Protein–RNA interactions for Protein: A0A0B4J268

TRAV4, T-cell receptor alpha variable 4 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV4A0A0B4J268 RNA5SP160-201ENST00000364866 120 ntBASIC1.45□□□□□ -2.18
TRAV4A0A0B4J268 USP9YP19-201ENST00000412165 485 ntBASIC1.45□□□□□ -2.18
TRAV4A0A0B4J268 USP9YP13-201ENST00000417797 480 ntBASIC1.45□□□□□ -2.18
TRAV4A0A0B4J268 SFR1P2-201ENST00000421841 730 ntBASIC1.45□□□□□ -2.18
TRAV4A0A0B4J268 RPL31P63-201ENST00000422565 375 ntBASIC1.45□□□□□ -2.18
TRAV4A0A0B4J268 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC1.45□□□□□ -2.18
TRAV4A0A0B4J268 MTND4LP7-201ENST00000431728 294 ntBASIC1.45□□□□□ -2.18
TRAV4A0A0B4J268 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC1.45□□□□□ -2.18
TRAV4A0A0B4J268 GTF2IP7-202ENST00000436677 309 ntBASIC1.45□□□□□ -2.18
TRAV4A0A0B4J268 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
TRAV4A0A0B4J268 AC098831.1-201ENST00000440661 216 ntBASIC1.45□□□□□ -2.18
TRAV4A0A0B4J268 RNFT1P2-201ENST00000443064 757 ntBASIC1.45□□□□□ -2.18
TRAV4A0A0B4J268 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC1.45□□□□□ -2.18
TRAV4A0A0B4J268 RPL7P36-201ENST00000444633 681 ntBASIC1.45□□□□□ -2.18
TRAV4A0A0B4J268 HMGN1P5-201ENST00000448591 263 ntBASIC1.45□□□□□ -2.18
TRAV4A0A0B4J268 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.45□□□□□ -2.18
TRAV4A0A0B4J268 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC1.45□□□□□ -2.18
TRAV4A0A0B4J268 ATG12P2-201ENST00000456830 416 ntBASIC1.45□□□□□ -2.18
TRAV4A0A0B4J268 RPS20P22-201ENST00000473700 357 ntBASIC1.45□□□□□ -2.18
TRAV4A0A0B4J268 RPL21P47-201ENST00000483696 477 ntBASIC1.45□□□□□ -2.18
TRAV4A0A0B4J268 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC1.45□□□□□ -2.18
TRAV4A0A0B4J268 AC010486.1-201ENST00000511793 424 ntBASIC1.45□□□□□ -2.18
TRAV4A0A0B4J268 NACAP3-201ENST00000552100 481 ntBASIC1.45□□□□□ -2.18
TRAV4A0A0B4J268 AC067805.1-201ENST00000559344 470 ntBASIC1.45□□□□□ -2.18
TRAV4A0A0B4J268 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
TRAV4A0A0B4J268 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC1.45□□□□□ -2.18
TRAV4A0A0B4J268 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC1.45□□□□□ -2.18
TRAV4A0A0B4J268 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC1.45□□□□□ -2.18
TRAV4A0A0B4J268 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC1.45□□□□□ -2.18
TRAV4A0A0B4J268 AC091946.2-201ENST00000606105 291 ntBASIC1.45□□□□□ -2.18
TRAV4A0A0B4J268 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC1.45□□□□□ -2.18
TRAV4A0A0B4J268 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
TRAV4A0A0B4J268 AC110491.1-201ENST00000562191 2010 ntBASIC1.45□□□□□ -2.18
TRAV4A0A0B4J268 ELF2P3-201ENST00000445099 1506 ntBASIC1.45□□□□□ -2.18
TRAV4A0A0B4J268 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC1.45□□□□□ -2.18
TRAV4A0A0B4J268 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.44□□□□□ -2.18
TRAV4A0A0B4J268 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.44□□□□□ -2.18
TRAV4A0A0B4J268 AC092881.1-201ENST00000638218 2733 ntBASIC1.44□□□□□ -2.18
TRAV4A0A0B4J268 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC1.44□□□□□ -2.18
TRAV4A0A0B4J268 RNA5SP276-201ENST00000362580 94 ntBASIC1.44□□□□□ -2.18
TRAV4A0A0B4J268 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC1.44□□□□□ -2.18
TRAV4A0A0B4J268 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
TRAV4A0A0B4J268 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
TRAV4A0A0B4J268 RPL17P12-201ENST00000413391 526 ntBASIC1.44□□□□□ -2.18
TRAV4A0A0B4J268 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC1.44□□□□□ -2.18
TRAV4A0A0B4J268 RPS24P7-201ENST00000416921 246 ntBASIC1.44□□□□□ -2.18
TRAV4A0A0B4J268 MTATP6P27-201ENST00000416987 621 ntBASIC1.44□□□□□ -2.18
TRAV4A0A0B4J268 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC1.44□□□□□ -2.18
TRAV4A0A0B4J268 AC096920.1-201ENST00000423991 241 ntBASIC1.44□□□□□ -2.18
TRAV4A0A0B4J268 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC1.44□□□□□ -2.18
TRAV4A0A0B4J268 BLOC1S2P1-201ENST00000428431 301 ntBASIC1.44□□□□□ -2.18
TRAV4A0A0B4J268 FABP5P14-201ENST00000437273 393 ntBASIC1.44□□□□□ -2.18
TRAV4A0A0B4J268 AL451074.3-201ENST00000437709 472 ntBASIC1.44□□□□□ -2.18
TRAV4A0A0B4J268 TRBV25OR9-2-201ENST00000438417 374 ntBASIC1.44□□□□□ -2.18
TRAV4A0A0B4J268 AC092393.1-201ENST00000439625 742 ntBASIC1.44□□□□□ -2.18
TRAV4A0A0B4J268 USP9YP8-201ENST00000441913 500 ntBASIC1.44□□□□□ -2.18
TRAV4A0A0B4J268 AC096638.1-201ENST00000444678 216 ntBASIC1.44□□□□□ -2.18
TRAV4A0A0B4J268 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC1.44□□□□□ -2.18
TRAV4A0A0B4J268 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC1.44□□□□□ -2.18
TRAV4A0A0B4J268 RPL23AP6-201ENST00000446637 472 ntBASIC1.44□□□□□ -2.18
TRAV4A0A0B4J268 AL136380.1-201ENST00000447970 162 ntBASIC1.44□□□□□ -2.18
TRAV4A0A0B4J268 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC1.44□□□□□ -2.18
TRAV4A0A0B4J268 AL353705.4-201ENST00000449661 238 ntBASIC1.44□□□□□ -2.18
TRAV4A0A0B4J268 TRBV1-201ENST00000476502 284 ntBASIC1.44□□□□□ -2.18
TRAV4A0A0B4J268 AC108729.2-201ENST00000476543 840 ntBASIC1.44□□□□□ -2.18
TRAV4A0A0B4J268 AC091860.1-201ENST00000505723 432 ntBASIC1.44□□□□□ -2.18
TRAV4A0A0B4J268 AC096571.1-202ENST00000506634 735 ntBASIC1.44□□□□□ -2.18
TRAV4A0A0B4J268 AC010460.2-201ENST00000509054 677 ntBASIC1.44□□□□□ -2.18
TRAV4A0A0B4J268 AC091965.2-201ENST00000512324 613 ntBASIC1.44□□□□□ -2.18
TRAV4A0A0B4J268 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC1.44□□□□□ -2.18
TRAV4A0A0B4J268 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC1.44□□□□□ -2.18
TRAV4A0A0B4J268 MIR3122-201ENST00000577243 73 ntBASIC1.44□□□□□ -2.18
TRAV4A0A0B4J268 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC1.44□□□□□ -2.18
TRAV4A0A0B4J268 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
TRAV4A0A0B4J268 AP001269.3-201ENST00000588718 329 ntBASIC1.44□□□□□ -2.18
TRAV4A0A0B4J268 AL355297.2-201ENST00000604792 129 ntBASIC1.44□□□□□ -2.18
TRAV4A0A0B4J268 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC1.44□□□□□ -2.18
TRAV4A0A0B4J268 AC016911.1-201ENST00000613297 452 ntBASIC1.44□□□□□ -2.18
TRAV4A0A0B4J268 AL590808.1-201ENST00000618696 141 ntBASIC1.44□□□□□ -2.18
TRAV4A0A0B4J268 AL356266.1-201ENST00000623311 483 ntBASIC1.44□□□□□ -2.18
TRAV4A0A0B4J268 MIR3199-2-201ENST00000636243 86 ntBASIC1.44□□□□□ -2.18
TRAV4A0A0B4J268 MIR219B-201ENST00000637023 88 ntBASIC1.44□□□□□ -2.18
TRAV4A0A0B4J268 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
TRAV4A0A0B4J268 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC1.43□□□□□ -2.18
TRAV4A0A0B4J268 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.43□□□□□ -2.18
TRAV4A0A0B4J268 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
TRAV4A0A0B4J268 RNU6-486P-201ENST00000363116 107 ntBASIC1.43□□□□□ -2.18
TRAV4A0A0B4J268 XGY1-201ENST00000381172 446 ntBASIC1.43□□□□□ -2.18
TRAV4A0A0B4J268 AL356421.1-201ENST00000403255 413 ntBASIC1.43□□□□□ -2.18
TRAV4A0A0B4J268 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.43□□□□□ -2.18
TRAV4A0A0B4J268 RNA5SP508-201ENST00000411327 119 ntBASIC1.43□□□□□ -2.18
TRAV4A0A0B4J268 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC1.43□□□□□ -2.18
TRAV4A0A0B4J268 NDUFS5P4-201ENST00000412983 318 ntBASIC1.43□□□□□ -2.18
TRAV4A0A0B4J268 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC1.43□□□□□ -2.18
TRAV4A0A0B4J268 DPH3P2-201ENST00000422618 250 ntBASIC1.43□□□□□ -2.18
TRAV4A0A0B4J268 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.43□□□□□ -2.18
TRAV4A0A0B4J268 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC1.43□□□□□ -2.18
TRAV4A0A0B4J268 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC1.43□□□□□ -2.18
TRAV4A0A0B4J268 AC005297.2-201ENST00000450430 606 ntBASIC1.43□□□□□ -2.18
TRAV4A0A0B4J268 MTND3P4-201ENST00000453537 303 ntBASIC1.43□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms