Protein–RNA interactions for Protein: O15516

CLOCK, Circadian locomoter output cycles protein kaput, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCKO15516 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC2.33□□□□□ -2.04
CLOCKO15516 AC135507.1-201ENST00000607214 561 ntBASIC2.33□□□□□ -2.04
CLOCKO15516 AC131235.4-201ENST00000609288 620 ntBASIC2.33□□□□□ -2.04
CLOCKO15516 AL138960.2-201ENST00000625145 535 ntBASIC2.33□□□□□ -2.04
CLOCKO15516 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC2.33□□□□□ -2.04
CLOCKO15516 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC2.33□□□□□ -2.04
CLOCKO15516 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.33□□□□□ -2.04
CLOCKO15516 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.32□□□□□ -2.04
CLOCKO15516 AC009902.3-201ENST00000606235 2172 ntBASIC2.32□□□□□ -2.04
CLOCKO15516 RNU5E-10P-201ENST00000363506 118 ntBASIC2.32□□□□□ -2.04
CLOCKO15516 RNA5SP456-201ENST00000364002 114 ntBASIC2.32□□□□□ -2.04
CLOCKO15516 RNU6-1072P-201ENST00000384703 107 ntBASIC2.32□□□□□ -2.04
CLOCKO15516 RNU6-443P-201ENST00000384780 107 ntBASIC2.32□□□□□ -2.04
CLOCKO15516 RNU6-750P-201ENST00000390946 107 ntBASIC2.32□□□□□ -2.04
CLOCKO15516 AL139039.1-201ENST00000401900 692 ntBASIC2.32□□□□□ -2.04
CLOCKO15516 ERHP2-201ENST00000402323 299 ntBASIC2.32□□□□□ -2.04
CLOCKO15516 UBE2FP1-201ENST00000416536 447 ntBASIC2.32□□□□□ -2.04
CLOCKO15516 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.32□□□□□ -2.04
CLOCKO15516 ATP5F1P1-201ENST00000433775 569 ntBASIC2.32□□□□□ -2.04
CLOCKO15516 MTCO1P53-201ENST00000441633 699 ntBASIC2.32□□□□□ -2.04
CLOCKO15516 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC2.32□□□□□ -2.04
CLOCKO15516 AL031659.1-201ENST00000447075 539 ntBASIC2.32□□□□□ -2.04
CLOCKO15516 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC2.32□□□□□ -2.04
CLOCKO15516 USP9YP10-201ENST00000454868 628 ntBASIC2.32□□□□□ -2.04
CLOCKO15516 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC2.32□□□□□ -2.04
CLOCKO15516 AC233279.1-201ENST00000455300 423 ntBASIC2.32□□□□□ -2.04
CLOCKO15516 RPS15AP36-201ENST00000492022 382 ntBASIC2.32□□□□□ -2.04
CLOCKO15516 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.32□□□□□ -2.04
CLOCKO15516 AC105252.1-201ENST00000503089 286 ntBASIC2.32□□□□□ -2.04
CLOCKO15516 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC2.32□□□□□ -2.04
CLOCKO15516 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC2.32□□□□□ -2.04
CLOCKO15516 SCARNA17.1-201ENST00000516211 143 ntBASIC2.32□□□□□ -2.04
CLOCKO15516 SCARNA17.2-201ENST00000516334 143 ntBASIC2.32□□□□□ -2.04
CLOCKO15516 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC2.32□□□□□ -2.04
CLOCKO15516 AP003467.2-201ENST00000520175 319 ntBASIC2.32□□□□□ -2.04
CLOCKO15516 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.32□□□□□ -2.04
CLOCKO15516 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
CLOCKO15516 AC243972.3-201ENST00000539655 198 ntBASIC2.32□□□□□ -2.04
CLOCKO15516 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.32□□□□□ -2.04
CLOCKO15516 AL359212.1-201ENST00000556608 614 ntBASIC2.32□□□□□ -2.04
CLOCKO15516 MIR5694-201ENST00000581190 76 ntBASIC2.32□□□□□ -2.04
CLOCKO15516 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC2.32□□□□□ -2.04
CLOCKO15516 AL356280.1-201ENST00000603614 379 ntBASIC2.32□□□□□ -2.04
CLOCKO15516 AL357094.1-201ENST00000603845 844 ntBASIC2.32□□□□□ -2.04
CLOCKO15516 AC006270.3-201ENST00000605967 1036 ntBASIC2.32□□□□□ -2.04
CLOCKO15516 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC2.32□□□□□ -2.04
CLOCKO15516 AC245297.2-201ENST00000610119 565 ntBASIC2.32□□□□□ -2.04
CLOCKO15516 SCARNA17.4-201ENST00000614296 143 ntBASIC2.32□□□□□ -2.04
CLOCKO15516 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC2.32□□□□□ -2.04
CLOCKO15516 MIR203B-201ENST00000636080 86 ntBASIC2.32□□□□□ -2.04
CLOCKO15516 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
CLOCKO15516 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
CLOCKO15516 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.32□□□□□ -2.04
CLOCKO15516 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.32□□□□□ -2.04
CLOCKO15516 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
CLOCKO15516 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
CLOCKO15516 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
CLOCKO15516 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
CLOCKO15516 MIR21-201ENST00000362134 72 ntBASIC2.31□□□□□ -2.04
CLOCKO15516 SNORD62.1-201ENST00000362541 86 ntBASIC2.31□□□□□ -2.04
CLOCKO15516 SNORA41-201ENST00000384675 132 ntBASIC2.31□□□□□ -2.04
CLOCKO15516 AL445529.1-201ENST00000398713 389 ntBASIC2.31□□□□□ -2.04
CLOCKO15516 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC2.31□□□□□ -2.04
CLOCKO15516 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.31□□□□□ -2.04
CLOCKO15516 RNU2-49P-201ENST00000410666 184 ntBASIC2.31□□□□□ -2.04
CLOCKO15516 USP9YP33-201ENST00000412220 421 ntBASIC2.31□□□□□ -2.04
CLOCKO15516 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.31□□□□□ -2.04
CLOCKO15516 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
CLOCKO15516 WARS2P1-201ENST00000429678 537 ntBASIC2.31□□□□□ -2.04
CLOCKO15516 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC2.31□□□□□ -2.04
CLOCKO15516 USP9YP35-201ENST00000435696 412 ntBASIC2.31□□□□□ -2.04
CLOCKO15516 MTCO3P45-201ENST00000443036 613 ntBASIC2.31□□□□□ -2.04
CLOCKO15516 AC104389.3-201ENST00000445629 235 ntBASIC2.31□□□□□ -2.04
CLOCKO15516 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC2.31□□□□□ -2.04
CLOCKO15516 EEF1E1P1-201ENST00000446998 430 ntBASIC2.31□□□□□ -2.04
CLOCKO15516 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.31□□□□□ -2.04
CLOCKO15516 PAXBP1P1-201ENST00000449315 447 ntBASIC2.31□□□□□ -2.04
CLOCKO15516 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC2.31□□□□□ -2.04
CLOCKO15516 HMGB3P3-201ENST00000510526 400 ntBASIC2.31□□□□□ -2.04
CLOCKO15516 AC112673.1-201ENST00000513168 575 ntBASIC2.31□□□□□ -2.04
CLOCKO15516 AC110760.3-202ENST00000515177 371 ntBASIC2.31□□□□□ -2.04
CLOCKO15516 RNU4-29P-201ENST00000515943 174 ntBASIC2.31□□□□□ -2.04
CLOCKO15516 AC023538.1-201ENST00000534576 736 ntBASIC2.31□□□□□ -2.04
CLOCKO15516 YWHAZP1-201ENST00000556286 722 ntBASIC2.31□□□□□ -2.04
CLOCKO15516 AC009097.3-201ENST00000563557 1018 ntBASIC2.31□□□□□ -2.04
CLOCKO15516 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC2.31□□□□□ -2.04
CLOCKO15516 AC018645.2-201ENST00000609151 472 ntBASIC2.31□□□□□ -2.04
CLOCKO15516 AC013562.2-201ENST00000611632 603 ntBASIC2.31□□□□□ -2.04
CLOCKO15516 MIR6817-201ENST00000615588 66 ntBASIC2.31□□□□□ -2.04
CLOCKO15516 AC068057.2-201ENST00000624047 895 ntBASIC2.31□□□□□ -2.04
CLOCKO15516 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC2.31□□□□□ -2.04
CLOCKO15516 AC116618.1-201ENST00000634617 774 ntBASIC2.31□□□□□ -2.04
CLOCKO15516 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
CLOCKO15516 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
CLOCKO15516 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
CLOCKO15516 AL136310.1-201ENST00000404926 654 ntBASIC2.3□□□□□ -2.04
CLOCKO15516 MTATP6P20-201ENST00000414147 562 ntBASIC2.3□□□□□ -2.04
CLOCKO15516 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC2.3□□□□□ -2.04
CLOCKO15516 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.3□□□□□ -2.04
CLOCKO15516 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC2.3□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 90 ms