Protein–RNA interactions for Protein: O60902

SHOX2, Short stature homeobox protein 2, humanhuman

Predicted RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2O60902 RNA5SP200-201ENST00000516360 103 ntBASIC2.13□□□□□ -2.07
SHOX2O60902 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC2.13□□□□□ -2.07
SHOX2O60902 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC2.13□□□□□ -2.07
SHOX2O60902 OR8K2P-201ENST00000524645 927 ntBASIC2.13□□□□□ -2.07
SHOX2O60902 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.13□□□□□ -2.07
SHOX2O60902 AP001646.1-201ENST00000527936 915 ntBASIC2.13□□□□□ -2.07
SHOX2O60902 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.13□□□□□ -2.07
SHOX2O60902 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
SHOX2O60902 AL138976.2-201ENST00000563989 694 ntBASIC2.13□□□□□ -2.07
SHOX2O60902 AC090615.1-201ENST00000577519 154 ntBASIC2.13□□□□□ -2.07
SHOX2O60902 MIR4648-201ENST00000580107 72 ntBASIC2.13□□□□□ -2.07
SHOX2O60902 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
SHOX2O60902 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.13□□□□□ -2.07
SHOX2O60902 AP001429.1-201ENST00000602568 530 ntBASIC2.13□□□□□ -2.07
SHOX2O60902 AL449363.1-201ENST00000617815 186 ntBASIC2.13□□□□□ -2.07
SHOX2O60902 AC091948.2-201ENST00000636510 279 ntBASIC2.13□□□□□ -2.07
SHOX2O60902 AL356473.1-201ENST00000406203 1408 ntBASIC2.13□□□□□ -2.07
SHOX2O60902 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.13□□□□□ -2.07
SHOX2O60902 AL359851.1-201ENST00000569460 4997 ntBASIC2.12□□□□□ -2.07
SHOX2O60902 RNU5B-1-201ENST00000363286 116 ntBASIC2.12□□□□□ -2.07
SHOX2O60902 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC2.12□□□□□ -2.07
SHOX2O60902 HMGB1P49-201ENST00000418882 569 ntBASIC2.12□□□□□ -2.07
SHOX2O60902 AC092047.1-201ENST00000424997 240 ntBASIC2.12□□□□□ -2.07
SHOX2O60902 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.12□□□□□ -2.07
SHOX2O60902 SDCBPP1-201ENST00000440192 890 ntBASIC2.12□□□□□ -2.07
SHOX2O60902 BNIP3P2-201ENST00000441221 577 ntBASIC2.12□□□□□ -2.07
SHOX2O60902 USP9YP8-201ENST00000441913 500 ntBASIC2.12□□□□□ -2.07
SHOX2O60902 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC2.12□□□□□ -2.07
SHOX2O60902 RPS3P1-201ENST00000456781 192 ntBASIC2.12□□□□□ -2.07
SHOX2O60902 AP1S2P1-201ENST00000457344 379 ntBASIC2.12□□□□□ -2.07
SHOX2O60902 RNU7-26P-201ENST00000458980 63 ntBASIC2.12□□□□□ -2.07
SHOX2O60902 OR4G11P-201ENST00000492842 939 ntBASIC2.12□□□□□ -2.07
SHOX2O60902 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
SHOX2O60902 AC138853.1-201ENST00000503549 823 ntBASIC2.12□□□□□ -2.07
SHOX2O60902 AC026414.1-201ENST00000504046 698 ntBASIC2.12□□□□□ -2.07
SHOX2O60902 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC2.12□□□□□ -2.07
SHOX2O60902 AC234781.5-201ENST00000508429 271 ntBASIC2.12□□□□□ -2.07
SHOX2O60902 AC006499.2-201ENST00000513470 337 ntBASIC2.12□□□□□ -2.07
SHOX2O60902 RNA5SP291-201ENST00000517222 105 ntBASIC2.12□□□□□ -2.07
SHOX2O60902 RPL7P20-201ENST00000520308 745 ntBASIC2.12□□□□□ -2.07
SHOX2O60902 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC2.12□□□□□ -2.07
SHOX2O60902 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC2.12□□□□□ -2.07
SHOX2O60902 AC087465.1-201ENST00000560574 245 ntBASIC2.12□□□□□ -2.07
SHOX2O60902 AL049838.1-201ENST00000563647 981 ntBASIC2.12□□□□□ -2.07
SHOX2O60902 AC023824.2-201ENST00000566185 400 ntBASIC2.12□□□□□ -2.07
SHOX2O60902 AC138915.2-201ENST00000569776 97 ntBASIC2.12□□□□□ -2.07
SHOX2O60902 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC2.12□□□□□ -2.07
SHOX2O60902 AL356280.1-201ENST00000603614 379 ntBASIC2.12□□□□□ -2.07
SHOX2O60902 AP000942.3-201ENST00000603702 160 ntBASIC2.12□□□□□ -2.07
