Protein–RNA interactions for Protein: O95104

SCAF4, Splicing factor, arginine/serine-rich 15, humanhuman

Known RBP Predictions only

Length 1,147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4O95104 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
SCAF4O95104 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.8□□□□□ -1.8
SCAF4O95104 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
SCAF4O95104 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.8□□□□□ -1.8
SCAF4O95104 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
SCAF4O95104 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
SCAF4O95104 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC3.8□□□□□ -1.8
SCAF4O95104 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC3.8□□□□□ -1.8
SCAF4O95104 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC3.8□□□□□ -1.8
SCAF4O95104 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
SCAF4O95104 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC3.8□□□□□ -1.8
SCAF4O95104 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
SCAF4O95104 RNA5SP428-201ENST00000365129 132 ntBASIC3.8□□□□□ -1.8
SCAF4O95104 RHOT1P2-201ENST00000366423 333 ntBASIC3.8□□□□□ -1.8
SCAF4O95104 Y_RNA.452-201ENST00000384202 108 ntBASIC3.8□□□□□ -1.8
SCAF4O95104 MIR93-201ENST00000385024 80 ntBASIC3.8□□□□□ -1.8
SCAF4O95104 AL645927.1-201ENST00000396783 406 ntBASIC3.8□□□□□ -1.8
SCAF4O95104 HMGB3P2-201ENST00000411913 584 ntBASIC3.8□□□□□ -1.8
SCAF4O95104 AC114755.2-201ENST00000413520 361 ntBASIC3.8□□□□□ -1.8
SCAF4O95104 AL160275.3-201ENST00000423876 471 ntBASIC3.8□□□□□ -1.8
SCAF4O95104 NRBF2P3-201ENST00000432731 865 ntBASIC3.8□□□□□ -1.8
SCAF4O95104 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.8□□□□□ -1.8
SCAF4O95104 SNRPGP3-201ENST00000469405 227 ntBASIC3.8□□□□□ -1.8
SCAF4O95104 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.8□□□□□ -1.8
SCAF4O95104 RN7SL319P-201ENST00000480656 221 ntBASIC3.8□□□□□ -1.8
SCAF4O95104 AC104136.1-201ENST00000512969 394 ntBASIC3.8□□□□□ -1.8
SCAF4O95104 RNU6-677P-201ENST00000516914 101 ntBASIC3.8□□□□□ -1.8
SCAF4O95104 CYCSP27-201ENST00000527643 293 ntBASIC3.8□□□□□ -1.8
SCAF4O95104 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
SCAF4O95104 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.8□□□□□ -1.8
SCAF4O95104 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC3.8□□□□□ -1.8
SCAF4O95104 FKBP1BP1-201ENST00000553366 325 ntBASIC3.8□□□□□ -1.8
SCAF4O95104 AC015912.2-201ENST00000571053 181 ntBASIC3.8□□□□□ -1.8
SCAF4O95104 AC209154.1-201ENST00000582156 337 ntBASIC3.8□□□□□ -1.8
SCAF4O95104 MIR4691-201ENST00000583764 85 ntBASIC3.8□□□□□ -1.8
SCAF4O95104 MIR3149-201ENST00000584629 83 ntBASIC3.8□□□□□ -1.8
SCAF4O95104 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC3.8□□□□□ -1.8
SCAF4O95104 AC012119.1-201ENST00000603184 222 ntBASIC3.8□□□□□ -1.8
SCAF4O95104 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
SCAF4O95104 AC005014.2-201ENST00000607795 599 ntBASIC3.8□□□□□ -1.8
SCAF4O95104 MIR7155-201ENST00000615925 56 ntBASIC3.8□□□□□ -1.8
SCAF4O95104 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
SCAF4O95104 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC3.8□□□□□ -1.8
SCAF4O95104 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
SCAF4O95104 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC3.8□□□□□ -1.8
SCAF4O95104 AC010733.2-201ENST00000589496 5702 ntBASIC3.8□□□□□ -1.8
SCAF4O95104 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
SCAF4O95104 AC116096.1-201ENST00000566804 2314 ntBASIC3.79□□□□□ -1.8
SCAF4O95104 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
SCAF4O95104 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
SCAF4O95104 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
SCAF4O95104 AC125257.1-201ENST00000560400 2930 ntBASIC3.79□□□□□ -1.8
SCAF4O95104 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
SCAF4O95104 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
SCAF4O95104 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC3.79□□□□□ -1.8
SCAF4O95104 Y_RNA.193-201ENST00000363979 102 ntBASIC3.79□□□□□ -1.8
SCAF4O95104 RNU6-371P-201ENST00000364283 108 ntBASIC3.79□□□□□ -1.8
SCAF4O95104 RNU6-1303P-201ENST00000364841 107 ntBASIC3.79□□□□□ -1.8
SCAF4O95104 MIR607-201ENST00000385241 96 ntBASIC3.79□□□□□ -1.8
SCAF4O95104 RNU4-6P-201ENST00000410804 122 ntBASIC3.79□□□□□ -1.8
SCAF4O95104 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.79□□□□□ -1.8
SCAF4O95104 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC3.79□□□□□ -1.8
SCAF4O95104 TBCAP2-201ENST00000416175 326 ntBASIC3.79□□□□□ -1.8
SCAF4O95104 AC119751.6-201ENST00000416712 186 ntBASIC3.79□□□□□ -1.8
SCAF4O95104 AC108059.2-201ENST00000434626 151 ntBASIC3.79□□□□□ -1.8
SCAF4O95104 RHOT1P3-201ENST00000436571 331 ntBASIC3.79□□□□□ -1.8
SCAF4O95104 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC3.79□□□□□ -1.8
SCAF4O95104 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC3.79□□□□□ -1.8
SCAF4O95104 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3.79□□□□□ -1.8
SCAF4O95104 RPL12P25-201ENST00000455592 494 ntBASIC3.79□□□□□ -1.8
SCAF4O95104 BTF3P15-201ENST00000455606 336 ntBASIC3.79□□□□□ -1.8
SCAF4O95104 RPL31P13-201ENST00000484151 370 ntBASIC3.79□□□□□ -1.8
SCAF4O95104 AC007686.1-201ENST00000488511 463 ntBASIC3.79□□□□□ -1.8
SCAF4O95104 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC3.79□□□□□ -1.8
SCAF4O95104 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC3.79□□□□□ -1.8
SCAF4O95104 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC3.79□□□□□ -1.8
SCAF4O95104 SNORA25.10-201ENST00000515926 124 ntBASIC3.79□□□□□ -1.8
SCAF4O95104 RNU6-764P-201ENST00000516396 105 ntBASIC3.79□□□□□ -1.8
SCAF4O95104 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC3.79□□□□□ -1.8
SCAF4O95104 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
SCAF4O95104 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC3.79□□□□□ -1.8
SCAF4O95104 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC3.79□□□□□ -1.8
SCAF4O95104 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC3.79□□□□□ -1.8
SCAF4O95104 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
SCAF4O95104 AC005951.2-201ENST00000576282 495 ntBASIC3.79□□□□□ -1.8
SCAF4O95104 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC3.79□□□□□ -1.8
SCAF4O95104 AL139395.1-201ENST00000603662 160 ntBASIC3.79□□□□□ -1.8
SCAF4O95104 AC011890.2-201ENST00000613393 294 ntBASIC3.79□□□□□ -1.8
SCAF4O95104 SDR42E1P2-201ENST00000614861 481 ntBASIC3.79□□□□□ -1.8
SCAF4O95104 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC3.79□□□□□ -1.8
SCAF4O95104 AC103858.2-201ENST00000621471 543 ntBASIC3.79□□□□□ -1.8
SCAF4O95104 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
SCAF4O95104 AC091905.4-201ENST00000623432 202 ntBASIC3.79□□□□□ -1.8
SCAF4O95104 AC048347.1-201ENST00000624621 427 ntBASIC3.79□□□□□ -1.8
SCAF4O95104 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
SCAF4O95104 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC3.79□□□□□ -1.8
SCAF4O95104 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
SCAF4O95104 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC3.79□□□□□ -1.8
SCAF4O95104 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC3.79□□□□□ -1.8
SCAF4O95104 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 113.4 ms