Protein–RNA interactions for Protein: A0A0B4J238

TRAV1-2, T-cell receptor alpha variable 1-2 (Fragment), humanhuman

Predictions only

Length 106 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-2A0A0B4J238 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC0.98□□□□□ -2.25
TRAV1-2A0A0B4J238 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC0.98□□□□□ -2.25
TRAV1-2A0A0B4J238 DEFB108F-201ENST00000344638 222 ntBASIC0.98□□□□□ -2.25
TRAV1-2A0A0B4J238 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC0.98□□□□□ -2.25
TRAV1-2A0A0B4J238 RNA5SP276-201ENST00000362580 94 ntBASIC0.98□□□□□ -2.25
TRAV1-2A0A0B4J238 RNU6-19P-201ENST00000384718 107 ntBASIC0.98□□□□□ -2.25
TRAV1-2A0A0B4J238 UBE2V1P9-201ENST00000414760 368 ntBASIC0.98□□□□□ -2.25
TRAV1-2A0A0B4J238 OR6C66P-201ENST00000414917 930 ntBASIC0.98□□□□□ -2.25
TRAV1-2A0A0B4J238 AC003685.2-201ENST00000422795 395 ntBASIC0.98□□□□□ -2.25
TRAV1-2A0A0B4J238 RPL23AP76-201ENST00000441860 458 ntBASIC0.98□□□□□ -2.25
TRAV1-2A0A0B4J238 RPL21P134-201ENST00000453468 483 ntBASIC0.98□□□□□ -2.25
TRAV1-2A0A0B4J238 AC025181.1-201ENST00000477507 416 ntBASIC0.98□□□□□ -2.25
TRAV1-2A0A0B4J238 AC107032.1-201ENST00000485945 480 ntBASIC0.98□□□□□ -2.25
TRAV1-2A0A0B4J238 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC0.98□□□□□ -2.25
TRAV1-2A0A0B4J238 AC112518.2-201ENST00000508565 425 ntBASIC0.98□□□□□ -2.25
TRAV1-2A0A0B4J238 AC093770.1-201ENST00000511559 571 ntBASIC0.98□□□□□ -2.25
TRAV1-2A0A0B4J238 AC091965.2-201ENST00000512324 613 ntBASIC0.98□□□□□ -2.25
TRAV1-2A0A0B4J238 RNU6ATAC13P-201ENST00000516152 131 ntBASIC0.98□□□□□ -2.25
TRAV1-2A0A0B4J238 RNU6-1282P-201ENST00000516735 96 ntBASIC0.98□□□□□ -2.25
TRAV1-2A0A0B4J238 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC0.98□□□□□ -2.25
TRAV1-2A0A0B4J238 DEFB108D-201ENST00000527787 222 ntBASIC0.98□□□□□ -2.25
TRAV1-2A0A0B4J238 EEF1B2P4-201ENST00000551398 348 ntBASIC0.98□□□□□ -2.25
TRAV1-2A0A0B4J238 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC0.98□□□□□ -2.25
TRAV1-2A0A0B4J238 AC011611.5-201ENST00000552477 578 ntBASIC0.98□□□□□ -2.25
TRAV1-2A0A0B4J238 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC0.98□□□□□ -2.25
TRAV1-2A0A0B4J238 MTCYBP27-201ENST00000555160 670 ntBASIC0.98□□□□□ -2.25
TRAV1-2A0A0B4J238 MIR3921-201ENST00000577308 85 ntBASIC0.98□□□□□ -2.25
TRAV1-2A0A0B4J238 MIR4529-201ENST00000578110 78 ntBASIC0.98□□□□□ -2.25
TRAV1-2A0A0B4J238 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC0.98□□□□□ -2.25
TRAV1-2A0A0B4J238 AC103810.9-201ENST00000606688 112 ntBASIC0.98□□□□□ -2.25
TRAV1-2A0A0B4J238 AC011374.2-201ENST00000607135 526 ntBASIC0.98□□□□□ -2.25
TRAV1-2A0A0B4J238 AL445493.3-201ENST00000619568 477 ntBASIC0.98□□□□□ -2.25
TRAV1-2A0A0B4J238 OR5H6-203ENST00000642105 978 ntBASIC0.98□□□□□ -2.25
TRAV1-2A0A0B4J238 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.98□□□□□ -2.25
TRAV1-2A0A0B4J238 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC0.98□□□□□ -2.25
TRAV1-2A0A0B4J238 ZNF736P3Y-201ENST00000428264 1465 ntBASIC0.98□□□□□ -2.25
TRAV1-2A0A0B4J238 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC0.98□□□□□ -2.25
TRAV1-2A0A0B4J238 AP000560.1-201ENST00000624150 1937 ntBASIC0.97□□□□□ -2.25
TRAV1-2A0A0B4J238 RNU6-673P-201ENST00000365084 104 ntBASIC0.97□□□□□ -2.25
TRAV1-2A0A0B4J238 MIR513A1-201ENST00000385138 129 ntBASIC0.97□□□□□ -2.25
TRAV1-2A0A0B4J238 MIR147B-201ENST00000390185 80 ntBASIC0.97□□□□□ -2.25
TRAV1-2A0A0B4J238 RPS7P9-201ENST00000414704 586 ntBASIC0.97□□□□□ -2.25
TRAV1-2A0A0B4J238 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC0.97□□□□□ -2.25
TRAV1-2A0A0B4J238 AL035410.1-201ENST00000427409 427 ntBASIC0.97□□□□□ -2.25
TRAV1-2A0A0B4J238 HMGB1P9-201ENST00000429856 646 ntBASIC0.97□□□□□ -2.25
TRAV1-2A0A0B4J238 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC0.97□□□□□ -2.25
TRAV1-2A0A0B4J238 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC0.97□□□□□ -2.25
TRAV1-2A0A0B4J238 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC0.97□□□□□ -2.25
TRAV1-2A0A0B4J238 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC0.97□□□□□ -2.25
TRAV1-2A0A0B4J238 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC0.97□□□□□ -2.25
TRAV1-2A0A0B4J238 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC0.97□□□□□ -2.25
TRAV1-2A0A0B4J238 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC0.97□□□□□ -2.25
TRAV1-2A0A0B4J238 AL049714.1-201ENST00000466686 347 ntBASIC0.97□□□□□ -2.25
TRAV1-2A0A0B4J238 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC0.97□□□□□ -2.25
TRAV1-2A0A0B4J238 AL359273.1-201ENST00000510918 627 ntBASIC0.97□□□□□ -2.25
TRAV1-2A0A0B4J238 AC008837.1-201ENST00000511513 412 ntBASIC0.97□□□□□ -2.25
TRAV1-2A0A0B4J238 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC0.97□□□□□ -2.25
TRAV1-2A0A0B4J238 RNU6-491P-201ENST00000516099 110 ntBASIC0.97□□□□□ -2.25
TRAV1-2A0A0B4J238 RNU1-92P-201ENST00000517017 135 ntBASIC0.97□□□□□ -2.25
TRAV1-2A0A0B4J238 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC0.97□□□□□ -2.25
TRAV1-2A0A0B4J238 AC084364.2-201ENST00000546924 395 ntBASIC0.97□□□□□ -2.25
TRAV1-2A0A0B4J238 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC0.97□□□□□ -2.25
TRAV1-2A0A0B4J238 AP001485.1-201ENST00000604799 199 ntBASIC0.97□□□□□ -2.25
TRAV1-2A0A0B4J238 AC079791.1-201ENST00000605356 973 ntBASIC0.97□□□□□ -2.25
TRAV1-2A0A0B4J238 AL773524.1-201ENST00000614065 229 ntBASIC0.97□□□□□ -2.25
TRAV1-2A0A0B4J238 AC090132.2-201ENST00000615881 347 ntBASIC0.97□□□□□ -2.25
TRAV1-2A0A0B4J238 AC068722.2-201ENST00000618734 544 ntBASIC0.97□□□□□ -2.25
TRAV1-2A0A0B4J238 AL109659.3-201ENST00000624985 950 ntBASIC0.97□□□□□ -2.25
TRAV1-2A0A0B4J238 AK9-203ENST00000368948 2478 ntTSL 5 BASIC0.97□□□□□ -2.25
TRAV1-2A0A0B4J238 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC0.97□□□□□ -2.25
TRAV1-2A0A0B4J238 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC0.97□□□□□ -2.25
TRAV1-2A0A0B4J238 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.96□□□□□ -2.26
TRAV1-2A0A0B4J238 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC0.96□□□□□ -2.26
TRAV1-2A0A0B4J238 RNU6-1155P-201ENST00000363554 107 ntBASIC0.96□□□□□ -2.26
TRAV1-2A0A0B4J238 RNU4-91P-201ENST00000364778 135 ntBASIC0.96□□□□□ -2.26
TRAV1-2A0A0B4J238 RNU6-1151P-201ENST00000384684 107 ntBASIC0.96□□□□□ -2.26
TRAV1-2A0A0B4J238 MIR634-201ENST00000385208 97 ntBASIC0.96□□□□□ -2.26
TRAV1-2A0A0B4J238 RNU6-882P-201ENST00000391025 103 ntBASIC0.96□□□□□ -2.26
TRAV1-2A0A0B4J238 NPM1P10-201ENST00000398310 865 ntBASIC0.96□□□□□ -2.26
TRAV1-2A0A0B4J238 AL035405.1-201ENST00000400795 710 ntBASIC0.96□□□□□ -2.26
TRAV1-2A0A0B4J238 AL021407.1-201ENST00000404531 386 ntBASIC0.96□□□□□ -2.26
TRAV1-2A0A0B4J238 AL356432.1-201ENST00000405809 419 ntBASIC0.96□□□□□ -2.26
TRAV1-2A0A0B4J238 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC0.96□□□□□ -2.26
TRAV1-2A0A0B4J238 ATP6V0E1P3-201ENST00000420036 246 ntBASIC0.96□□□□□ -2.26
TRAV1-2A0A0B4J238 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC0.96□□□□□ -2.26
TRAV1-2A0A0B4J238 AC092648.1-201ENST00000425870 423 ntBASIC0.96□□□□□ -2.26
TRAV1-2A0A0B4J238 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC0.96□□□□□ -2.26
TRAV1-2A0A0B4J238 TAAR7P-201ENST00000436141 242 ntBASIC0.96□□□□□ -2.26
TRAV1-2A0A0B4J238 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC0.96□□□□□ -2.26
TRAV1-2A0A0B4J238 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC0.96□□□□□ -2.26
TRAV1-2A0A0B4J238 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC0.96□□□□□ -2.26
TRAV1-2A0A0B4J238 PABPC1P3-201ENST00000469174 459 ntBASIC0.96□□□□□ -2.26
TRAV1-2A0A0B4J238 AC015724.1-201ENST00000478577 156 ntBASIC0.96□□□□□ -2.26
TRAV1-2A0A0B4J238 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC0.96□□□□□ -2.26
TRAV1-2A0A0B4J238 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC0.96□□□□□ -2.26
TRAV1-2A0A0B4J238 AC104108.1-201ENST00000509930 412 ntBASIC0.96□□□□□ -2.26
TRAV1-2A0A0B4J238 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC0.96□□□□□ -2.26
TRAV1-2A0A0B4J238 AC022447.1-201ENST00000515358 464 ntBASIC0.96□□□□□ -2.26
TRAV1-2A0A0B4J238 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC0.96□□□□□ -2.26
TRAV1-2A0A0B4J238 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC0.96□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms