Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 OR10R1P-201ENST00000441524 1141 ntBASIC1.99□□□□□ -2.09
UPK1AO00322 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC1.99□□□□□ -2.09
UPK1AO00322 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC1.99□□□□□ -2.09
UPK1AO00322 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC1.99□□□□□ -2.09
UPK1AO00322 AC105252.1-201ENST00000503089 286 ntBASIC1.99□□□□□ -2.09
UPK1AO00322 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC1.99□□□□□ -2.09
UPK1AO00322 AC114786.4-201ENST00000508771 728 ntBASIC1.99□□□□□ -2.09
UPK1AO00322 AC114797.1-201ENST00000514003 728 ntBASIC1.99□□□□□ -2.09
UPK1AO00322 RNY4P37-201ENST00000516225 96 ntBASIC1.99□□□□□ -2.09
UPK1AO00322 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC1.99□□□□□ -2.09
UPK1AO00322 AC022634.1-201ENST00000520765 532 ntBASIC1.99□□□□□ -2.09
UPK1AO00322 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC1.99□□□□□ -2.09
UPK1AO00322 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC1.99□□□□□ -2.09
UPK1AO00322 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC1.99□□□□□ -2.09
UPK1AO00322 MIR4448-201ENST00000584360 86 ntBASIC1.99□□□□□ -2.09
UPK1AO00322 AC008498.1-201ENST00000613012 531 ntBASIC1.99□□□□□ -2.09
UPK1AO00322 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC1.99□□□□□ -2.09
UPK1AO00322 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
UPK1AO00322 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
UPK1AO00322 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.98□□□□□ -2.09
UPK1AO00322 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
UPK1AO00322 SLC10A5P1-201ENST00000379063 1306 ntBASIC1.98□□□□□ -2.09
UPK1AO00322 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC1.98□□□□□ -2.09
UPK1AO00322 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC1.98□□□□□ -2.09
UPK1AO00322 SNORA68.1-201ENST00000364537 132 ntBASIC1.98□□□□□ -2.09
UPK1AO00322 RNU6-343P-201ENST00000364709 104 ntBASIC1.98□□□□□ -2.09
UPK1AO00322 Y_RNA.408-201ENST00000383987 102 ntBASIC1.98□□□□□ -2.09
UPK1AO00322 SNORA6-201ENST00000384033 151 ntBASIC1.98□□□□□ -2.09
UPK1AO00322 RNU6-298P-201ENST00000390888 96 ntBASIC1.98□□□□□ -2.09
UPK1AO00322 RNU6-516P-201ENST00000411381 104 ntBASIC1.98□□□□□ -2.09
UPK1AO00322 AL356320.1-201ENST00000429616 163 ntBASIC1.98□□□□□ -2.09
UPK1AO00322 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC1.98□□□□□ -2.09
UPK1AO00322 PGBD4P3-201ENST00000440731 581 ntBASIC1.98□□□□□ -2.09
UPK1AO00322 RPL7P36-201ENST00000444633 681 ntBASIC1.98□□□□□ -2.09
UPK1AO00322 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC1.98□□□□□ -2.09
UPK1AO00322 AC021382.1-201ENST00000483523 359 ntBASIC1.98□□□□□ -2.09
UPK1AO00322 MRPL42P6-201ENST00000486397 371 ntBASIC1.98□□□□□ -2.09
UPK1AO00322 AC109486.1-201ENST00000486833 374 ntBASIC1.98□□□□□ -2.09
UPK1AO00322 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC1.98□□□□□ -2.09
UPK1AO00322 AC093752.1-206ENST00000511823 336 ntBASIC1.98□□□□□ -2.09
UPK1AO00322 RNU6-150P-201ENST00000516237 95 ntBASIC1.98□□□□□ -2.09
UPK1AO00322 RNU6-467P-201ENST00000517027 110 ntBASIC1.98□□□□□ -2.09
UPK1AO00322 CA1-215ENST00000522389 551 ntTSL 3 BASIC1.98□□□□□ -2.09
UPK1AO00322 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC1.98□□□□□ -2.09
UPK1AO00322 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC1.98□□□□□ -2.09
UPK1AO00322 RPS3AP23-202ENST00000574601 686 ntBASIC1.98□□□□□ -2.09
UPK1AO00322 AC005951.2-201ENST00000576282 495 ntBASIC1.98□□□□□ -2.09
UPK1AO00322 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC1.98□□□□□ -2.09
UPK1AO00322 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC1.98□□□□□ -2.09
UPK1AO00322 VN1R83P-201ENST00000595685 445 ntBASIC1.98□□□□□ -2.09
UPK1AO00322 AC021749.1-201ENST00000604322 607 ntBASIC1.98□□□□□ -2.09
UPK1AO00322 MTND4LP5-201ENST00000605152 292 ntBASIC1.98□□□□□ -2.09
UPK1AO00322 AC104763.3-201ENST00000613765 618 ntBASIC1.98□□□□□ -2.09
UPK1AO00322 AC123767.1-202ENST00000620407 817 ntBASIC1.98□□□□□ -2.09
UPK1AO00322 MIR7515-201ENST00000637837 67 ntBASIC1.98□□□□□ -2.09
UPK1AO00322 AL390862.1-201ENST00000635467 1469 ntBASIC1.98□□□□□ -2.09
UPK1AO00322 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC1.98□□□□□ -2.09
UPK1AO00322 PAPPA-AS1-201ENST00000445861 2450 ntBASIC1.98□□□□□ -2.09
UPK1AO00322 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.98□□□□□ -2.09
UPK1AO00322 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC1.97□□□□□ -2.09
UPK1AO00322 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.97□□□□□ -2.09
UPK1AO00322 AL138713.1-201ENST00000624026 2130 ntBASIC1.97□□□□□ -2.09
UPK1AO00322 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC1.97□□□□□ -2.09
UPK1AO00322 MTND4P1-201ENST00000457501 1466 ntBASIC1.97□□□□□ -2.09
UPK1AO00322 RNU4-51P-201ENST00000364206 140 ntBASIC1.97□□□□□ -2.09
UPK1AO00322 RNU1-39P-201ENST00000383897 165 ntBASIC1.97□□□□□ -2.09
UPK1AO00322 Y_RNA.500-201ENST00000384466 111 ntBASIC1.97□□□□□ -2.09
UPK1AO00322 RNU6-114P-201ENST00000384704 105 ntBASIC1.97□□□□□ -2.09
UPK1AO00322 SNORA40.2-201ENST00000390847 128 ntBASIC1.97□□□□□ -2.09
UPK1AO00322 AL109755.1-201ENST00000401791 649 ntBASIC1.97□□□□□ -2.09
UPK1AO00322 SNORA11.4-201ENST00000408823 129 ntBASIC1.97□□□□□ -2.09
UPK1AO00322 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC1.97□□□□□ -2.09
UPK1AO00322 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC1.97□□□□□ -2.09
UPK1AO00322 MTCO2P25-201ENST00000447065 681 ntBASIC1.97□□□□□ -2.09
UPK1AO00322 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC1.97□□□□□ -2.09
UPK1AO00322 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC1.97□□□□□ -2.09
UPK1AO00322 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC1.97□□□□□ -2.09
UPK1AO00322 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC1.97□□□□□ -2.09
UPK1AO00322 ATG12P2-201ENST00000456830 416 ntBASIC1.97□□□□□ -2.09
UPK1AO00322 RPL26P9-201ENST00000457466 433 ntBASIC1.97□□□□□ -2.09
UPK1AO00322 MRPS17P3-201ENST00000465453 385 ntBASIC1.97□□□□□ -2.09
UPK1AO00322 RPS20P22-201ENST00000473700 357 ntBASIC1.97□□□□□ -2.09
UPK1AO00322 AC104563.1-201ENST00000476147 376 ntBASIC1.97□□□□□ -2.09
UPK1AO00322 AC008413.1-201ENST00000511864 177 ntBASIC1.97□□□□□ -2.09
UPK1AO00322 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC1.97□□□□□ -2.09
UPK1AO00322 RNU1-40P-201ENST00000516816 164 ntBASIC1.97□□□□□ -2.09
UPK1AO00322 RNU1-97P-201ENST00000516872 164 ntBASIC1.97□□□□□ -2.09
UPK1AO00322 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC1.97□□□□□ -2.09
UPK1AO00322 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC1.97□□□□□ -2.09
UPK1AO00322 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC1.97□□□□□ -2.09
UPK1AO00322 AP002770.2-201ENST00000543613 532 ntBASIC1.97□□□□□ -2.09
UPK1AO00322 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC1.97□□□□□ -2.09
UPK1AO00322 OR4K7P-201ENST00000580232 945 ntBASIC1.97□□□□□ -2.09
UPK1AO00322 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC1.97□□□□□ -2.09
UPK1AO00322 AC024060.1-201ENST00000607052 494 ntBASIC1.97□□□□□ -2.09
UPK1AO00322 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC1.97□□□□□ -2.09
UPK1AO00322 MIR6840-201ENST00000611937 71 ntBASIC1.97□□□□□ -2.09
UPK1AO00322 AL590808.1-201ENST00000618696 141 ntBASIC1.97□□□□□ -2.09
UPK1AO00322 MIR6873-201ENST00000622788 63 ntBASIC1.97□□□□□ -2.09
UPK1AO00322 AC104985.3-201ENST00000623479 597 ntBASIC1.97□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms