00000613119 191 ntBASIC1.33□□□□□ -2.2
CXCL1P09341 U2.12-201ENST00000613778 191 ntBASIC1.33□□□□□ -2.2
CXCL1P09341 U2.20-201ENST00000613956 192 ntBASIC1.33□□□□□ -2.2
CXCL1P09341 U2.9-201ENST00000615427 191 ntBASIC1.33□□□□□ -2.2
CXCL1P09341 U2.11-201ENST00000616345 191 ntBASIC1.33□□□□□ -2.2
CXCL1P09341 U2.2-201ENST00000616535 191 ntBASIC1.33□□□□□ -2.2
CXCL1P09341 U2.3-201ENST00000617785 191 ntBASIC1.33□□□□□ -2.2
CXCL1P09341 U2.19-201ENST00000618602 191 ntBASIC1.33□□□□□ -2.2
CXCL1P09341 RNU2-1-201ENST00000618664 191 ntBASIC1.33□□□□□ -2.2
CXCL1P09341 U2.6-201ENST00000619225 191 ntBASIC1.33□□□□□ -2.2
CXCL1P09341 U2.5-201ENST00000619465 191 ntBASIC1.33□□□□□ -2.2
CXCL1P09341 U2.10-201ENST00000620268 191 ntBASIC1.33□□□□□ -2.2
CXCL1P09341 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC1.33□□□□□ -2.2
CXCL1P09341 AC132825.7-201ENST00000638744 335 ntBASIC1.33□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 117.5 ms