Protein–RNA interactions for Protein: O95786

DDX58, Probable ATP-dependent RNA helicase DDX58, humanhuman

Known RBP Predictions only

Length 925 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX58O95786 HMGB1P14-201ENST00000557424 591 ntBASIC3.6□□□□□ -1.83
DDX58O95786 AL845331.3-202ENST00000562856 261 ntBASIC3.6□□□□□ -1.83
DDX58O95786 HMGB1P6-201ENST00000569046 646 ntBASIC3.6□□□□□ -1.83
DDX58O95786 MTCO3P24-201ENST00000572729 782 ntBASIC3.6□□□□□ -1.83
DDX58O95786 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.6□□□□□ -1.83
DDX58O95786 MIR548AB-201ENST00000584917 84 ntBASIC3.6□□□□□ -1.83
DDX58O95786 AL590229.1-201ENST00000603497 542 ntBASIC3.6□□□□□ -1.83
DDX58O95786 AC099778.2-201ENST00000610904 211 ntBASIC3.6□□□□□ -1.83
DDX58O95786 AC245517.5-201ENST00000611529 162 ntBASIC3.6□□□□□ -1.83
DDX58O95786 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.6□□□□□ -1.83
DDX58O95786 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.59□□□□□ -1.83
DDX58O95786 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
DDX58O95786 SNORA14A-201ENST00000364773 135 ntBASIC3.59□□□□□ -1.83
DDX58O95786 RPL21P3-201ENST00000395517 478 ntBASIC3.59□□□□□ -1.83
DDX58O95786 RNU2-62P-201ENST00000410868 191 ntBASIC3.59□□□□□ -1.83
DDX58O95786 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.59□□□□□ -1.83
DDX58O95786 NPM1P11-201ENST00000417106 855 ntBASIC3.59□□□□□ -1.83
DDX58O95786 BTF3L4P3-201ENST00000418879 476 ntBASIC3.59□□□□□ -1.83
DDX58O95786 B3GALNT1P1-201ENST00000420569 975 ntBASIC3.59□□□□□ -1.83
DDX58O95786 AL451054.2-201ENST00000420896 202 ntBASIC3.59□□□□□ -1.83
DDX58O95786 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC3.59□□□□□ -1.83
DDX58O95786 TIMM9P1-201ENST00000436122 256 ntBASIC3.59□□□□□ -1.83
DDX58O95786 AL049734.2-201ENST00000441066 616 ntBASIC3.59□□□□□ -1.83
DDX58O95786 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC3.59□□□□□ -1.83
DDX58O95786 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC3.59□□□□□ -1.83
DDX58O95786 snoU13.28-201ENST00000459235 104 ntBASIC3.59□□□□□ -1.83
DDX58O95786 AC146507.2-201ENST00000460608 476 ntBASIC3.59□□□□□ -1.83
DDX58O95786 MTND4LP3-201ENST00000468320 276 ntBASIC3.59□□□□□ -1.83
DDX58O95786 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC3.59□□□□□ -1.83
DDX58O95786 AC114797.1-201ENST00000514003 728 ntBASIC3.59□□□□□ -1.83
DDX58O95786 RNU6-928P-201ENST00000516876 104 ntBASIC3.59□□□□□ -1.83
DDX58O95786 AC123904.2-201ENST00000548059 300 ntBASIC3.59□□□□□ -1.83
DDX58O95786 ZNF519P3-201ENST00000557158 1032 ntBASIC3.59□□□□□ -1.83
DDX58O95786 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC3.59□□□□□ -1.83
DDX58O95786 AC073114.1-201ENST00000612027 490 ntBASIC3.59□□□□□ -1.83
DDX58O95786 AL161629.2-201ENST00000615347 275 ntBASIC3.59□□□□□ -1.83
DDX58O95786 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC3.59□□□□□ -1.83
DDX58O95786 AC009159.1-201ENST00000618386 642 ntBASIC3.59□□□□□ -1.83
DDX58O95786 AL136313.1-201ENST00000624804 202 ntBASIC3.59□□□□□ -1.83
DDX58O95786 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
DDX58O95786 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC3.59□□□□□ -1.83
DDX58O95786 CU459211.1-201ENST00000635667 749 ntBASIC3.59□□□□□ -1.83
DDX58O95786 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC3.59□□□□□ -1.84
DDX58O95786 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.59□□□□□ -1.84
DDX58O95786 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
DDX58O95786 MIR148B-201ENST00000362252 99 ntBASIC3.58□□□□□ -1.84
DDX58O95786 RNU1-35P-201ENST00000362782 153 ntBASIC3.58□□□□□ -1.84
DDX58O95786 MIR512-1-201ENST00000384913 84 ntBASIC3.58□□□□□ -1.84
DDX58O95786 FCF1P10-201ENST00000407590 479 ntBASIC3.58□□□□□ -1.84
DDX58O95786 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC3.58□□□□□ -1.84
DDX58O95786 AC012498.1-201ENST00000424037 437 ntBASIC3.58□□□□□ -1.84
DDX58O95786 AL356583.2-201ENST00000426536 280 ntBASIC3.58□□□□□ -1.84
DDX58O95786 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.58□□□□□ -1.84
DDX58O95786 TRIM60P18-201ENST00000441518 828 ntBASIC3.58□□□□□ -1.84
DDX58O95786 AC010099.1-201ENST00000455434 375 ntBASIC3.58□□□□□ -1.84
DDX58O95786 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.58□□□□□ -1.84
DDX58O95786 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC3.58□□□□□ -1.84
DDX58O95786 RPL21P8-201ENST00000465083 535 ntBASIC3.58□□□□□ -1.84
DDX58O95786 KC877373.1-201ENST00000479066 408 ntBASIC3.58□□□□□ -1.84
DDX58O95786 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC3.58□□□□□ -1.84
DDX58O95786 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.58□□□□□ -1.84
DDX58O95786 MTND5P13-201ENST00000513046 1079 ntBASIC3.58□□□□□ -1.84
DDX58O95786 AC010265.1-201ENST00000513509 211 ntBASIC3.58□□□□□ -1.84
DDX58O95786 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC3.58□□□□□ -1.84
DDX58O95786 RN7SKP132-201ENST00000516001 208 ntBASIC3.58□□□□□ -1.84
DDX58O95786 RNU6-201P-201ENST00000517100 61 ntBASIC3.58□□□□□ -1.84
DDX58O95786 HPRT1P3-201ENST00000539521 576 ntBASIC3.58□□□□□ -1.84
DDX58O95786 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC3.58□□□□□ -1.84
DDX58O95786 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.58□□□□□ -1.84
DDX58O95786 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.58□□□□□ -1.84
DDX58O95786 AC012065.4-201ENST00000602445 679 ntBASIC3.58□□□□□ -1.84
DDX58O95786 AL359999.1-201ENST00000604513 294 ntBASIC3.58□□□□□ -1.84
DDX58O95786 ATP1B3P1-201ENST00000605365 821 ntBASIC3.58□□□□□ -1.84
DDX58O95786 AC004696.1-201ENST00000614345 607 ntBASIC3.58□□□□□ -1.84
DDX58O95786 AC010338.1-201ENST00000621823 717 ntBASIC3.58□□□□□ -1.84
DDX58O95786 AC068057.2-201ENST00000624047 895 ntBASIC3.58□□□□□ -1.84
DDX58O95786 AC025048.6-202ENST00000627667 438 ntBASIC3.58□□□□□ -1.84
DDX58O95786 SNORA50A-202ENST00000629536 136 ntBASIC3.58□□□□□ -1.84
DDX58O95786 MTND4P4-201ENST00000439033 1366 ntBASIC3.58□□□□□ -1.84
DDX58O95786 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
DDX58O95786 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
DDX58O95786 SNORD116-2-201ENST00000384274 95 ntBASIC3.57□□□□□ -1.84
DDX58O95786 SNORD116-6-201ENST00000384711 96 ntBASIC3.57□□□□□ -1.84
DDX58O95786 Z85995.1-201ENST00000415547 335 ntBASIC3.57□□□□□ -1.84
DDX58O95786 CYCSP46-201ENST00000423569 204 ntBASIC3.57□□□□□ -1.84
DDX58O95786 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC3.57□□□□□ -1.84
DDX58O95786 Z82210.1-201ENST00000440037 231 ntBASIC3.57□□□□□ -1.84
DDX58O95786 AC005094.1-201ENST00000440420 368 ntBASIC3.57□□□□□ -1.84
DDX58O95786 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC3.57□□□□□ -1.84
DDX58O95786 ELL2P3-201ENST00000457883 1602 ntBASIC3.57□□□□□ -1.84
DDX58O95786 RN7SL75P-201ENST00000461926 281 ntBASIC3.57□□□□□ -1.84
DDX58O95786 UBE2DNL-203ENST00000474922 222 ntBASIC3.57□□□□□ -1.84
DDX58O95786 LARP1BP2-201ENST00000486594 519 ntBASIC3.57□□□□□ -1.84
DDX58O95786 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC3.57□□□□□ -1.84
DDX58O95786 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.57□□□□□ -1.84
DDX58O95786 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC3.57□□□□□ -1.84
DDX58O95786 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
DDX58O95786 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
DDX58O95786 TRAV28-201ENST00000557548 323 ntBASIC3.57□□□□□ -1.84
DDX58O95786 MIR3146-201ENST00000580367 79 ntBASIC3.57□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms