Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC5.34□□□□□ -1.55
GFRA3O60609 PRELID2P1-201ENST00000552837 301 ntBASIC5.34□□□□□ -1.55
GFRA3O60609 TRAV37-201ENST00000553906 342 ntBASIC5.34□□□□□ -1.55
GFRA3O60609 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC5.34□□□□□ -1.55
GFRA3O60609 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
GFRA3O60609 FAM71BP1-201ENST00000604431 523 ntBASIC5.34□□□□□ -1.55
GFRA3O60609 AC099669.2-201ENST00000616549 437 ntBASIC5.34□□□□□ -1.55
GFRA3O60609 TCL6_3.1-201ENST00000619064 137 ntBASIC5.34□□□□□ -1.55
GFRA3O60609 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
GFRA3O60609 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
GFRA3O60609 RRN3-202ENST00000327307 2039 ntTSL 2 BASIC5.34□□□□□ -1.55
GFRA3O60609 ZMYND11-202ENST00000381584 2709 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
GFRA3O60609 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
GFRA3O60609 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
GFRA3O60609 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
GFRA3O60609 LINC00907-201ENST00000585627 3324 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
GFRA3O60609 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
GFRA3O60609 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
GFRA3O60609 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
GFRA3O60609 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC5.34□□□□□ -1.56
GFRA3O60609 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC5.34□□□□□ -1.56
GFRA3O60609 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC5.34□□□□□ -1.56
GFRA3O60609 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.56
GFRA3O60609 ZNF528-203ENST00000391788 4209 ntTSL 2 BASIC5.34□□□□□ -1.56
GFRA3O60609 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.56
GFRA3O60609 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
GFRA3O60609 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC5.33□□□□□ -1.56
GFRA3O60609 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
GFRA3O60609 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
GFRA3O60609 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
GFRA3O60609 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
GFRA3O60609 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC5.33□□□□□ -1.56
GFRA3O60609 AC006600.2-201ENST00000624834 2506 ntBASIC5.33□□□□□ -1.56
GFRA3O60609 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
GFRA3O60609 DMD-222ENST00000474231 5209 ntTSL 5 BASIC5.33□□□□□ -1.56
GFRA3O60609 ENPP3-203ENST00000414305 3418 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
GFRA3O60609 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
GFRA3O60609 Y_RNA.24-201ENST00000362508 103 ntBASIC5.33□□□□□ -1.56
GFRA3O60609 U8.1-201ENST00000362843 134 ntBASIC5.33□□□□□ -1.56
GFRA3O60609 Y_RNA.101-201ENST00000363154 102 ntBASIC5.33□□□□□ -1.56
GFRA3O60609 MIR32-201ENST00000384965 70 ntBASIC5.33□□□□□ -1.56
GFRA3O60609 MIR10B-201ENST00000385011 110 ntBASIC5.33□□□□□ -1.56
GFRA3O60609 AL512604.1-201ENST00000404812 257 ntBASIC5.33□□□□□ -1.56
GFRA3O60609 AC069218.2-201ENST00000411665 344 ntBASIC5.33□□□□□ -1.56
GFRA3O60609 AL359073.1-201ENST00000448036 403 ntBASIC5.33□□□□□ -1.56
GFRA3O60609 AC010733.1-201ENST00000451515 401 ntBASIC5.33□□□□□ -1.56
GFRA3O60609 SUMO2P6-201ENST00000505273 288 ntBASIC5.33□□□□□ -1.56
GFRA3O60609 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC5.33□□□□□ -1.56
GFRA3O60609 AC007494.1-201ENST00000562293 760 ntBASIC5.33□□□□□ -1.56
GFRA3O60609 UBL5P4-201ENST00000562584 236 ntBASIC5.33□□□□□ -1.56
GFRA3O60609 MIR4311-201ENST00000580794 100 ntBASIC5.33□□□□□ -1.56
GFRA3O60609 MIR3667-201ENST00000581025 74 ntBASIC5.33□□□□□ -1.56
GFRA3O60609 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC5.33□□□□□ -1.56
GFRA3O60609 AL078604.3-201ENST00000615580 211 ntBASIC5.33□□□□□ -1.56
GFRA3O60609 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
GFRA3O60609 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
GFRA3O60609 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
GFRA3O60609 NSF-206ENST00000575068 2667 ntTSL 2 BASIC5.33□□□□□ -1.56
GFRA3O60609 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
GFRA3O60609 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
GFRA3O60609 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
GFRA3O60609 PWAR1-201ENST00000624188 2414 ntBASIC5.33□□□□□ -1.56
GFRA3O60609 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
GFRA3O60609 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC5.32□□□□□ -1.56
GFRA3O60609 ZBTB21-205ENST00000398511 5608 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
GFRA3O60609 LINC01109-201ENST00000603837 3081 ntBASIC5.32□□□□□ -1.56
GFRA3O60609 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
GFRA3O60609 AC090971.4-201ENST00000560291 1800 ntBASIC5.32□□□□□ -1.56
GFRA3O60609 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
GFRA3O60609 AC007529.1-201ENST00000418574 2178 ntBASIC5.32□□□□□ -1.56
GFRA3O60609 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
GFRA3O60609 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
GFRA3O60609 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
GFRA3O60609 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
GFRA3O60609 Y_RNA.85-201ENST00000363014 111 ntBASIC5.32□□□□□ -1.56
GFRA3O60609 RNU6-384P-201ENST00000364900 104 ntBASIC5.32□□□□□ -1.56
GFRA3O60609 MIR130A-201ENST00000385274 89 ntBASIC5.32□□□□□ -1.56
GFRA3O60609 RNU6-279P-201ENST00000391297 101 ntBASIC5.32□□□□□ -1.56
GFRA3O60609 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC5.32□□□□□ -1.56
GFRA3O60609 AC092811.1-202ENST00000433058 656 ntTSL 2 BASIC5.32□□□□□ -1.56
GFRA3O60609 AC245047.8-201ENST00000456455 284 ntBASIC5.32□□□□□ -1.56
GFRA3O60609 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC5.32□□□□□ -1.56
GFRA3O60609 AC010469.1-201ENST00000463864 576 ntBASIC5.32□□□□□ -1.56
GFRA3O60609 AC053481.1-201ENST00000467217 306 ntBASIC5.32□□□□□ -1.56
GFRA3O60609 RNU4ATAC10P-201ENST00000516967 122 ntBASIC5.32□□□□□ -1.56
GFRA3O60609 RN7SKP258-201ENST00000517151 304 ntBASIC5.32□□□□□ -1.56
GFRA3O60609 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC5.32□□□□□ -1.56
GFRA3O60609 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC5.32□□□□□ -1.56
GFRA3O60609 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC5.32□□□□□ -1.56
GFRA3O60609 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC5.32□□□□□ -1.56
GFRA3O60609 MIR4691-201ENST00000583764 85 ntBASIC5.32□□□□□ -1.56
GFRA3O60609 AC091178.2-201ENST00000584401 117 ntBASIC5.32□□□□□ -1.56
GFRA3O60609 VN1R85P-201ENST00000601587 426 ntBASIC5.32□□□□□ -1.56
GFRA3O60609 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC5.32□□□□□ -1.56
GFRA3O60609 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC5.32□□□□□ -1.56
GFRA3O60609 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
GFRA3O60609 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC5.32□□□□□ -1.56
GFRA3O60609 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
GFRA3O60609 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC5.32□□□□□ -1.56
GFRA3O60609 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 94.7 ms