Protein–RNA interactions for Protein: O00442

RTCA, RNA 3'-terminal phosphate cyclase, humanhuman

Known RBP Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCAO00442 AL359999.1-201ENST00000604513 294 ntBASIC3□□□□□ -1.93
RTCAO00442 AL627309.6-201ENST00000606857 840 ntBASIC3□□□□□ -1.93
RTCAO00442 OR10AB1P-201ENST00000609613 938 ntBASIC3□□□□□ -1.93
RTCAO00442 AL355472.4-201ENST00000610233 626 ntBASIC3□□□□□ -1.93
RTCAO00442 AL591516.1-201ENST00000611326 274 ntBASIC3□□□□□ -1.93
RTCAO00442 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC3□□□□□ -1.93
RTCAO00442 AC009159.1-201ENST00000618386 642 ntBASIC3□□□□□ -1.93
RTCAO00442 Z69908.1-201ENST00000622603 247 ntBASIC3□□□□□ -1.93
RTCAO00442 AC004777.1-201ENST00000624317 287 ntBASIC3□□□□□ -1.93
RTCAO00442 AC025048.6-202ENST00000627667 438 ntBASIC3□□□□□ -1.93
RTCAO00442 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC3□□□□□ -1.93
RTCAO00442 MAPK10-266ENST00000641066 6555 ntBASIC2.99□□□□□ -1.93
RTCAO00442 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
RTCAO00442 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
RTCAO00442 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
RTCAO00442 OR1S2-201ENST00000302592 978 ntBASIC2.99□□□□□ -1.93
RTCAO00442 FTLP6-201ENST00000355274 422 ntBASIC2.99□□□□□ -1.93
RTCAO00442 RNA5SP383-201ENST00000362934 120 ntBASIC2.99□□□□□ -1.93
RTCAO00442 RNA5-8SP4-201ENST00000365096 150 ntBASIC2.99□□□□□ -1.93
RTCAO00442 RNU6-533P-201ENST00000384144 107 ntBASIC2.99□□□□□ -1.93
RTCAO00442 MIR34B-201ENST00000385076 84 ntBASIC2.99□□□□□ -1.93
RTCAO00442 AL139281.1-201ENST00000422120 335 ntBASIC2.99□□□□□ -1.93
RTCAO00442 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC2.99□□□□□ -1.93
RTCAO00442 AC007919.1-201ENST00000429380 217 ntBASIC2.99□□□□□ -1.93
RTCAO00442 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC2.99□□□□□ -1.93
RTCAO00442 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC2.99□□□□□ -1.93
RTCAO00442 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC2.99□□□□□ -1.93
RTCAO00442 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC2.99□□□□□ -1.93
RTCAO00442 GAPDHP27-201ENST00000447427 1020 ntBASIC2.99□□□□□ -1.93
RTCAO00442 TPT1P14-201ENST00000448018 505 ntBASIC2.99□□□□□ -1.93
RTCAO00442 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC2.99□□□□□ -1.93
RTCAO00442 RNU7-59P-201ENST00000459101 61 ntBASIC2.99□□□□□ -1.93
RTCAO00442 RPL23AP70-201ENST00000483361 460 ntBASIC2.99□□□□□ -1.93
RTCAO00442 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC2.99□□□□□ -1.93
RTCAO00442 AC100870.1-201ENST00000522035 505 ntBASIC2.99□□□□□ -1.93
RTCAO00442 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC2.99□□□□□ -1.93
RTCAO00442 COX6CP5-201ENST00000527162 228 ntBASIC2.99□□□□□ -1.93
RTCAO00442 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC2.99□□□□□ -1.93
RTCAO00442 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC2.99□□□□□ -1.93
RTCAO00442 ZNF519P3-201ENST00000557158 1032 ntBASIC2.99□□□□□ -1.93
RTCAO00442 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC2.99□□□□□ -1.93
RTCAO00442 AC012414.6-201ENST00000568241 401 ntBASIC2.99□□□□□ -1.93
RTCAO00442 AC011471.1-201ENST00000585766 187 ntBASIC2.99□□□□□ -1.93
RTCAO00442 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC2.99□□□□□ -1.93
RTCAO00442 AC068790.3-201ENST00000602988 553 ntBASIC2.99□□□□□ -1.93
RTCAO00442 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC2.99□□□□□ -1.93
RTCAO00442 AC009878.1-201ENST00000621819 340 ntBASIC2.99□□□□□ -1.93
RTCAO00442 FGF7P2-201ENST00000332473 296 ntBASIC2.98□□□□□ -1.93
RTCAO00442 RNU4-40P-201ENST00000364351 143 ntBASIC2.98□□□□□ -1.93
RTCAO00442 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC2.98□□□□□ -1.93
RTCAO00442 AL122016.1-201ENST00000403365 367 ntBASIC2.98□□□□□ -1.93
RTCAO00442 MIR1302-8-201ENST00000408342 128 ntBASIC2.98□□□□□ -1.93
RTCAO00442 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC2.98□□□□□ -1.93
RTCAO00442 RPL32P35-201ENST00000415214 394 ntBASIC2.98□□□□□ -1.93
RTCAO00442 SLC44A3-AS1-205ENST00000424505 612 ntBASIC2.98□□□□□ -1.93
RTCAO00442 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC2.98□□□□□ -1.93
RTCAO00442 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC2.98□□□□□ -1.93
RTCAO00442 FTH1P1-201ENST00000437933 532 ntBASIC2.98□□□□□ -1.93
RTCAO00442 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC2.98□□□□□ -1.93
RTCAO00442 NANOGNBP1-201ENST00000448444 480 ntBASIC2.98□□□□□ -1.93
RTCAO00442 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC2.98□□□□□ -1.93
RTCAO00442 BX510359.1-201ENST00000456973 237 ntBASIC2.98□□□□□ -1.93
RTCAO00442 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC2.98□□□□□ -1.93
RTCAO00442 RN7SL504P-201ENST00000494496 287 ntBASIC2.98□□□□□ -1.93
RTCAO00442 AL358832.1-201ENST00000497800 389 ntBASIC2.98□□□□□ -1.93
RTCAO00442 AC135721.1-201ENST00000497954 479 ntBASIC2.98□□□□□ -1.93
RTCAO00442 SUMO2P6-201ENST00000505273 288 ntBASIC2.98□□□□□ -1.93
RTCAO00442 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC2.98□□□□□ -1.93
RTCAO00442 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC2.98□□□□□ -1.93
RTCAO00442 SCARNA11.3-201ENST00000517276 130 ntBASIC2.98□□□□□ -1.93
RTCAO00442 MTND4LP18-201ENST00000526864 291 ntBASIC2.98□□□□□ -1.93
RTCAO00442 AP000857.1-201ENST00000532151 543 ntBASIC2.98□□□□□ -1.93
RTCAO00442 AL133153.1-201ENST00000557756 303 ntBASIC2.98□□□□□ -1.93
RTCAO00442 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC2.98□□□□□ -1.93
RTCAO00442 AL356432.3-201ENST00000568952 465 ntBASIC2.98□□□□□ -1.93
RTCAO00442 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC2.98□□□□□ -1.93
RTCAO00442 AP005136.1-201ENST00000579765 429 ntBASIC2.98□□□□□ -1.93
RTCAO00442 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC2.98□□□□□ -1.93
RTCAO00442 UBL5P2-201ENST00000583788 219 ntBASIC2.98□□□□□ -1.93
RTCAO00442 OR1M4P-201ENST00000589199 287 ntBASIC2.98□□□□□ -1.93
RTCAO00442 AC112191.3-201ENST00000604371 277 ntBASIC2.98□□□□□ -1.93
RTCAO00442 AC012468.1-201ENST00000604888 430 ntBASIC2.98□□□□□ -1.93
RTCAO00442 AC068276.1-201ENST00000605793 379 ntBASIC2.98□□□□□ -1.93
RTCAO00442 AC245008.1-201ENST00000608123 476 ntBASIC2.98□□□□□ -1.93
RTCAO00442 AC245517.5-201ENST00000611529 162 ntBASIC2.98□□□□□ -1.93
RTCAO00442 UBE2Q2P2-203ENST00000613592 761 ntBASIC2.98□□□□□ -1.93
RTCAO00442 AL158063.1-201ENST00000615349 536 ntBASIC2.98□□□□□ -1.93
RTCAO00442 AC027807.2-201ENST00000616099 408 ntBASIC2.98□□□□□ -1.93
RTCAO00442 AC009090.3-201ENST00000616553 565 ntBASIC2.98□□□□□ -1.93
RTCAO00442 AC018692.3-201ENST00000623929 123 ntBASIC2.98□□□□□ -1.93
RTCAO00442 AL603839.4-201ENST00000624658 1005 ntBASIC2.98□□□□□ -1.93
RTCAO00442 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC2.98□□□□□ -1.93
RTCAO00442 AC099654.13-201ENST00000639774 207 ntBASIC2.98□□□□□ -1.93
RTCAO00442 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC2.98□□□□□ -1.93
RTCAO00442 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
RTCAO00442 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
RTCAO00442 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.98□□□□□ -1.93
RTCAO00442 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.97□□□□□ -1.93
RTCAO00442 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.97□□□□□ -1.93
RTCAO00442 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 92.4 ms