Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC3.04□□□□□ -1.92
CCDC188H7C350 AC019097.1-201ENST00000424783 735 ntBASIC3.04□□□□□ -1.92
CCDC188H7C350 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.04□□□□□ -1.92
CCDC188H7C350 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
CCDC188H7C350 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.04□□□□□ -1.92
CCDC188H7C350 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC3.04□□□□□ -1.92
CCDC188H7C350 AC093156.1-201ENST00000440382 670 ntBASIC3.04□□□□□ -1.92
CCDC188H7C350 MTND4P25-201ENST00000441039 533 ntBASIC3.04□□□□□ -1.92
CCDC188H7C350 USP9YP15-201ENST00000442391 422 ntBASIC3.04□□□□□ -1.92
CCDC188H7C350 COX6CP12-201ENST00000446748 202 ntBASIC3.04□□□□□ -1.92
CCDC188H7C350 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC3.04□□□□□ -1.92
CCDC188H7C350 SNORD97-201ENST00000459187 142 ntBASIC3.04□□□□□ -1.92
CCDC188H7C350 AC117440.1-201ENST00000474107 571 ntBASIC3.04□□□□□ -1.92
CCDC188H7C350 RBM43P1-201ENST00000476891 1081 ntBASIC3.04□□□□□ -1.92
CCDC188H7C350 RN7SL432P-201ENST00000484057 298 ntBASIC3.04□□□□□ -1.92
CCDC188H7C350 RPL9P33-201ENST00000484311 566 ntBASIC3.04□□□□□ -1.92
CCDC188H7C350 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC3.04□□□□□ -1.92
CCDC188H7C350 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC3.04□□□□□ -1.92
CCDC188H7C350 AC128657.1-201ENST00000549459 145 ntBASIC3.04□□□□□ -1.92
CCDC188H7C350 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.04□□□□□ -1.92
CCDC188H7C350 MIR548AB-201ENST00000584917 84 ntBASIC3.04□□□□□ -1.92
CCDC188H7C350 AL670379.6-201ENST00000603753 252 ntBASIC3.04□□□□□ -1.92
CCDC188H7C350 AL670379.11-201ENST00000604059 253 ntBASIC3.04□□□□□ -1.92
CCDC188H7C350 AC112191.3-201ENST00000604371 277 ntBASIC3.04□□□□□ -1.92
CCDC188H7C350 AC008162.1-201ENST00000604718 254 ntBASIC3.04□□□□□ -1.92
CCDC188H7C350 AL670379.1-201ENST00000604752 252 ntBASIC3.04□□□□□ -1.92
CCDC188H7C350 AL670379.5-201ENST00000605253 252 ntBASIC3.04□□□□□ -1.92
CCDC188H7C350 AL670379.12-201ENST00000605291 253 ntBASIC3.04□□□□□ -1.92
CCDC188H7C350 AL670379.8-201ENST00000605353 252 ntBASIC3.04□□□□□ -1.92
CCDC188H7C350 AL670379.7-201ENST00000605823 252 ntBASIC3.04□□□□□ -1.92
CCDC188H7C350 AC239868.4-201ENST00000608318 671 ntBASIC3.04□□□□□ -1.92
CCDC188H7C350 AC096577.2-201ENST00000611455 153 ntBASIC3.04□□□□□ -1.92
CCDC188H7C350 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
CCDC188H7C350 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.04□□□□□ -1.92
CCDC188H7C350 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
CCDC188H7C350 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.03□□□□□ -1.92
CCDC188H7C350 ANKRD18EP-201ENST00000405487 2632 ntBASIC3.03□□□□□ -1.92
CCDC188H7C350 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
CCDC188H7C350 FTLP6-201ENST00000355274 422 ntBASIC3.03□□□□□ -1.92
CCDC188H7C350 RNU6-217P-201ENST00000384164 104 ntBASIC3.03□□□□□ -1.92
CCDC188H7C350 Y_RNA.608-201ENST00000410647 95 ntBASIC3.03□□□□□ -1.92
CCDC188H7C350 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC3.03□□□□□ -1.92
CCDC188H7C350 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC3.03□□□□□ -1.92
CCDC188H7C350 LAMTOR5P1-201ENST00000444290 270 ntBASIC3.03□□□□□ -1.92
CCDC188H7C350 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC3.03□□□□□ -1.92
CCDC188H7C350 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.03□□□□□ -1.92
CCDC188H7C350 RPL26P9-201ENST00000457466 433 ntBASIC3.03□□□□□ -1.92
CCDC188H7C350 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC3.03□□□□□ -1.92
CCDC188H7C350 RN7SL499P-201ENST00000481141 276 ntBASIC3.03□□□□□ -1.92
CCDC188H7C350 RN7SL297P-201ENST00000483161 293 ntBASIC3.03□□□□□ -1.92
CCDC188H7C350 SNORA9.3-201ENST00000516383 129 ntBASIC3.03□□□□□ -1.92
CCDC188H7C350 SNORA74D-201ENST00000516404 141 ntBASIC3.03□□□□□ -1.92
CCDC188H7C350 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC3.03□□□□□ -1.92
CCDC188H7C350 AC107934.1-201ENST00000522215 217 ntBASIC3.03□□□□□ -1.92
CCDC188H7C350 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC3.03□□□□□ -1.92
CCDC188H7C350 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC3.03□□□□□ -1.92
CCDC188H7C350 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC3.03□□□□□ -1.92
CCDC188H7C350 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC3.03□□□□□ -1.92
CCDC188H7C350 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.03□□□□□ -1.92
CCDC188H7C350 U73023.1-201ENST00000603134 700 ntBASIC3.03□□□□□ -1.92
CCDC188H7C350 MTND4LP5-201ENST00000605152 292 ntBASIC3.03□□□□□ -1.92
CCDC188H7C350 AC091953.2-201ENST00000623979 160 ntBASIC3.03□□□□□ -1.92
CCDC188H7C350 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.03□□□□□ -1.92
CCDC188H7C350 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.03□□□□□ -1.93
CCDC188H7C350 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.93
CCDC188H7C350 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.02□□□□□ -1.93
CCDC188H7C350 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
CCDC188H7C350 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.02□□□□□ -1.93
CCDC188H7C350 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
CCDC188H7C350 RNU6-1167P-201ENST00000363227 94 ntBASIC3.02□□□□□ -1.93
CCDC188H7C350 SNORA9.2-201ENST00000365361 133 ntBASIC3.02□□□□□ -1.93
CCDC188H7C350 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
CCDC188H7C350 MIR491-201ENST00000384877 84 ntBASIC3.02□□□□□ -1.93
CCDC188H7C350 CASP3-203ENST00000393588 677 ntTSL 4 BASIC3.02□□□□□ -1.93
CCDC188H7C350 Y_RNA.598-201ENST00000410480 95 ntBASIC3.02□□□□□ -1.93
CCDC188H7C350 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC3.02□□□□□ -1.93
CCDC188H7C350 AC092047.1-201ENST00000424997 240 ntBASIC3.02□□□□□ -1.93
CCDC188H7C350 RPL7P46-201ENST00000425129 740 ntBASIC3.02□□□□□ -1.93
CCDC188H7C350 NEFMP1-201ENST00000443423 1006 ntBASIC3.02□□□□□ -1.93
CCDC188H7C350 CYCSP35-201ENST00000451978 304 ntBASIC3.02□□□□□ -1.93
CCDC188H7C350 BET1P1-201ENST00000482276 359 ntBASIC3.02□□□□□ -1.93
CCDC188H7C350 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC3.02□□□□□ -1.93
CCDC188H7C350 AC118465.1-201ENST00000513820 1271 ntBASIC3.02□□□□□ -1.93
CCDC188H7C350 SNORA70.24-201ENST00000517233 118 ntBASIC3.02□□□□□ -1.93
CCDC188H7C350 MTCO1P47-201ENST00000523889 1271 ntBASIC3.02□□□□□ -1.93
CCDC188H7C350 AC107016.2-201ENST00000547968 190 ntBASIC3.02□□□□□ -1.93
CCDC188H7C350 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.02□□□□□ -1.93
CCDC188H7C350 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC3.02□□□□□ -1.93
CCDC188H7C350 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
CCDC188H7C350 ABBA01006766.1-201ENST00000584728 294 ntBASIC3.02□□□□□ -1.93
CCDC188H7C350 AL355877.2-201ENST00000603670 358 ntBASIC3.02□□□□□ -1.93
CCDC188H7C350 RNU6-87P-201ENST00000607561 108 ntBASIC3.02□□□□□ -1.93
CCDC188H7C350 AC107294.1-201ENST00000609524 467 ntBASIC3.02□□□□□ -1.93
CCDC188H7C350 AC104010.1-201ENST00000616889 150 ntBASIC3.02□□□□□ -1.93
CCDC188H7C350 AC068880.5-201ENST00000624331 290 ntBASIC3.02□□□□□ -1.93
CCDC188H7C350 AC110079.1-202ENST00000635213 138 ntBASIC3.02□□□□□ -1.93
CCDC188H7C350 AC010733.2-201ENST00000589496 5702 ntBASIC3.02□□□□□ -1.93
CCDC188H7C350 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC3.02□□□□□ -1.93
CCDC188H7C350 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.02□□□□□ -1.93
CCDC188H7C350 API5P2-201ENST00000397055 1498 ntBASIC3.02□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 118.1 ms