Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 AC098657.3-201ENST00000620434 263 ntBASIC1.8□□□□□ -2.12
HLA-DQB2P05538 uc_338.20-201ENST00000621563 178 ntBASIC1.8□□□□□ -2.12
HLA-DQB2P05538 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC1.8□□□□□ -2.12
HLA-DQB2P05538 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
HLA-DQB2P05538 AC080128.1-201ENST00000474389 1917 ntBASIC1.79□□□□□ -2.12
HLA-DQB2P05538 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC1.79□□□□□ -2.12
HLA-DQB2P05538 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
HLA-DQB2P05538 U6.112-201ENST00000384129 70 ntBASIC1.79□□□□□ -2.12
HLA-DQB2P05538 RNU6-1140P-201ENST00000410517 106 ntBASIC1.79□□□□□ -2.12
HLA-DQB2P05538 RPL23AP39-201ENST00000415533 405 ntBASIC1.79□□□□□ -2.12
HLA-DQB2P05538 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC1.79□□□□□ -2.12
HLA-DQB2P05538 DEFB130D-201ENST00000426866 237 ntBASIC1.79□□□□□ -2.12
HLA-DQB2P05538 USP12PX-201ENST00000432383 1057 ntBASIC1.79□□□□□ -2.12
HLA-DQB2P05538 AL645568.3-201ENST00000433683 316 ntBASIC1.79□□□□□ -2.12
HLA-DQB2P05538 SEPT14P24-201ENST00000447236 180 ntBASIC1.79□□□□□ -2.12
HLA-DQB2P05538 AP1S2P1-201ENST00000457344 379 ntBASIC1.79□□□□□ -2.12
HLA-DQB2P05538 AC026410.2-201ENST00000460281 156 ntBASIC1.79□□□□□ -2.12
HLA-DQB2P05538 MRPS17P3-201ENST00000465453 385 ntBASIC1.79□□□□□ -2.12
HLA-DQB2P05538 HESX1-202ENST00000473921 757 ntTSL 5 BASIC1.79□□□□□ -2.12
HLA-DQB2P05538 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC1.79□□□□□ -2.12
HLA-DQB2P05538 AC096571.1-202ENST00000506634 735 ntBASIC1.79□□□□□ -2.12
HLA-DQB2P05538 AC022447.3-201ENST00000506865 495 ntBASIC1.79□□□□□ -2.12
HLA-DQB2P05538 AC125611.1-201ENST00000549563 229 ntBASIC1.79□□□□□ -2.12
HLA-DQB2P05538 AC007375.1-201ENST00000554513 578 ntBASIC1.79□□□□□ -2.12
HLA-DQB2P05538 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC1.79□□□□□ -2.12
HLA-DQB2P05538 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC1.79□□□□□ -2.12
HLA-DQB2P05538 AP001429.1-201ENST00000602568 530 ntBASIC1.79□□□□□ -2.12
HLA-DQB2P05538 SNORD14A-201ENST00000606526 91 ntBASIC1.79□□□□□ -2.12
HLA-DQB2P05538 AC084768.2-201ENST00000622736 221 ntBASIC1.79□□□□□ -2.12
HLA-DQB2P05538 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC1.79□□□□□ -2.12
HLA-DQB2P05538 AL109809.4-201ENST00000603520 2185 ntBASIC1.78□□□□□ -2.12
HLA-DQB2P05538 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC1.78□□□□□ -2.12
HLA-DQB2P05538 SNORA3A-201ENST00000364113 130 ntBASIC1.78□□□□□ -2.12
HLA-DQB2P05538 RNU6-220P-201ENST00000390919 107 ntBASIC1.78□□□□□ -2.12
HLA-DQB2P05538 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC1.78□□□□□ -2.12
HLA-DQB2P05538 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC1.78□□□□□ -2.12
HLA-DQB2P05538 RPL7P54-201ENST00000438336 674 ntBASIC1.78□□□□□ -2.12
HLA-DQB2P05538 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC1.78□□□□□ -2.12
HLA-DQB2P05538 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.78□□□□□ -2.12
HLA-DQB2P05538 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC1.78□□□□□ -2.12
HLA-DQB2P05538 RPS15AP17-201ENST00000470598 390 ntBASIC1.78□□□□□ -2.12
HLA-DQB2P05538 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC1.78□□□□□ -2.12
HLA-DQB2P05538 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC1.78□□□□□ -2.12
HLA-DQB2P05538 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC1.78□□□□□ -2.12
HLA-DQB2P05538 RNU5F-8P-201ENST00000515941 111 ntBASIC1.78□□□□□ -2.12
HLA-DQB2P05538 BTF3P12-201ENST00000519620 469 ntBASIC1.78□□□□□ -2.12
HLA-DQB2P05538 AC026616.1-201ENST00000523157 525 ntBASIC1.78□□□□□ -2.12
HLA-DQB2P05538 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC1.78□□□□□ -2.12
HLA-DQB2P05538 ANP32BP3-201ENST00000559213 706 ntBASIC1.78□□□□□ -2.12
HLA-DQB2P05538 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC1.78□□□□□ -2.12
HLA-DQB2P05538 AL161729.4-201ENST00000604650 476 ntBASIC1.78□□□□□ -2.12
HLA-DQB2P05538 AC025594.3-201ENST00000613068 790 ntBASIC1.78□□□□□ -2.12
HLA-DQB2P05538 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC1.78□□□□□ -2.12
HLA-DQB2P05538 AL596245.1-201ENST00000618994 362 ntBASIC1.78□□□□□ -2.12
HLA-DQB2P05538 AC068057.2-201ENST00000624047 895 ntBASIC1.78□□□□□ -2.12
HLA-DQB2P05538 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC1.78□□□□□ -2.12
HLA-DQB2P05538 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
HLA-DQB2P05538 AC010329.5-201ENST00000623497 2174 ntBASIC1.78□□□□□ -2.13
HLA-DQB2P05538 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.77□□□□□ -2.13
HLA-DQB2P05538 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC1.77□□□□□ -2.13
HLA-DQB2P05538 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
HLA-DQB2P05538 SNORD48-201ENST00000364953 64 ntBASIC1.77□□□□□ -2.13
HLA-DQB2P05538 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
HLA-DQB2P05538 RNU6-741P-201ENST00000383889 107 ntBASIC1.77□□□□□ -2.13
HLA-DQB2P05538 RNU6-1300P-201ENST00000391046 108 ntBASIC1.77□□□□□ -2.13
HLA-DQB2P05538 SNORD23.1-201ENST00000408212 104 ntBASIC1.77□□□□□ -2.13
HLA-DQB2P05538 AC023141.4-201ENST00000412031 328 ntBASIC1.77□□□□□ -2.13
HLA-DQB2P05538 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC1.77□□□□□ -2.13
HLA-DQB2P05538 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC1.77□□□□□ -2.13
HLA-DQB2P05538 AC092393.1-201ENST00000439625 742 ntBASIC1.77□□□□□ -2.13
HLA-DQB2P05538 AC010095.1-201ENST00000443543 144 ntBASIC1.77□□□□□ -2.13
HLA-DQB2P05538 TPT1P14-201ENST00000448018 505 ntBASIC1.77□□□□□ -2.13
HLA-DQB2P05538 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC1.77□□□□□ -2.13
HLA-DQB2P05538 snoU13.26-201ENST00000459452 105 ntBASIC1.77□□□□□ -2.13
HLA-DQB2P05538 AC008379.1-201ENST00000463655 464 ntBASIC1.77□□□□□ -2.13
HLA-DQB2P05538 MTCO2P9-201ENST00000503214 694 ntBASIC1.77□□□□□ -2.13
HLA-DQB2P05538 AC112518.2-201ENST00000508565 425 ntBASIC1.77□□□□□ -2.13
HLA-DQB2P05538 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC1.77□□□□□ -2.13
HLA-DQB2P05538 RNU6-295P-201ENST00000516901 104 ntBASIC1.77□□□□□ -2.13
HLA-DQB2P05538 AC023632.1-201ENST00000518463 375 ntBASIC1.77□□□□□ -2.13
HLA-DQB2P05538 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC1.77□□□□□ -2.13
HLA-DQB2P05538 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC1.77□□□□□ -2.13
HLA-DQB2P05538 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC1.77□□□□□ -2.13
HLA-DQB2P05538 AC008498.1-201ENST00000613012 531 ntBASIC1.77□□□□□ -2.13
HLA-DQB2P05538 DDX10P1-201ENST00000448545 1933 ntBASIC1.77□□□□□ -2.13
HLA-DQB2P05538 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC1.77□□□□□ -2.13
HLA-DQB2P05538 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.77□□□□□ -2.13
HLA-DQB2P05538 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC1.77□□□□□ -2.13
HLA-DQB2P05538 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.76□□□□□ -2.13
HLA-DQB2P05538 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC1.76□□□□□ -2.13
HLA-DQB2P05538 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC1.76□□□□□ -2.13
HLA-DQB2P05538 MTND4P27-201ENST00000450813 1354 ntBASIC1.76□□□□□ -2.13
HLA-DQB2P05538 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.76□□□□□ -2.13
HLA-DQB2P05538 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
HLA-DQB2P05538 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.76□□□□□ -2.13
HLA-DQB2P05538 AL109755.1-201ENST00000401791 649 ntBASIC1.76□□□□□ -2.13
HLA-DQB2P05538 RNU6-920P-201ENST00000410926 92 ntBASIC1.76□□□□□ -2.13
HLA-DQB2P05538 AC007560.1-201ENST00000426912 237 ntBASIC1.76□□□□□ -2.13
HLA-DQB2P05538 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC1.76□□□□□ -2.13
HLA-DQB2P05538 ARF4P4-201ENST00000439608 520 ntBASIC1.76□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 85.2 ms