Protein–RNA interactions for Protein: O00479

HMGN4, High mobility group nucleosome-binding domain-containing protein 4, humanhuman

Predictions only

Length 90 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4O00479 RNU4-91P-201ENST00000364778 135 ntBASIC1.06□□□□□ -2.24
HMGN4O00479 MIR1285-1-201ENST00000408593 84 ntBASIC1.06□□□□□ -2.24
HMGN4O00479 STAT4-203ENST00000409995 709 ntTSL 5 BASIC1.06□□□□□ -2.24
HMGN4O00479 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.06□□□□□ -2.24
HMGN4O00479 AL109913.1-201ENST00000421173 514 ntBASIC1.06□□□□□ -2.24
HMGN4O00479 AL353729.1-201ENST00000425044 720 ntBASIC1.06□□□□□ -2.24
HMGN4O00479 AL009174.1-201ENST00000426577 416 ntBASIC1.06□□□□□ -2.24
HMGN4O00479 RPL7P29-201ENST00000437151 728 ntBASIC1.06□□□□□ -2.24
HMGN4O00479 RPL23AP16-201ENST00000441715 421 ntBASIC1.06□□□□□ -2.24
HMGN4O00479 AC104108.1-201ENST00000509930 412 ntBASIC1.06□□□□□ -2.24
HMGN4O00479 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC1.06□□□□□ -2.24
HMGN4O00479 RN7SKP219-201ENST00000516825 296 ntBASIC1.06□□□□□ -2.24
HMGN4O00479 AC087441.2-201ENST00000529141 262 ntBASIC1.06□□□□□ -2.24
HMGN4O00479 AC118273.2-201ENST00000532092 465 ntBASIC1.06□□□□□ -2.24
HMGN4O00479 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC1.06□□□□□ -2.24
HMGN4O00479 MIR4285-201ENST00000581001 85 ntBASIC1.06□□□□□ -2.24
HMGN4O00479 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC1.06□□□□□ -2.24
HMGN4O00479 AC073308.1-201ENST00000623696 305 ntBASIC1.06□□□□□ -2.24
HMGN4O00479 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.06□□□□□ -2.24
HMGN4O00479 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
HMGN4O00479 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
HMGN4O00479 RNU6-1035P-201ENST00000384477 107 ntBASIC1.05□□□□□ -2.24
HMGN4O00479 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
HMGN4O00479 AP1B1P2-201ENST00000416196 106 ntBASIC1.05□□□□□ -2.24
HMGN4O00479 TRBV26OR9-2-201ENST00000432077 293 ntBASIC1.05□□□□□ -2.24
HMGN4O00479 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC1.05□□□□□ -2.24
HMGN4O00479 Z80107.1-201ENST00000436830 412 ntBASIC1.05□□□□□ -2.24
HMGN4O00479 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC1.05□□□□□ -2.24
HMGN4O00479 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC1.05□□□□□ -2.24
HMGN4O00479 AL589880.1-201ENST00000448271 287 ntBASIC1.05□□□□□ -2.24
HMGN4O00479 AC005297.2-201ENST00000450430 606 ntBASIC1.05□□□□□ -2.24
HMGN4O00479 AC092902.1-201ENST00000486999 259 ntBASIC1.05□□□□□ -2.24
HMGN4O00479 AC093852.1-201ENST00000503587 266 ntBASIC1.05□□□□□ -2.24
HMGN4O00479 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC1.05□□□□□ -2.24
HMGN4O00479 AC010186.2-204ENST00000537668 439 ntBASIC1.05□□□□□ -2.24
HMGN4O00479 AL160236.1-201ENST00000556317 195 ntBASIC1.05□□□□□ -2.24
HMGN4O00479 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC1.05□□□□□ -2.24
HMGN4O00479 AC008269.2-201ENST00000561915 1105 ntBASIC1.05□□□□□ -2.24
HMGN4O00479 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC1.05□□□□□ -2.24
HMGN4O00479 HMGB1P51-201ENST00000605166 638 ntBASIC1.05□□□□□ -2.24
HMGN4O00479 AC012443.1-201ENST00000605605 231 ntBASIC1.05□□□□□ -2.24
HMGN4O00479 MKKS-204ENST00000639674 192 ntBASIC1.05□□□□□ -2.24
HMGN4O00479 RNA5SP99-201ENST00000364020 114 ntBASIC1.04□□□□□ -2.24
HMGN4O00479 RNU6-19P-201ENST00000384718 107 ntBASIC1.04□□□□□ -2.24
HMGN4O00479 OR9R1P-201ENST00000412200 877 ntBASIC1.04□□□□□ -2.24
HMGN4O00479 OR6C66P-201ENST00000414917 930 ntBASIC1.04□□□□□ -2.24
HMGN4O00479 BTF3P4-201ENST00000418852 495 ntBASIC1.04□□□□□ -2.24
HMGN4O00479 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC1.04□□□□□ -2.24
HMGN4O00479 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC1.04□□□□□ -2.24
HMGN4O00479 AC097499.1-201ENST00000444277 208 ntBASIC1.04□□□□□ -2.24
HMGN4O00479 RPL23AP6-201ENST00000446637 472 ntBASIC1.04□□□□□ -2.24
HMGN4O00479 HMGN2P10-201ENST00000448085 265 ntBASIC1.04□□□□□ -2.24
HMGN4O00479 RPL31P60-201ENST00000478450 367 ntBASIC1.04□□□□□ -2.24
HMGN4O00479 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC1.04□□□□□ -2.24
HMGN4O00479 AC140059.1-201ENST00000489238 361 ntBASIC1.04□□□□□ -2.24
HMGN4O00479 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC1.04□□□□□ -2.24
HMGN4O00479 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC1.04□□□□□ -2.24
HMGN4O00479 RNU5F-8P-201ENST00000515941 111 ntBASIC1.04□□□□□ -2.24
HMGN4O00479 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.04□□□□□ -2.24
HMGN4O00479 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC1.04□□□□□ -2.24
HMGN4O00479 LINC00933-203ENST00000559812 219 ntBASIC1.04□□□□□ -2.24
HMGN4O00479 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC1.04□□□□□ -2.24
HMGN4O00479 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC1.04□□□□□ -2.24
HMGN4O00479 AC243960.4-201ENST00000600532 288 ntBASIC1.04□□□□□ -2.24
HMGN4O00479 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC1.04□□□□□ -2.24
HMGN4O00479 AC007038.2-201ENST00000608095 740 ntBASIC1.04□□□□□ -2.24
HMGN4O00479 AC003001.2-201ENST00000616294 831 ntBASIC1.04□□□□□ -2.24
HMGN4O00479 AC073968.1-201ENST00000618594 637 ntBASIC1.04□□□□□ -2.24
HMGN4O00479 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC1.04□□□□□ -2.24
HMGN4O00479 AC109454.4-201ENST00000623411 649 ntBASIC1.04□□□□□ -2.24
HMGN4O00479 AP003400.5-201ENST00000624827 617 ntBASIC1.04□□□□□ -2.24
HMGN4O00479 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC1.04□□□□□ -2.24
HMGN4O00479 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC1.04□□□□□ -2.24
HMGN4O00479 AL356473.1-201ENST00000406203 1408 ntBASIC1.04□□□□□ -2.24
HMGN4O00479 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC1.04□□□□□ -2.24
HMGN4O00479 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.04□□□□□ -2.24
HMGN4O00479 RNA5SP125-201ENST00000364843 120 ntBASIC1.03□□□□□ -2.24
HMGN4O00479 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC1.03□□□□□ -2.24
HMGN4O00479 RN7SKP158-201ENST00000410453 326 ntBASIC1.03□□□□□ -2.24
HMGN4O00479 AL133384.1-201ENST00000412744 351 ntBASIC1.03□□□□□ -2.24
HMGN4O00479 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
HMGN4O00479 OFD1P12Y-201ENST00000427963 1207 ntBASIC1.03□□□□□ -2.24
HMGN4O00479 OFD1P13Y-201ENST00000431179 1232 ntBASIC1.03□□□□□ -2.24
HMGN4O00479 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC1.03□□□□□ -2.24
HMGN4O00479 RPS6P15-201ENST00000431996 751 ntBASIC1.03□□□□□ -2.24
HMGN4O00479 ARL5AP3-201ENST00000439327 386 ntBASIC1.03□□□□□ -2.24
HMGN4O00479 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC1.03□□□□□ -2.24
HMGN4O00479 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC1.03□□□□□ -2.24
HMGN4O00479 RNU1-98P-201ENST00000458992 160 ntBASIC1.03□□□□□ -2.24
HMGN4O00479 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC1.03□□□□□ -2.24
HMGN4O00479 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC1.03□□□□□ -2.24
HMGN4O00479 RNU6-970P-201ENST00000516312 107 ntBASIC1.03□□□□□ -2.24
HMGN4O00479 RNU6-798P-201ENST00000516912 103 ntBASIC1.03□□□□□ -2.24
HMGN4O00479 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC1.03□□□□□ -2.24
HMGN4O00479 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC1.03□□□□□ -2.24
HMGN4O00479 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC1.03□□□□□ -2.24
HMGN4O00479 AC025918.2-201ENST00000558683 763 ntBASIC1.03□□□□□ -2.24
HMGN4O00479 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC1.03□□□□□ -2.24
HMGN4O00479 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC1.03□□□□□ -2.24
HMGN4O00479 AC093838.1-201ENST00000613014 469 ntBASIC1.03□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 148.1 ms