Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 AC022080.3-201ENST00000544433 482 ntBASIC1.98□□□□□ -2.09
HLA-DQA1P01909 AL391261.3-201ENST00000557194 520 ntBASIC1.98□□□□□ -2.09
HLA-DQA1P01909 MIR4307-201ENST00000582802 84 ntBASIC1.98□□□□□ -2.09
HLA-DQA1P01909 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC1.98□□□□□ -2.09
HLA-DQA1P01909 MIR4635-201ENST00000583759 79 ntBASIC1.98□□□□□ -2.09
HLA-DQA1P01909 MIR4293-201ENST00000584305 78 ntBASIC1.98□□□□□ -2.09
HLA-DQA1P01909 AC091965.4-201ENST00000607691 587 ntBASIC1.98□□□□□ -2.09
HLA-DQA1P01909 AC004908.2-201ENST00000609090 574 ntBASIC1.98□□□□□ -2.09
HLA-DQA1P01909 AL391813.2-201ENST00000609113 322 ntBASIC1.98□□□□□ -2.09
HLA-DQA1P01909 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC1.98□□□□□ -2.09
HLA-DQA1P01909 ATP5A1P2-202ENST00000616464 443 ntBASIC1.98□□□□□ -2.09
HLA-DQA1P01909 HOTTIP_4.1-201ENST00000618195 165 ntBASIC1.98□□□□□ -2.09
HLA-DQA1P01909 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC1.98□□□□□ -2.09
HLA-DQA1P01909 AC068880.5-201ENST00000624331 290 ntBASIC1.98□□□□□ -2.09
HLA-DQA1P01909 AC091965.5-201ENST00000624785 342 ntBASIC1.98□□□□□ -2.09
HLA-DQA1P01909 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC1.98□□□□□ -2.09
HLA-DQA1P01909 PSMD5-AS1-215ENST00000640622 205 ntBASIC1.98□□□□□ -2.09
HLA-DQA1P01909 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC1.98□□□□□ -2.09
HLA-DQA1P01909 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC1.98□□□□□ -2.09
HLA-DQA1P01909 AC073346.2-201ENST00000624724 2058 ntBASIC1.98□□□□□ -2.09
HLA-DQA1P01909 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC1.98□□□□□ -2.09
HLA-DQA1P01909 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC1.98□□□□□ -2.09
HLA-DQA1P01909 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC1.97□□□□□ -2.09
HLA-DQA1P01909 PAPPA-AS1-201ENST00000445861 2450 ntBASIC1.97□□□□□ -2.09
HLA-DQA1P01909 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC1.97□□□□□ -2.09
HLA-DQA1P01909 RNU6-884P-201ENST00000363889 107 ntBASIC1.97□□□□□ -2.09
HLA-DQA1P01909 Y_RNA.333-201ENST00000365274 102 ntBASIC1.97□□□□□ -2.09
HLA-DQA1P01909 RNA5SP354-201ENST00000391247 136 ntBASIC1.97□□□□□ -2.09
HLA-DQA1P01909 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
HLA-DQA1P01909 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC1.97□□□□□ -2.09
HLA-DQA1P01909 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC1.97□□□□□ -2.09
HLA-DQA1P01909 AC244035.1-201ENST00000430042 390 ntBASIC1.97□□□□□ -2.09
HLA-DQA1P01909 GTF2IP20-201ENST00000431663 360 ntBASIC1.97□□□□□ -2.09
HLA-DQA1P01909 UBE2FP3-201ENST00000436366 524 ntBASIC1.97□□□□□ -2.09
HLA-DQA1P01909 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC1.97□□□□□ -2.09
HLA-DQA1P01909 AC005094.1-201ENST00000440420 368 ntBASIC1.97□□□□□ -2.09
HLA-DQA1P01909 AC009296.1-201ENST00000443146 155 ntBASIC1.97□□□□□ -2.09
HLA-DQA1P01909 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC1.97□□□□□ -2.09
HLA-DQA1P01909 ZNF736P8Y-201ENST00000451913 669 ntBASIC1.97□□□□□ -2.09
HLA-DQA1P01909 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC1.97□□□□□ -2.09
HLA-DQA1P01909 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC1.97□□□□□ -2.09
HLA-DQA1P01909 MTCO1P42-201ENST00000457379 726 ntBASIC1.97□□□□□ -2.09
HLA-DQA1P01909 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC1.97□□□□□ -2.09
HLA-DQA1P01909 AC092798.1-201ENST00000458542 409 ntBASIC1.97□□□□□ -2.09
HLA-DQA1P01909 MRPS17P3-201ENST00000465453 385 ntBASIC1.97□□□□□ -2.09
HLA-DQA1P01909 AC107222.1-201ENST00000510899 637 ntBASIC1.97□□□□□ -2.09
HLA-DQA1P01909 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC1.97□□□□□ -2.09
HLA-DQA1P01909 RNA5SP367-201ENST00000516557 118 ntBASIC1.97□□□□□ -2.09
HLA-DQA1P01909 RPPH1-2P-201ENST00000516688 293 ntBASIC1.97□□□□□ -2.09
HLA-DQA1P01909 RNA5SP291-201ENST00000517222 105 ntBASIC1.97□□□□□ -2.09
HLA-DQA1P01909 RN7SKP57-201ENST00000517248 293 ntBASIC1.97□□□□□ -2.09
HLA-DQA1P01909 AC100870.1-201ENST00000522035 505 ntBASIC1.97□□□□□ -2.09
HLA-DQA1P01909 MTCO1P47-201ENST00000523889 1271 ntBASIC1.97□□□□□ -2.09
HLA-DQA1P01909 AP003461.1-201ENST00000528866 78 ntBASIC1.97□□□□□ -2.09
HLA-DQA1P01909 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC1.97□□□□□ -2.09
HLA-DQA1P01909 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC1.97□□□□□ -2.09
HLA-DQA1P01909 AC010546.1-201ENST00000569391 485 ntBASIC1.97□□□□□ -2.09
HLA-DQA1P01909 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC1.97□□□□□ -2.09
HLA-DQA1P01909 AC010620.2-201ENST00000600135 313 ntBASIC1.97□□□□□ -2.09
HLA-DQA1P01909 AC234772.3-201ENST00000602277 528 ntBASIC1.97□□□□□ -2.09
HLA-DQA1P01909 AC068790.3-201ENST00000602988 553 ntBASIC1.97□□□□□ -2.09
HLA-DQA1P01909 AL161734.1-201ENST00000609720 557 ntBASIC1.97□□□□□ -2.09
HLA-DQA1P01909 AC079395.3-201ENST00000615161 484 ntBASIC1.97□□□□□ -2.09
HLA-DQA1P01909 AC140725.3-201ENST00000616193 880 ntBASIC1.97□□□□□ -2.09
HLA-DQA1P01909 UCA1.1-201ENST00000620952 75 ntBASIC1.97□□□□□ -2.09
HLA-DQA1P01909 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC1.97□□□□□ -2.09
HLA-DQA1P01909 AC007490.1-201ENST00000624321 703 ntBASIC1.97□□□□□ -2.09
HLA-DQA1P01909 WARS-244ENST00000627608 123 ntTSL 5 BASIC1.97□□□□□ -2.09
HLA-DQA1P01909 AC092192.1-201ENST00000633154 1018 ntBASIC1.97□□□□□ -2.09
HLA-DQA1P01909 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC1.97□□□□□ -2.09
HLA-DQA1P01909 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC1.97□□□□□ -2.09
HLA-DQA1P01909 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC1.97□□□□□ -2.09
HLA-DQA1P01909 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
HLA-DQA1P01909 Y_RNA.18-201ENST00000362461 102 ntBASIC1.96□□□□□ -2.1
HLA-DQA1P01909 RNU1-140P-201ENST00000365040 165 ntBASIC1.96□□□□□ -2.1
HLA-DQA1P01909 SNORA54-201ENST00000384281 123 ntBASIC1.96□□□□□ -2.1
HLA-DQA1P01909 RNU2-25P-201ENST00000411041 191 ntBASIC1.96□□□□□ -2.1
HLA-DQA1P01909 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC1.96□□□□□ -2.1
HLA-DQA1P01909 AC006946.1-201ENST00000429106 328 ntBASIC1.96□□□□□ -2.1
HLA-DQA1P01909 RPS20P5-201ENST00000434808 360 ntBASIC1.96□□□□□ -2.1
HLA-DQA1P01909 RPS15AP7-201ENST00000439294 405 ntBASIC1.96□□□□□ -2.1
HLA-DQA1P01909 AC093156.1-201ENST00000440382 670 ntBASIC1.96□□□□□ -2.1
HLA-DQA1P01909 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC1.96□□□□□ -2.1
HLA-DQA1P01909 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC1.96□□□□□ -2.1
HLA-DQA1P01909 CECR9-201ENST00000453421 199 ntBASIC1.96□□□□□ -2.1
HLA-DQA1P01909 CACYBPP2-201ENST00000453625 678 ntBASIC1.96□□□□□ -2.1
HLA-DQA1P01909 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC1.96□□□□□ -2.1
HLA-DQA1P01909 AC072039.1-201ENST00000477611 581 ntBASIC1.96□□□□□ -2.1
HLA-DQA1P01909 AL160314.1-201ENST00000490836 438 ntBASIC1.96□□□□□ -2.1
HLA-DQA1P01909 RPL37P25-201ENST00000507308 276 ntBASIC1.96□□□□□ -2.1
HLA-DQA1P01909 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC1.96□□□□□ -2.1
HLA-DQA1P01909 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC1.96□□□□□ -2.1
HLA-DQA1P01909 MTND5P13-201ENST00000513046 1079 ntBASIC1.96□□□□□ -2.1
HLA-DQA1P01909 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC1.96□□□□□ -2.1
HLA-DQA1P01909 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC1.96□□□□□ -2.1
HLA-DQA1P01909 ATP5F1P5-201ENST00000526403 760 ntBASIC1.96□□□□□ -2.1
HLA-DQA1P01909 OR4R1P-201ENST00000529879 463 ntBASIC1.96□□□□□ -2.1
HLA-DQA1P01909 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC1.96□□□□□ -2.1
HLA-DQA1P01909 ELOCP32-201ENST00000548625 324 ntBASIC1.96□□□□□ -2.1
HLA-DQA1P01909 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC1.96□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms