Protein–RNA interactions for Protein: O43868

SLC28A2, Sodium/nucleoside cotransporter 2, humanhuman

Predictions only

Length 658 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A2O43868 MTCO3P13-201ENST00000577757 781 ntBASIC3.51□□□□□ -1.85
SLC28A2O43868 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC3.51□□□□□ -1.85
SLC28A2O43868 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.51□□□□□ -1.85
SLC28A2O43868 MIR5187-201ENST00000583479 76 ntBASIC3.51□□□□□ -1.85
SLC28A2O43868 AL353997.4-201ENST00000586196 166 ntBASIC3.51□□□□□ -1.85
SLC28A2O43868 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.51□□□□□ -1.85
SLC28A2O43868 AC010591.1-201ENST00000603941 649 ntBASIC3.51□□□□□ -1.85
SLC28A2O43868 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.51□□□□□ -1.85
SLC28A2O43868 AL355472.4-201ENST00000610233 626 ntBASIC3.51□□□□□ -1.85
SLC28A2O43868 PART1_1.1-201ENST00000611761 217 ntBASIC3.51□□□□□ -1.85
SLC28A2O43868 AC079684.1-201ENST00000621405 437 ntBASIC3.51□□□□□ -1.85
SLC28A2O43868 AC090574.1-201ENST00000623186 233 ntBASIC3.51□□□□□ -1.85
SLC28A2O43868 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
SLC28A2O43868 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC3.51□□□□□ -1.85
SLC28A2O43868 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
SLC28A2O43868 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
SLC28A2O43868 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
SLC28A2O43868 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
SLC28A2O43868 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.5□□□□□ -1.85
SLC28A2O43868 AC090337.1-201ENST00000579651 2074 ntBASIC3.5□□□□□ -1.85
SLC28A2O43868 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
SLC28A2O43868 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
SLC28A2O43868 RNVU1-3-201ENST00000364313 161 ntBASIC3.5□□□□□ -1.85
SLC28A2O43868 SNORA20.2-201ENST00000383922 131 ntBASIC3.5□□□□□ -1.85
SLC28A2O43868 MT-TC-201ENST00000387405 66 ntBASIC3.5□□□□□ -1.85
SLC28A2O43868 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
SLC28A2O43868 U3.19-201ENST00000390893 196 ntBASIC3.5□□□□□ -1.85
SLC28A2O43868 UBA52P6-201ENST00000399822 382 ntBASIC3.5□□□□□ -1.85
SLC28A2O43868 MIR1250-201ENST00000408098 113 ntBASIC3.5□□□□□ -1.85
SLC28A2O43868 BX842559.1-201ENST00000419615 532 ntBASIC3.5□□□□□ -1.85
SLC28A2O43868 AC007283.2-201ENST00000424739 197 ntBASIC3.5□□□□□ -1.85
SLC28A2O43868 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC3.5□□□□□ -1.85
SLC28A2O43868 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.5□□□□□ -1.85
SLC28A2O43868 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC3.5□□□□□ -1.85
SLC28A2O43868 AL138799.3-201ENST00000438968 350 ntBASIC3.5□□□□□ -1.85
SLC28A2O43868 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC3.5□□□□□ -1.85
SLC28A2O43868 AL049734.2-201ENST00000441066 616 ntBASIC3.5□□□□□ -1.85
SLC28A2O43868 AC016691.1-201ENST00000441321 413 ntBASIC3.5□□□□□ -1.85
SLC28A2O43868 USP9YP15-201ENST00000442391 422 ntBASIC3.5□□□□□ -1.85
SLC28A2O43868 HMGB1P25-201ENST00000468402 607 ntBASIC3.5□□□□□ -1.85
SLC28A2O43868 AC025518.1-201ENST00000479856 347 ntBASIC3.5□□□□□ -1.85
SLC28A2O43868 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.5□□□□□ -1.85
SLC28A2O43868 RPS3AP50-201ENST00000487064 803 ntBASIC3.5□□□□□ -1.85
SLC28A2O43868 AC093278.1-201ENST00000494700 600 ntBASIC3.5□□□□□ -1.85
SLC28A2O43868 AC078918.1-201ENST00000498515 228 ntBASIC3.5□□□□□ -1.85
SLC28A2O43868 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
SLC28A2O43868 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.5□□□□□ -1.85
SLC28A2O43868 AC093677.1-201ENST00000514414 678 ntBASIC3.5□□□□□ -1.85
SLC28A2O43868 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC3.5□□□□□ -1.85
SLC28A2O43868 RNA5SP401-201ENST00000515920 127 ntBASIC3.5□□□□□ -1.85
SLC28A2O43868 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC3.5□□□□□ -1.85
SLC28A2O43868 AC022616.3-201ENST00000523940 148 ntBASIC3.5□□□□□ -1.85
SLC28A2O43868 OR5B19P-201ENST00000531766 928 ntBASIC3.5□□□□□ -1.85
SLC28A2O43868 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC3.5□□□□□ -1.85
SLC28A2O43868 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.5□□□□□ -1.85
SLC28A2O43868 AC078814.3-201ENST00000553036 491 ntBASIC3.5□□□□□ -1.85
SLC28A2O43868 LARP7P3-201ENST00000579888 337 ntBASIC3.5□□□□□ -1.85
SLC28A2O43868 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC3.5□□□□□ -1.85
SLC28A2O43868 AC010928.3-201ENST00000587712 541 ntBASIC3.5□□□□□ -1.85
SLC28A2O43868 AL669831.4-202ENST00000590817 238 ntBASIC3.5□□□□□ -1.85
SLC28A2O43868 AC022432.1-201ENST00000595739 310 ntBASIC3.5□□□□□ -1.85
SLC28A2O43868 VN1R80P-201ENST00000597126 338 ntBASIC3.5□□□□□ -1.85
SLC28A2O43868 AC007687.1-201ENST00000602704 304 ntBASIC3.5□□□□□ -1.85
SLC28A2O43868 AL355812.1-201ENST00000603215 216 ntBASIC3.5□□□□□ -1.85
SLC28A2O43868 AC121334.2-201ENST00000605387 271 ntBASIC3.5□□□□□ -1.85
SLC28A2O43868 SNORA62.6-201ENST00000606322 83 ntBASIC3.5□□□□□ -1.85
SLC28A2O43868 AL355365.1-201ENST00000616480 294 ntBASIC3.5□□□□□ -1.85
SLC28A2O43868 AL356585.4-201ENST00000623078 1229 ntBASIC3.5□□□□□ -1.85
SLC28A2O43868 AL359757.2-201ENST00000624309 274 ntBASIC3.5□□□□□ -1.85
SLC28A2O43868 AC091925.2-201ENST00000625059 256 ntBASIC3.5□□□□□ -1.85
SLC28A2O43868 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC3.5□□□□□ -1.85
SLC28A2O43868 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.5□□□□□ -1.85
SLC28A2O43868 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
SLC28A2O43868 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.5□□□□□ -1.85
SLC28A2O43868 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.5□□□□□ -1.85
SLC28A2O43868 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.5□□□□□ -1.85
SLC28A2O43868 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
SLC28A2O43868 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC3.49□□□□□ -1.85
SLC28A2O43868 MTND5P33-201ENST00000571250 1450 ntBASIC3.49□□□□□ -1.85
SLC28A2O43868 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
SLC28A2O43868 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.49□□□□□ -1.85
SLC28A2O43868 Y_RNA.58-201ENST00000362807 102 ntBASIC3.49□□□□□ -1.85
SLC28A2O43868 Y_RNA.154-201ENST00000363624 102 ntBASIC3.49□□□□□ -1.85
SLC28A2O43868 Y_RNA.157-201ENST00000363638 102 ntBASIC3.49□□□□□ -1.85
SLC28A2O43868 RNY3P1-201ENST00000365085 102 ntBASIC3.49□□□□□ -1.85
SLC28A2O43868 RNY3-201ENST00000365484 102 ntBASIC3.49□□□□□ -1.85
SLC28A2O43868 RNU6-1227P-201ENST00000383981 107 ntBASIC3.49□□□□□ -1.85
SLC28A2O43868 Y_RNA.490-201ENST00000384413 102 ntBASIC3.49□□□□□ -1.85
SLC28A2O43868 Y_RNA.493-201ENST00000384422 102 ntBASIC3.49□□□□□ -1.85
SLC28A2O43868 RNU6-692P-201ENST00000384496 107 ntBASIC3.49□□□□□ -1.85
SLC28A2O43868 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
SLC28A2O43868 RNA5SP424-201ENST00000390988 115 ntBASIC3.49□□□□□ -1.85
SLC28A2O43868 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
SLC28A2O43868 ATP5A1P2-201ENST00000412323 255 ntBASIC3.49□□□□□ -1.85
SLC28A2O43868 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.49□□□□□ -1.85
SLC28A2O43868 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC3.49□□□□□ -1.85
SLC28A2O43868 AL354751.2-201ENST00000415471 210 ntBASIC3.49□□□□□ -1.85
SLC28A2O43868 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC3.49□□□□□ -1.85
SLC28A2O43868 USP9YP20-201ENST00000419224 558 ntBASIC3.49□□□□□ -1.85
SLC28A2O43868 RPL36AP53-201ENST00000432891 316 ntBASIC3.49□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 119.1 ms