Protein–RNA interactions for Protein: Q9Y5Y9

SCN10A, Sodium channel protein type 10 subunit alpha, humanhuman

Predictions only

Length 1,956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10AQ9Y5Y9 TMSB4XP1-201ENST00000424567 135 ntBASIC1.78□□□□□ -2.12
SCN10AQ9Y5Y9 MORF4L1P7-201ENST00000426038 703 ntBASIC1.78□□□□□ -2.12
SCN10AQ9Y5Y9 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC1.78□□□□□ -2.12
SCN10AQ9Y5Y9 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC1.78□□□□□ -2.12
SCN10AQ9Y5Y9 AC092473.1-201ENST00000441098 221 ntBASIC1.78□□□□□ -2.12
SCN10AQ9Y5Y9 TPT1P14-201ENST00000448018 505 ntBASIC1.78□□□□□ -2.12
SCN10AQ9Y5Y9 AC092757.1-201ENST00000467293 467 ntBASIC1.78□□□□□ -2.12
SCN10AQ9Y5Y9 AC107626.1-201ENST00000471084 183 ntBASIC1.78□□□□□ -2.12
SCN10AQ9Y5Y9 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC1.78□□□□□ -2.12
SCN10AQ9Y5Y9 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC1.78□□□□□ -2.12
SCN10AQ9Y5Y9 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC1.78□□□□□ -2.12
SCN10AQ9Y5Y9 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC1.78□□□□□ -2.12
SCN10AQ9Y5Y9 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC1.78□□□□□ -2.12
SCN10AQ9Y5Y9 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC1.78□□□□□ -2.12
SCN10AQ9Y5Y9 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC1.78□□□□□ -2.12
SCN10AQ9Y5Y9 BX248123.2-201ENST00000606318 124 ntBASIC1.78□□□□□ -2.12
SCN10AQ9Y5Y9 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC1.78□□□□□ -2.12
SCN10AQ9Y5Y9 uc_338.5-201ENST00000611839 155 ntBASIC1.78□□□□□ -2.12
SCN10AQ9Y5Y9 AC005332.10-201ENST00000612725 619 ntBASIC1.78□□□□□ -2.12
SCN10AQ9Y5Y9 AC006213.4-201ENST00000616184 634 ntBASIC1.78□□□□□ -2.12
SCN10AQ9Y5Y9 SNHG22-203ENST00000617833 660 ntBASIC1.78□□□□□ -2.12
SCN10AQ9Y5Y9 AC011330.2-201ENST00000621680 635 ntBASIC1.78□□□□□ -2.12
SCN10AQ9Y5Y9 AC012640.5-201ENST00000623897 319 ntBASIC1.78□□□□□ -2.12
SCN10AQ9Y5Y9 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC1.78□□□□□ -2.12
SCN10AQ9Y5Y9 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.78□□□□□ -2.12
SCN10AQ9Y5Y9 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.13
SCN10AQ9Y5Y9 RNA5SP489-201ENST00000410986 109 ntBASIC1.78□□□□□ -2.13
SCN10AQ9Y5Y9 AC099548.1-201ENST00000421443 426 ntBASIC1.78□□□□□ -2.13
SCN10AQ9Y5Y9 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC1.78□□□□□ -2.13
SCN10AQ9Y5Y9 AL714022.1-201ENST00000439897 151 ntBASIC1.78□□□□□ -2.13
SCN10AQ9Y5Y9 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.78□□□□□ -2.13
SCN10AQ9Y5Y9 OSTCP8-201ENST00000445117 448 ntBASIC1.78□□□□□ -2.13
SCN10AQ9Y5Y9 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC1.78□□□□□ -2.13
SCN10AQ9Y5Y9 RPL32P14-201ENST00000463196 378 ntBASIC1.78□□□□□ -2.13
SCN10AQ9Y5Y9 AC116337.2-201ENST00000477662 156 ntBASIC1.78□□□□□ -2.13
SCN10AQ9Y5Y9 OR9N1P-202ENST00000494289 481 ntBASIC1.78□□□□□ -2.13
SCN10AQ9Y5Y9 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC1.78□□□□□ -2.13
SCN10AQ9Y5Y9 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC1.78□□□□□ -2.13
SCN10AQ9Y5Y9 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC1.78□□□□□ -2.13
SCN10AQ9Y5Y9 AC087808.1-201ENST00000520501 361 ntBASIC1.78□□□□□ -2.13
SCN10AQ9Y5Y9 SUB1P1-201ENST00000524415 382 ntBASIC1.78□□□□□ -2.13
SCN10AQ9Y5Y9 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC1.78□□□□□ -2.13
SCN10AQ9Y5Y9 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC1.78□□□□□ -2.13
SCN10AQ9Y5Y9 AC015688.2-201ENST00000584523 262 ntBASIC1.78□□□□□ -2.13
SCN10AQ9Y5Y9 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC1.78□□□□□ -2.13
SCN10AQ9Y5Y9 GAS5-AS1-201ENST00000602767 694 ntBASIC1.78□□□□□ -2.13
SCN10AQ9Y5Y9 HPVC1-201ENST00000629899 1198 ntBASIC1.78□□□□□ -2.13
SCN10AQ9Y5Y9 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.77□□□□□ -2.13
SCN10AQ9Y5Y9 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC1.77□□□□□ -2.13
SCN10AQ9Y5Y9 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC1.77□□□□□ -2.13
SCN10AQ9Y5Y9 RNU6-461P-201ENST00000364195 107 ntBASIC1.77□□□□□ -2.13
SCN10AQ9Y5Y9 RNU6-392P-201ENST00000364926 101 ntBASIC1.77□□□□□ -2.13
SCN10AQ9Y5Y9 RNU4-52P-201ENST00000384209 138 ntBASIC1.77□□□□□ -2.13
SCN10AQ9Y5Y9 AL589655.1-201ENST00000405398 482 ntBASIC1.77□□□□□ -2.13
SCN10AQ9Y5Y9 RPS3AP24-201ENST00000407896 734 ntBASIC1.77□□□□□ -2.13
SCN10AQ9Y5Y9 RNU2-47P-201ENST00000410649 186 ntBASIC1.77□□□□□ -2.13
SCN10AQ9Y5Y9 RNU6-920P-201ENST00000410926 92 ntBASIC1.77□□□□□ -2.13
SCN10AQ9Y5Y9 AC004965.1-201ENST00000413033 213 ntBASIC1.77□□□□□ -2.13
SCN10AQ9Y5Y9 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC1.77□□□□□ -2.13
SCN10AQ9Y5Y9 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
SCN10AQ9Y5Y9 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC1.77□□□□□ -2.13
SCN10AQ9Y5Y9 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC1.77□□□□□ -2.13
SCN10AQ9Y5Y9 RNU7-23P-201ENST00000459465 62 ntBASIC1.77□□□□□ -2.13
SCN10AQ9Y5Y9 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC1.77□□□□□ -2.13
SCN10AQ9Y5Y9 AC114786.4-201ENST00000508771 728 ntBASIC1.77□□□□□ -2.13
SCN10AQ9Y5Y9 AC114797.1-201ENST00000514003 728 ntBASIC1.77□□□□□ -2.13
SCN10AQ9Y5Y9 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC1.77□□□□□ -2.13
SCN10AQ9Y5Y9 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC1.77□□□□□ -2.13
SCN10AQ9Y5Y9 AC068135.2-201ENST00000569293 1028 ntBASIC1.77□□□□□ -2.13
SCN10AQ9Y5Y9 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
SCN10AQ9Y5Y9 MIR1290-201ENST00000408735 78 ntBASIC1.76□□□□□ -2.13
SCN10AQ9Y5Y9 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC1.76□□□□□ -2.13
SCN10AQ9Y5Y9 RPS15AP12-201ENST00000419498 388 ntBASIC1.76□□□□□ -2.13
SCN10AQ9Y5Y9 UBE2V2P3-201ENST00000433562 437 ntBASIC1.76□□□□□ -2.13
SCN10AQ9Y5Y9 MTCYBP45-201ENST00000435243 565 ntBASIC1.76□□□□□ -2.13
SCN10AQ9Y5Y9 AC092170.1-201ENST00000440211 356 ntBASIC1.76□□□□□ -2.13
SCN10AQ9Y5Y9 MTND4LP3-201ENST00000468320 276 ntBASIC1.76□□□□□ -2.13
SCN10AQ9Y5Y9 RPS15AP34-201ENST00000487776 387 ntBASIC1.76□□□□□ -2.13
SCN10AQ9Y5Y9 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC1.76□□□□□ -2.13
SCN10AQ9Y5Y9 SNORA31.18-201ENST00000517043 134 ntBASIC1.76□□□□□ -2.13
SCN10AQ9Y5Y9 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC1.76□□□□□ -2.13
SCN10AQ9Y5Y9 CYCSP26-201ENST00000534107 320 ntBASIC1.76□□□□□ -2.13
SCN10AQ9Y5Y9 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC1.76□□□□□ -2.13
SCN10AQ9Y5Y9 AC021749.1-201ENST00000604322 607 ntBASIC1.76□□□□□ -2.13
SCN10AQ9Y5Y9 HMGB1P24-202ENST00000615653 685 ntBASIC1.76□□□□□ -2.13
SCN10AQ9Y5Y9 AC091925.2-201ENST00000625059 256 ntBASIC1.76□□□□□ -2.13
SCN10AQ9Y5Y9 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC1.76□□□□□ -2.13
SCN10AQ9Y5Y9 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC1.76□□□□□ -2.13
SCN10AQ9Y5Y9 GDI2P1-201ENST00000429312 1336 ntBASIC1.76□□□□□ -2.13
SCN10AQ9Y5Y9 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC1.76□□□□□ -2.13
SCN10AQ9Y5Y9 DDX10P1-201ENST00000448545 1933 ntBASIC1.76□□□□□ -2.13
SCN10AQ9Y5Y9 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
SCN10AQ9Y5Y9 AL596028.1-201ENST00000326971 197 ntBASIC1.76□□□□□ -2.13
SCN10AQ9Y5Y9 SNORA38-201ENST00000363946 132 ntBASIC1.76□□□□□ -2.13
SCN10AQ9Y5Y9 RNU6-619P-201ENST00000365146 108 ntBASIC1.76□□□□□ -2.13
SCN10AQ9Y5Y9 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
SCN10AQ9Y5Y9 AL355497.1-201ENST00000406262 551 ntBASIC1.76□□□□□ -2.13
SCN10AQ9Y5Y9 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC1.76□□□□□ -2.13
SCN10AQ9Y5Y9 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC1.76□□□□□ -2.13
SCN10AQ9Y5Y9 RPS29P20-201ENST00000489592 171 ntBASIC1.76□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 212.4 ms