Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.48□□□□□ -1.85
SNX9Q9Y5X1 AC246785.4-201ENST00000605374 287 ntBASIC3.48□□□□□ -1.85
SNX9Q9Y5X1 AC055876.5-201ENST00000605667 259 ntBASIC3.48□□□□□ -1.85
SNX9Q9Y5X1 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.48□□□□□ -1.85
SNX9Q9Y5X1 U6atac.1-201ENST00000616025 117 ntBASIC3.48□□□□□ -1.85
SNX9Q9Y5X1 AL158209.2-201ENST00000619266 216 ntBASIC3.48□□□□□ -1.85
SNX9Q9Y5X1 AL360181.4-201ENST00000621752 134 ntBASIC3.48□□□□□ -1.85
SNX9Q9Y5X1 AL159972.1-201ENST00000625150 448 ntBASIC3.48□□□□□ -1.85
SNX9Q9Y5X1 AL157786.1-207ENST00000627771 695 ntBASIC3.48□□□□□ -1.85
SNX9Q9Y5X1 MIR3651-201ENST00000630427 90 ntBASIC3.48□□□□□ -1.85
SNX9Q9Y5X1 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
SNX9Q9Y5X1 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
SNX9Q9Y5X1 RNY4P16-201ENST00000364768 94 ntBASIC3.47□□□□□ -1.85
SNX9Q9Y5X1 CRP-202ENST00000368110 667 ntTSL 3 BASIC3.47□□□□□ -1.85
SNX9Q9Y5X1 MIR181A1-201ENST00000385026 110 ntBASIC3.47□□□□□ -1.85
SNX9Q9Y5X1 SNORA48.8-201ENST00000391324 134 ntBASIC3.47□□□□□ -1.85
SNX9Q9Y5X1 CALM2P3-201ENST00000400429 449 ntBASIC3.47□□□□□ -1.85
SNX9Q9Y5X1 AL591034.1-201ENST00000407447 340 ntBASIC3.47□□□□□ -1.85
SNX9Q9Y5X1 RNA5SP229-201ENST00000410809 99 ntBASIC3.47□□□□□ -1.85
SNX9Q9Y5X1 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC3.47□□□□□ -1.85
SNX9Q9Y5X1 MTCYBP5-201ENST00000423752 1135 ntBASIC3.47□□□□□ -1.85
SNX9Q9Y5X1 AC233728.2-201ENST00000425348 757 ntBASIC3.47□□□□□ -1.85
SNX9Q9Y5X1 USP9YP18-201ENST00000425912 695 ntBASIC3.47□□□□□ -1.85
SNX9Q9Y5X1 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.47□□□□□ -1.85
SNX9Q9Y5X1 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC3.47□□□□□ -1.85
SNX9Q9Y5X1 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC3.47□□□□□ -1.85
SNX9Q9Y5X1 MTND4LP10-201ENST00000435146 291 ntBASIC3.47□□□□□ -1.85
SNX9Q9Y5X1 TIMM9P1-201ENST00000436122 256 ntBASIC3.47□□□□□ -1.85
SNX9Q9Y5X1 CST9LP2-201ENST00000437612 320 ntBASIC3.47□□□□□ -1.85
SNX9Q9Y5X1 AL451074.3-201ENST00000437709 472 ntBASIC3.47□□□□□ -1.85
SNX9Q9Y5X1 RPS3AP12-201ENST00000443616 753 ntBASIC3.47□□□□□ -1.85
SNX9Q9Y5X1 RAC1P7-201ENST00000445367 377 ntBASIC3.47□□□□□ -1.85
SNX9Q9Y5X1 PSPHP1-201ENST00000450062 261 ntBASIC3.47□□□□□ -1.85
SNX9Q9Y5X1 RN7SL504P-201ENST00000494496 287 ntBASIC3.47□□□□□ -1.85
SNX9Q9Y5X1 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC3.47□□□□□ -1.85
SNX9Q9Y5X1 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.47□□□□□ -1.85
SNX9Q9Y5X1 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC3.47□□□□□ -1.85
SNX9Q9Y5X1 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC3.47□□□□□ -1.85
SNX9Q9Y5X1 SNORA70.24-201ENST00000517233 118 ntBASIC3.47□□□□□ -1.85
SNX9Q9Y5X1 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
SNX9Q9Y5X1 OR4T1P-201ENST00000554933 911 ntBASIC3.47□□□□□ -1.85
SNX9Q9Y5X1 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC3.47□□□□□ -1.85
SNX9Q9Y5X1 MIR4801-201ENST00000582704 82 ntBASIC3.47□□□□□ -1.85
SNX9Q9Y5X1 AC068790.3-201ENST00000602988 553 ntBASIC3.47□□□□□ -1.85
SNX9Q9Y5X1 AC121334.2-201ENST00000605387 271 ntBASIC3.47□□□□□ -1.85
SNX9Q9Y5X1 YPEL5P2-201ENST00000605553 359 ntBASIC3.47□□□□□ -1.85
SNX9Q9Y5X1 AC112204.3-201ENST00000623822 332 ntBASIC3.47□□□□□ -1.85
SNX9Q9Y5X1 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.47□□□□□ -1.85
SNX9Q9Y5X1 AL079305.1-201ENST00000623159 3008 ntBASIC3.47□□□□□ -1.85
SNX9Q9Y5X1 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC3.47□□□□□ -1.85
SNX9Q9Y5X1 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.46□□□□□ -1.85
SNX9Q9Y5X1 ANKRD36BP1-202ENST00000604892 1417 ntBASIC3.46□□□□□ -1.86
SNX9Q9Y5X1 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
SNX9Q9Y5X1 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.46□□□□□ -1.86
SNX9Q9Y5X1 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
SNX9Q9Y5X1 RNU6-1283P-201ENST00000365314 105 ntBASIC3.46□□□□□ -1.86
SNX9Q9Y5X1 RNU6-169P-201ENST00000365336 107 ntBASIC3.46□□□□□ -1.86
SNX9Q9Y5X1 MTCO3P40-201ENST00000392516 676 ntBASIC3.46□□□□□ -1.86
SNX9Q9Y5X1 AC099677.1-201ENST00000420575 175 ntBASIC3.46□□□□□ -1.86
SNX9Q9Y5X1 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC3.46□□□□□ -1.86
SNX9Q9Y5X1 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC3.46□□□□□ -1.86
SNX9Q9Y5X1 HMGB3P11-201ENST00000440127 604 ntBASIC3.46□□□□□ -1.86
SNX9Q9Y5X1 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC3.46□□□□□ -1.86
SNX9Q9Y5X1 USP9YP15-201ENST00000442391 422 ntBASIC3.46□□□□□ -1.86
SNX9Q9Y5X1 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC3.46□□□□□ -1.86
SNX9Q9Y5X1 TPT1P14-201ENST00000448018 505 ntBASIC3.46□□□□□ -1.86
SNX9Q9Y5X1 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
SNX9Q9Y5X1 MTND1P9-201ENST00000453775 944 ntBASIC3.46□□□□□ -1.86
SNX9Q9Y5X1 AC013267.1-201ENST00000458227 267 ntBASIC3.46□□□□□ -1.86
SNX9Q9Y5X1 AC010401.1-201ENST00000463867 348 ntBASIC3.46□□□□□ -1.86
SNX9Q9Y5X1 ST13P14-201ENST00000474095 734 ntBASIC3.46□□□□□ -1.86
SNX9Q9Y5X1 AC019235.1-201ENST00000503847 207 ntBASIC3.46□□□□□ -1.86
SNX9Q9Y5X1 ARL4AP2-201ENST00000507378 601 ntBASIC3.46□□□□□ -1.86
SNX9Q9Y5X1 RNU6-1095P-201ENST00000516148 108 ntBASIC3.46□□□□□ -1.86
SNX9Q9Y5X1 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC3.46□□□□□ -1.86
SNX9Q9Y5X1 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC3.46□□□□□ -1.86
SNX9Q9Y5X1 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.46□□□□□ -1.86
SNX9Q9Y5X1 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.46□□□□□ -1.86
SNX9Q9Y5X1 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.46□□□□□ -1.86
SNX9Q9Y5X1 AP001429.1-201ENST00000602568 530 ntBASIC3.46□□□□□ -1.86
SNX9Q9Y5X1 AL391646.1-201ENST00000603860 190 ntBASIC3.46□□□□□ -1.86
SNX9Q9Y5X1 AC011451.2-201ENST00000604303 598 ntBASIC3.46□□□□□ -1.86
SNX9Q9Y5X1 AL110115.1-201ENST00000614396 364 ntBASIC3.46□□□□□ -1.86
SNX9Q9Y5X1 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
SNX9Q9Y5X1 AC073534.2-201ENST00000620377 381 ntBASIC3.46□□□□□ -1.86
SNX9Q9Y5X1 MIR6863-201ENST00000636112 90 ntBASIC3.46□□□□□ -1.86
SNX9Q9Y5X1 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.46□□□□□ -1.86
SNX9Q9Y5X1 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC3.46□□□□□ -1.86
SNX9Q9Y5X1 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
SNX9Q9Y5X1 RNU6-181P-201ENST00000363225 107 ntBASIC3.45□□□□□ -1.86
SNX9Q9Y5X1 Y_RNA.296-201ENST00000364930 108 ntBASIC3.45□□□□□ -1.86
SNX9Q9Y5X1 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC3.45□□□□□ -1.86
SNX9Q9Y5X1 MIR135A2-201ENST00000384854 100 ntBASIC3.45□□□□□ -1.86
SNX9Q9Y5X1 MIR491-201ENST00000384877 84 ntBASIC3.45□□□□□ -1.86
SNX9Q9Y5X1 MRPL42P2-201ENST00000403169 426 ntBASIC3.45□□□□□ -1.86
SNX9Q9Y5X1 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
SNX9Q9Y5X1 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.45□□□□□ -1.86
SNX9Q9Y5X1 RNU6-712P-201ENST00000410558 100 ntBASIC3.45□□□□□ -1.86
SNX9Q9Y5X1 RNU2-8P-201ENST00000410727 190 ntBASIC3.45□□□□□ -1.86
SNX9Q9Y5X1 RNU4-47P-201ENST00000410876 114 ntBASIC3.45□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 91.7 ms