Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 RNU6-377P-201ENST00000515965 102 ntBASIC4.83□□□□□ -1.64
PDGFAP04085 AC209154.1-201ENST00000582156 337 ntBASIC4.83□□□□□ -1.64
PDGFAP04085 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC4.83□□□□□ -1.64
PDGFAP04085 AC011487.3-201ENST00000593607 453 ntBASIC4.83□□□□□ -1.64
PDGFAP04085 AC006077.1-201ENST00000604746 343 ntBASIC4.83□□□□□ -1.64
PDGFAP04085 SDR42E1P4-201ENST00000620894 481 ntBASIC4.83□□□□□ -1.64
PDGFAP04085 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC4.83□□□□□ -1.64
PDGFAP04085 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.83□□□□□ -1.64
PDGFAP04085 Z75746.1-201ENST00000440243 2080 ntBASIC4.83□□□□□ -1.64
PDGFAP04085 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
PDGFAP04085 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC4.83□□□□□ -1.64
PDGFAP04085 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
PDGFAP04085 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC4.83□□□□□ -1.64
PDGFAP04085 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
PDGFAP04085 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
PDGFAP04085 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.82□□□□□ -1.64
PDGFAP04085 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
PDGFAP04085 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.82□□□□□ -1.64
PDGFAP04085 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
PDGFAP04085 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
PDGFAP04085 Y_RNA.27-201ENST00000362540 103 ntBASIC4.82□□□□□ -1.64
PDGFAP04085 RNU6-212P-201ENST00000362642 104 ntBASIC4.82□□□□□ -1.64
PDGFAP04085 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
PDGFAP04085 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC4.82□□□□□ -1.64
PDGFAP04085 RNU6-209P-201ENST00000384118 107 ntBASIC4.82□□□□□ -1.64
PDGFAP04085 Y_RNA.477-201ENST00000384352 108 ntBASIC4.82□□□□□ -1.64
PDGFAP04085 RNU6-166P-201ENST00000384371 107 ntBASIC4.82□□□□□ -1.64
PDGFAP04085 MIR548I3-201ENST00000408378 149 ntBASIC4.82□□□□□ -1.64
PDGFAP04085 MIR548I1-201ENST00000408810 149 ntBASIC4.82□□□□□ -1.64
PDGFAP04085 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC4.82□□□□□ -1.64
PDGFAP04085 AC139712.2-201ENST00000424302 339 ntBASIC4.82□□□□□ -1.64
PDGFAP04085 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC4.82□□□□□ -1.64
PDGFAP04085 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC4.82□□□□□ -1.64
PDGFAP04085 MTND4LP30-201ENST00000454092 297 ntBASIC4.82□□□□□ -1.64
PDGFAP04085 KC877373.1-201ENST00000479066 408 ntBASIC4.82□□□□□ -1.64
PDGFAP04085 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.82□□□□□ -1.64
PDGFAP04085 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC4.82□□□□□ -1.64
PDGFAP04085 SNORA31.8-201ENST00000516327 108 ntBASIC4.82□□□□□ -1.64
PDGFAP04085 RNU6-572P-201ENST00000516724 80 ntBASIC4.82□□□□□ -1.64
PDGFAP04085 RNA5SP165-201ENST00000517142 115 ntBASIC4.82□□□□□ -1.64
PDGFAP04085 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC4.82□□□□□ -1.64
PDGFAP04085 AC005476.1-201ENST00000554427 397 ntBASIC4.82□□□□□ -1.64
PDGFAP04085 AC007375.1-201ENST00000554513 578 ntBASIC4.82□□□□□ -1.64
PDGFAP04085 NDUFB4P11-201ENST00000560510 395 ntBASIC4.82□□□□□ -1.64
PDGFAP04085 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC4.82□□□□□ -1.64
PDGFAP04085 AC053481.4-201ENST00000583164 216 ntBASIC4.82□□□□□ -1.64
PDGFAP04085 RN7SL435P-201ENST00000584418 282 ntBASIC4.82□□□□□ -1.64
PDGFAP04085 MIR7853-201ENST00000584820 132 ntBASIC4.82□□□□□ -1.64
PDGFAP04085 AL355877.2-201ENST00000603670 358 ntBASIC4.82□□□□□ -1.64
PDGFAP04085 CCT7-217ENST00000626868 249 ntTSL 5 BASIC4.82□□□□□ -1.64
PDGFAP04085 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.82□□□□□ -1.64
PDGFAP04085 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
PDGFAP04085 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
PDGFAP04085 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
PDGFAP04085 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
PDGFAP04085 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
PDGFAP04085 AL672167.1-204ENST00000641875 3017 ntBASIC4.82□□□□□ -1.64
PDGFAP04085 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
PDGFAP04085 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC4.82□□□□□ -1.64
PDGFAP04085 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
PDGFAP04085 MFSD8-216ENST00000641147 4009 ntBASIC4.81□□□□□ -1.64
PDGFAP04085 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC4.81□□□□□ -1.64
PDGFAP04085 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
PDGFAP04085 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC4.81□□□□□ -1.64
PDGFAP04085 AC126755.2-208ENST00000327792 462 ntBASIC4.81□□□□□ -1.64
PDGFAP04085 AC138969.1-213ENST00000331436 462 ntBASIC4.81□□□□□ -1.64
PDGFAP04085 RNU6-227P-201ENST00000362865 103 ntBASIC4.81□□□□□ -1.64
PDGFAP04085 U3.6-201ENST00000363622 211 ntBASIC4.81□□□□□ -1.64
PDGFAP04085 U3.13-201ENST00000364804 214 ntBASIC4.81□□□□□ -1.64
PDGFAP04085 RNU5E-7P-201ENST00000365290 117 ntBASIC4.81□□□□□ -1.64
PDGFAP04085 SNORA11-201ENST00000408789 128 ntBASIC4.81□□□□□ -1.64
PDGFAP04085 RNU2-68P-201ENST00000410878 191 ntBASIC4.81□□□□□ -1.64
PDGFAP04085 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.81□□□□□ -1.64
PDGFAP04085 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC4.81□□□□□ -1.64
PDGFAP04085 RPL34P20-201ENST00000442771 351 ntBASIC4.81□□□□□ -1.64
PDGFAP04085 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC4.81□□□□□ -1.64
PDGFAP04085 HIGD1AP2-201ENST00000446367 280 ntBASIC4.81□□□□□ -1.64
PDGFAP04085 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC4.81□□□□□ -1.64
PDGFAP04085 AC079354.2-201ENST00000453523 154 ntBASIC4.81□□□□□ -1.64
PDGFAP04085 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC4.81□□□□□ -1.64
PDGFAP04085 AC092798.1-201ENST00000458542 409 ntBASIC4.81□□□□□ -1.64
PDGFAP04085 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC4.81□□□□□ -1.64
PDGFAP04085 AP000797.2-201ENST00000475768 606 ntBASIC4.81□□□□□ -1.64
PDGFAP04085 AC139453.3-201ENST00000493276 369 ntBASIC4.81□□□□□ -1.64
PDGFAP04085 AC025465.3-201ENST00000510570 311 ntBASIC4.81□□□□□ -1.64
PDGFAP04085 AC074250.1-201ENST00000511117 192 ntBASIC4.81□□□□□ -1.64
PDGFAP04085 MTND1P19-201ENST00000511780 315 ntBASIC4.81□□□□□ -1.64
PDGFAP04085 RAB9BP1-201ENST00000519581 626 ntBASIC4.81□□□□□ -1.64
PDGFAP04085 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
PDGFAP04085 RN7SL356P-201ENST00000582228 248 ntBASIC4.81□□□□□ -1.64
PDGFAP04085 AC005046.1-201ENST00000608515 625 ntBASIC4.81□□□□□ -1.64
PDGFAP04085 MIR7641-1-201ENST00000627518 61 ntBASIC4.81□□□□□ -1.64
PDGFAP04085 PSMD5-AS1-215ENST00000640622 205 ntBASIC4.81□□□□□ -1.64
PDGFAP04085 AC073869.10-201ENST00000642016 354 ntBASIC4.81□□□□□ -1.64
PDGFAP04085 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
PDGFAP04085 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
PDGFAP04085 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
PDGFAP04085 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
PDGFAP04085 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
PDGFAP04085 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms