Protein–RNA interactions for Protein: A6NIU2

LINC01549, Putative uncharacterized protein encoded by LINC01549, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01549A6NIU2 RPS6P15-201ENST00000431996 751 ntBASIC0.6□□□□□ -2.31
LINC01549A6NIU2 TRAPPC2P8-201ENST00000440676 396 ntBASIC0.6□□□□□ -2.31
LINC01549A6NIU2 TRAPPC2P3-201ENST00000443200 321 ntBASIC0.6□□□□□ -2.31
LINC01549A6NIU2 MTND6P13-201ENST00000443510 523 ntBASIC0.6□□□□□ -2.31
LINC01549A6NIU2 PRPS1P1-201ENST00000445305 876 ntBASIC0.6□□□□□ -2.31
LINC01549A6NIU2 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC0.6□□□□□ -2.31
LINC01549A6NIU2 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC0.6□□□□□ -2.31
LINC01549A6NIU2 HMGN2P23-201ENST00000456759 269 ntBASIC0.6□□□□□ -2.31
LINC01549A6NIU2 RNU7-23P-201ENST00000459465 62 ntBASIC0.6□□□□□ -2.31
LINC01549A6NIU2 RPL30P5-201ENST00000494923 336 ntBASIC0.6□□□□□ -2.31
LINC01549A6NIU2 AC103851.1-201ENST00000506833 274 ntBASIC0.6□□□□□ -2.31
LINC01549A6NIU2 AC016065.2-201ENST00000514530 444 ntBASIC0.6□□□□□ -2.31
LINC01549A6NIU2 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC0.6□□□□□ -2.31
LINC01549A6NIU2 SCARNA17.1-201ENST00000516211 143 ntBASIC0.6□□□□□ -2.31
LINC01549A6NIU2 SCARNA17.2-201ENST00000516334 143 ntBASIC0.6□□□□□ -2.31
LINC01549A6NIU2 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC0.6□□□□□ -2.31
LINC01549A6NIU2 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC0.6□□□□□ -2.31
LINC01549A6NIU2 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC0.6□□□□□ -2.31
LINC01549A6NIU2 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC0.6□□□□□ -2.31
LINC01549A6NIU2 AC135279.1-201ENST00000543493 504 ntBASIC0.6□□□□□ -2.31
LINC01549A6NIU2 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC0.6□□□□□ -2.31
LINC01549A6NIU2 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC0.6□□□□□ -2.31
LINC01549A6NIU2 AL133241.1-201ENST00000556832 487 ntBASIC0.6□□□□□ -2.31
LINC01549A6NIU2 HMGB1P14-201ENST00000557424 591 ntBASIC0.6□□□□□ -2.31
LINC01549A6NIU2 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC0.6□□□□□ -2.31
LINC01549A6NIU2 MTCO2P22-201ENST00000603246 681 ntBASIC0.6□□□□□ -2.31
LINC01549A6NIU2 AC123912.5-201ENST00000605470 343 ntBASIC0.6□□□□□ -2.31
LINC01549A6NIU2 SCARNA17.4-201ENST00000614296 143 ntBASIC0.6□□□□□ -2.31
LINC01549A6NIU2 AC106800.4-201ENST00000614905 153 ntBASIC0.6□□□□□ -2.31
LINC01549A6NIU2 RNU6-156P-201ENST00000621869 107 ntBASIC0.6□□□□□ -2.31
LINC01549A6NIU2 MIR6866-201ENST00000638146 69 ntBASIC0.6□□□□□ -2.31
LINC01549A6NIU2 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC0.6□□□□□ -2.31
LINC01549A6NIU2 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC0.59□□□□□ -2.31
LINC01549A6NIU2 U3.13-201ENST00000364804 214 ntBASIC0.59□□□□□ -2.31
LINC01549A6NIU2 RNU6-317P-201ENST00000384031 107 ntBASIC0.59□□□□□ -2.31
LINC01549A6NIU2 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC0.59□□□□□ -2.31
LINC01549A6NIU2 BTF3P4-201ENST00000418852 495 ntBASIC0.59□□□□□ -2.31
LINC01549A6NIU2 RPS4XP11-201ENST00000446897 772 ntBASIC0.59□□□□□ -2.31
LINC01549A6NIU2 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC0.59□□□□□ -2.31
LINC01549A6NIU2 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC0.59□□□□□ -2.31
LINC01549A6NIU2 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC0.59□□□□□ -2.31
LINC01549A6NIU2 AC117532.1-201ENST00000514638 323 ntBASIC0.59□□□□□ -2.31
LINC01549A6NIU2 MIR892C-201ENST00000516410 77 ntBASIC0.59□□□□□ -2.31
LINC01549A6NIU2 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC0.59□□□□□ -2.31
LINC01549A6NIU2 AL442163.2-201ENST00000553912 710 ntBASIC0.59□□□□□ -2.31
LINC01549A6NIU2 AL670379.6-201ENST00000603753 252 ntBASIC0.59□□□□□ -2.31
LINC01549A6NIU2 AL670379.11-201ENST00000604059 253 ntBASIC0.59□□□□□ -2.31
LINC01549A6NIU2 AL670379.10-201ENST00000604330 253 ntBASIC0.59□□□□□ -2.31
LINC01549A6NIU2 AC008162.1-201ENST00000604718 254 ntBASIC0.59□□□□□ -2.31
LINC01549A6NIU2 AL670379.1-201ENST00000604752 252 ntBASIC0.59□□□□□ -2.31
LINC01549A6NIU2 AL670379.2-201ENST00000604983 252 ntBASIC0.59□□□□□ -2.31
LINC01549A6NIU2 AL670379.5-201ENST00000605253 252 ntBASIC0.59□□□□□ -2.31
LINC01549A6NIU2 AL670379.4-201ENST00000605279 254 ntBASIC0.59□□□□□ -2.31
LINC01549A6NIU2 AL670379.12-201ENST00000605291 253 ntBASIC0.59□□□□□ -2.31
LINC01549A6NIU2 AL670379.8-201ENST00000605353 252 ntBASIC0.59□□□□□ -2.31
LINC01549A6NIU2 AL670379.9-201ENST00000605428 253 ntBASIC0.59□□□□□ -2.31
LINC01549A6NIU2 AL670379.7-201ENST00000605823 252 ntBASIC0.59□□□□□ -2.31
LINC01549A6NIU2 AC018638.7-201ENST00000605836 1114 ntBASIC0.59□□□□□ -2.31
LINC01549A6NIU2 AC008945.2-201ENST00000606056 604 ntBASIC0.59□□□□□ -2.31
LINC01549A6NIU2 AC239803.2-201ENST00000610161 430 ntBASIC0.59□□□□□ -2.31
LINC01549A6NIU2 AC025048.6-202ENST00000627667 438 ntBASIC0.59□□□□□ -2.31
LINC01549A6NIU2 AC092192.1-201ENST00000633154 1018 ntBASIC0.59□□□□□ -2.31
LINC01549A6NIU2 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC0.59□□□□□ -2.32
LINC01549A6NIU2 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC0.58□□□□□ -2.32
LINC01549A6NIU2 AC068700.1-201ENST00000565862 3754 ntBASIC0.58□□□□□ -2.32
LINC01549A6NIU2 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC0.58□□□□□ -2.32
LINC01549A6NIU2 CYCSP49-201ENST00000420810 319 ntBASIC0.58□□□□□ -2.32
LINC01549A6NIU2 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC0.58□□□□□ -2.32
LINC01549A6NIU2 GTF2IP20-201ENST00000431663 360 ntBASIC0.58□□□□□ -2.32
LINC01549A6NIU2 NDUFB4P6-201ENST00000436819 366 ntBASIC0.58□□□□□ -2.32
LINC01549A6NIU2 DNAJC19P8-201ENST00000452887 259 ntBASIC0.58□□□□□ -2.32
LINC01549A6NIU2 BX322784.1-201ENST00000455793 1077 ntBASIC0.58□□□□□ -2.32
LINC01549A6NIU2 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC0.58□□□□□ -2.32
LINC01549A6NIU2 AC093677.1-201ENST00000514414 678 ntBASIC0.58□□□□□ -2.32
LINC01549A6NIU2 RNA5SP137-201ENST00000516833 135 ntBASIC0.58□□□□□ -2.32
LINC01549A6NIU2 RNU6-548P-201ENST00000517083 115 ntBASIC0.58□□□□□ -2.32
LINC01549A6NIU2 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC0.58□□□□□ -2.32
LINC01549A6NIU2 MIR3126-201ENST00000577443 74 ntBASIC0.58□□□□□ -2.32
LINC01549A6NIU2 RN7SL371P-201ENST00000578099 267 ntBASIC0.58□□□□□ -2.32
LINC01549A6NIU2 AL157834.3-201ENST00000615543 103 ntBASIC0.58□□□□□ -2.32
LINC01549A6NIU2 U4atac.1-201ENST00000618345 95 ntBASIC0.58□□□□□ -2.32
LINC01549A6NIU2 AP003399.1-201ENST00000637534 361 ntBASIC0.58□□□□□ -2.32
LINC01549A6NIU2 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC0.58□□□□□ -2.32
LINC01549A6NIU2 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC0.57□□□□□ -2.32
LINC01549A6NIU2 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC0.57□□□□□ -2.32
LINC01549A6NIU2 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC0.57□□□□□ -2.32
LINC01549A6NIU2 RNU6-1222P-201ENST00000384615 107 ntBASIC0.57□□□□□ -2.32
LINC01549A6NIU2 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC0.57□□□□□ -2.32
LINC01549A6NIU2 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC0.57□□□□□ -2.32
LINC01549A6NIU2 AL606490.4-201ENST00000423117 127 ntBASIC0.57□□□□□ -2.32
LINC01549A6NIU2 AC234781.2-201ENST00000426370 994 ntBASIC0.57□□□□□ -2.32
LINC01549A6NIU2 RPL30P4-201ENST00000429309 333 ntBASIC0.57□□□□□ -2.32
LINC01549A6NIU2 EZH2P1-201ENST00000431167 291 ntBASIC0.57□□□□□ -2.32
LINC01549A6NIU2 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC0.57□□□□□ -2.32
LINC01549A6NIU2 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC0.57□□□□□ -2.32
LINC01549A6NIU2 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC0.57□□□□□ -2.32
LINC01549A6NIU2 OR52A4P-202ENST00000481634 799 ntBASIC0.57□□□□□ -2.32
LINC01549A6NIU2 AC109927.2-201ENST00000506416 303 ntBASIC0.57□□□□□ -2.32
LINC01549A6NIU2 AC074051.3-201ENST00000570238 358 ntBASIC0.57□□□□□ -2.32
LINC01549A6NIU2 MIR4303-201ENST00000581299 66 ntBASIC0.57□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 146.6 ms