SHOX2O60902 AC011451.2-201ENST00000604303 598 ntBASIC2.12□□□□□ -2.07
SHOX2O60902 HMGB1P24-202ENST00000615653 685 ntBASIC2.12□□□□□ -2.07
SHOX2O60902 AC078880.5-201ENST00000617845 421 ntBASIC2.12□□□□□ -2.07
SHOX2O60902 AC010975.3-201ENST00000618727 978 ntBASIC2.12□□□□□ -2.07
SHOX2O60902 CU459211.1-201ENST00000635667 749 ntBASIC2.12□□□□□ -2.07
SHOX2O60902 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC2.12□□□□□ -2.07
SHOX2O60902 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
SHOX2O60902 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.12□□□□□ -2.07
SHOX2O60902 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
SHOX2O60902 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.12□□□□□ -2.07
SHOX2O60902 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
SHOX2O60902 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.11□□□□□ -2.07
SHOX2O60902 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
SHOX2O60902 AC009902.3-201ENST00000606235 2172 ntBASIC2.11□□□□□ -2.07
SHOX2O60902 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
SHOX2O60902 MIR337-201ENST00000362281 93 ntBASIC2.11□□□□□ -2.07
SHOX2O60902 RNU6-216P-201ENST00000363282 104 ntBASIC2.11□□□□□ -2.07
SHOX2O60902 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
SHOX2O60902 RNU6-217P-201ENST00000384164 104 ntBASIC2.11□□□□□ -2.07
SHOX2O60902 RPL22P22-201ENST00000395439 379 ntBASIC2.11□□□□□ -2.07
SHOX2O60902 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.11□□□□□ -2.07
SHOX2O60902 RNA5SP425-201ENST00000410336 112 ntBASIC2.11□□□□□ -2.07
SHOX2O60902 AL135786.1-201ENST00000415892 214 ntBASIC2.11□□□□□ -2.07
SHOX2O60902 AC009963.1-201ENST00000417265 157 ntBASIC2.11□□□□□ -2.07
SHOX2O60902 SEPT2P1-201ENST00000419651 180 ntBASIC2.11□□□□□ -2.07
SHOX2O60902 HMGN2P3-201ENST00000433603 273 ntBASIC2.11□□□□□ -2.07
SHOX2O60902 Z80107.1-201ENST00000436830 412 ntBASIC2.11□□□□□ -2.07
SHOX2O60902 HMGN2P5-201ENST00000436882 273 ntBASIC2.11□□□□□ -2.07
SHOX2O60902 DDX3P2-201ENST00000446138 111 ntBASIC2.11□□□□□ -2.07
SHOX2O60902 AC107626.1-201ENST00000471084 183 ntBASIC2.11□□□□□ -2.07
SHOX2O60902 SUMO2P6-201ENST00000505273 288 ntBASIC2.11□□□□□ -2.07
SHOX2O60902 AC092436.1-201ENST00000506450 503 ntBASIC2.11□□□□□ -2.07
SHOX2O60902 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC2.11□□□□□ -2.07
SHOX2O60902 SCARNA11.3-201ENST00000517276 130 ntBASIC2.11□□□□□ -2.07
SHOX2O60902 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.11□□□□□ -2.07
SHOX2O60902 AC022861.1-201ENST00000522981 663 ntBASIC2.11□□□□□ -2.07
SHOX2O60902 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC2.11□□□□□ -2.07
SHOX2O60902 AL132857.1-201ENST00000555180 708 ntBASIC2.11□□□□□ -2.07
SHOX2O60902 AL391261.3-201ENST00000557194 520 ntBASIC2.11□□□□□ -2.07
SHOX2O60902 AC234778.2-201ENST00000566241 354 ntBASIC2.11□□□□□ -2.07
SHOX2O60902 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC2.11□□□□□ -2.07
SHOX2O60902 AC009977.1-201ENST00000586015 570 ntBASIC2.11□□□□□ -2.07
SHOX2O60902 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.11□□□□□ -2.07
SHOX2O60902 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC2.11□□□□□ -2.07
SHOX2O60902 AC008443.7-201ENST00000622195 246 ntBASIC2.11□□□□□ -2.07
SHOX2O60902 AL031601.2-202ENST00000622650 282 ntBASIC2.11□□□□□ -2.07
SHOX2O60902 MIR1322-201ENST00000638013 71 ntBASIC2.11□□□□□ -2.07
SHOX2O60902 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
SHOX2O60902 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
SHOX2O60902 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC2.1□□□□□ -2.07
SHOX2O60902 SNRPEP3-201ENST00000338402 276 ntBASIC2.1□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms