Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC4□□□□□ -1.77
PCDHGA9Q9Y5G4 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4□□□□□ -1.77
PCDHGA9Q9Y5G4 RNU4-89P-201ENST00000607443 133 ntBASIC4□□□□□ -1.77
PCDHGA9Q9Y5G4 MIR6867-201ENST00000610636 67 ntBASIC4□□□□□ -1.77
PCDHGA9Q9Y5G4 AC104260.1-201ENST00000616660 539 ntBASIC4□□□□□ -1.77
PCDHGA9Q9Y5G4 AC006133.1-201ENST00000617106 264 ntBASIC4□□□□□ -1.77
PCDHGA9Q9Y5G4 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC4□□□□□ -1.77
PCDHGA9Q9Y5G4 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
PCDHGA9Q9Y5G4 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC4□□□□□ -1.77
PCDHGA9Q9Y5G4 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
PCDHGA9Q9Y5G4 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
PCDHGA9Q9Y5G4 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
PCDHGA9Q9Y5G4 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC3.99□□□□□ -1.77
PCDHGA9Q9Y5G4 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
PCDHGA9Q9Y5G4 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
PCDHGA9Q9Y5G4 RNU6-845P-201ENST00000362578 103 ntBASIC3.99□□□□□ -1.77
PCDHGA9Q9Y5G4 RNU1-14P-201ENST00000362759 152 ntBASIC3.99□□□□□ -1.77
PCDHGA9Q9Y5G4 Y_RNA.166-201ENST00000363730 102 ntBASIC3.99□□□□□ -1.77
PCDHGA9Q9Y5G4 RNU6-395P-201ENST00000365662 106 ntBASIC3.99□□□□□ -1.77
PCDHGA9Q9Y5G4 RNU1-44P-201ENST00000384453 163 ntBASIC3.99□□□□□ -1.77
PCDHGA9Q9Y5G4 MIR513A2-201ENST00000385249 127 ntBASIC3.99□□□□□ -1.77
PCDHGA9Q9Y5G4 SNORD70.1-201ENST00000391007 85 ntBASIC3.99□□□□□ -1.77
PCDHGA9Q9Y5G4 UBE2V1P2-201ENST00000397758 440 ntBASIC3.99□□□□□ -1.77
PCDHGA9Q9Y5G4 RN7SKP32-201ENST00000410167 303 ntBASIC3.99□□□□□ -1.77
PCDHGA9Q9Y5G4 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.99□□□□□ -1.77
PCDHGA9Q9Y5G4 NCOR1P3-201ENST00000420479 303 ntBASIC3.99□□□□□ -1.77
PCDHGA9Q9Y5G4 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC3.99□□□□□ -1.77
PCDHGA9Q9Y5G4 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC3.99□□□□□ -1.77
PCDHGA9Q9Y5G4 MTCO3P46-201ENST00000425787 232 ntBASIC3.99□□□□□ -1.77
PCDHGA9Q9Y5G4 AL157831.1-201ENST00000426134 473 ntBASIC3.99□□□□□ -1.77
PCDHGA9Q9Y5G4 AL592045.1-201ENST00000429867 352 ntBASIC3.99□□□□□ -1.77
PCDHGA9Q9Y5G4 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
PCDHGA9Q9Y5G4 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC3.99□□□□□ -1.77
PCDHGA9Q9Y5G4 HLA-N-201ENST00000437516 135 ntBASIC3.99□□□□□ -1.77
PCDHGA9Q9Y5G4 USP9YP8-201ENST00000441913 500 ntBASIC3.99□□□□□ -1.77
PCDHGA9Q9Y5G4 PIGFP3-201ENST00000441918 722 ntBASIC3.99□□□□□ -1.77
PCDHGA9Q9Y5G4 RPS15AP27-201ENST00000449183 343 ntBASIC3.99□□□□□ -1.77
PCDHGA9Q9Y5G4 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC3.99□□□□□ -1.77
PCDHGA9Q9Y5G4 RPL21P41-201ENST00000459863 264 ntBASIC3.99□□□□□ -1.77
PCDHGA9Q9Y5G4 HMGN1P12-201ENST00000499125 195 ntBASIC3.99□□□□□ -1.77
PCDHGA9Q9Y5G4 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.99□□□□□ -1.77
PCDHGA9Q9Y5G4 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC3.99□□□□□ -1.77
PCDHGA9Q9Y5G4 AC099522.1-202ENST00000514718 367 ntBASIC3.99□□□□□ -1.77
PCDHGA9Q9Y5G4 RNA5SP471-201ENST00000516971 106 ntBASIC3.99□□□□□ -1.77
PCDHGA9Q9Y5G4 RNU6-1314P-201ENST00000517139 104 ntBASIC3.99□□□□□ -1.77
PCDHGA9Q9Y5G4 RNU6-1315P-201ENST00000517187 99 ntBASIC3.99□□□□□ -1.77
PCDHGA9Q9Y5G4 RN7SKP256-201ENST00000517201 314 ntBASIC3.99□□□□□ -1.77
PCDHGA9Q9Y5G4 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC3.99□□□□□ -1.77
PCDHGA9Q9Y5G4 OR11H5P-201ENST00000554039 926 ntBASIC3.99□□□□□ -1.77
PCDHGA9Q9Y5G4 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC3.99□□□□□ -1.77
PCDHGA9Q9Y5G4 MTCO3P23-201ENST00000561363 289 ntBASIC3.99□□□□□ -1.77
PCDHGA9Q9Y5G4 MIR3158-1-201ENST00000583596 81 ntBASIC3.99□□□□□ -1.77
PCDHGA9Q9Y5G4 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC3.99□□□□□ -1.77
PCDHGA9Q9Y5G4 MIR548AC-201ENST00000585049 88 ntBASIC3.99□□□□□ -1.77
PCDHGA9Q9Y5G4 AC010201.1-201ENST00000605051 540 ntBASIC3.99□□□□□ -1.77
PCDHGA9Q9Y5G4 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.99□□□□□ -1.77
PCDHGA9Q9Y5G4 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC3.99□□□□□ -1.77
PCDHGA9Q9Y5G4 AL445363.3-201ENST00000623080 671 ntBASIC3.99□□□□□ -1.77
PCDHGA9Q9Y5G4 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.99□□□□□ -1.77
PCDHGA9Q9Y5G4 Z99571.1-201ENST00000636677 394 ntBASIC3.99□□□□□ -1.77
PCDHGA9Q9Y5G4 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
PCDHGA9Q9Y5G4 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC3.99□□□□□ -1.77
PCDHGA9Q9Y5G4 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
PCDHGA9Q9Y5G4 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC3.99□□□□□ -1.77
PCDHGA9Q9Y5G4 AL049641.1-201ENST00000441055 1948 ntBASIC3.99□□□□□ -1.77
PCDHGA9Q9Y5G4 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
PCDHGA9Q9Y5G4 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
PCDHGA9Q9Y5G4 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
PCDHGA9Q9Y5G4 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.98□□□□□ -1.77
PCDHGA9Q9Y5G4 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
PCDHGA9Q9Y5G4 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC3.98□□□□□ -1.77
PCDHGA9Q9Y5G4 SNORD74.4-201ENST00000364129 80 ntBASIC3.98□□□□□ -1.77
PCDHGA9Q9Y5G4 RNA5SP175-201ENST00000364275 119 ntBASIC3.98□□□□□ -1.77
PCDHGA9Q9Y5G4 U3.12-201ENST00000364498 214 ntBASIC3.98□□□□□ -1.77
PCDHGA9Q9Y5G4 RNU6-715P-201ENST00000365204 103 ntBASIC3.98□□□□□ -1.77
PCDHGA9Q9Y5G4 Y_RNA.373-201ENST00000365600 103 ntBASIC3.98□□□□□ -1.77
PCDHGA9Q9Y5G4 RNU6-1013P-201ENST00000384180 107 ntBASIC3.98□□□□□ -1.77
PCDHGA9Q9Y5G4 POLHP1-201ENST00000411806 470 ntBASIC3.98□□□□□ -1.77
PCDHGA9Q9Y5G4 AC063979.1-201ENST00000415539 377 ntBASIC3.98□□□□□ -1.77
PCDHGA9Q9Y5G4 AC092047.1-201ENST00000424997 240 ntBASIC3.98□□□□□ -1.77
PCDHGA9Q9Y5G4 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC3.98□□□□□ -1.77
PCDHGA9Q9Y5G4 AL356535.1-201ENST00000440335 398 ntBASIC3.98□□□□□ -1.77
PCDHGA9Q9Y5G4 RPS24P13-201ENST00000442520 397 ntBASIC3.98□□□□□ -1.77
PCDHGA9Q9Y5G4 AL162151.2-201ENST00000448875 158 ntBASIC3.98□□□□□ -1.77
PCDHGA9Q9Y5G4 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
PCDHGA9Q9Y5G4 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
PCDHGA9Q9Y5G4 FABP5P15-201ENST00000453566 214 ntBASIC3.98□□□□□ -1.77
PCDHGA9Q9Y5G4 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC3.98□□□□□ -1.77
PCDHGA9Q9Y5G4 MTND1P11-201ENST00000456661 876 ntBASIC3.98□□□□□ -1.77
PCDHGA9Q9Y5G4 RNU7-167P-201ENST00000459160 62 ntBASIC3.98□□□□□ -1.77
PCDHGA9Q9Y5G4 AC034236.1-201ENST00000469891 373 ntBASIC3.98□□□□□ -1.77
PCDHGA9Q9Y5G4 OARD1-209ENST00000471367 401 ntTSL 2 BASIC3.98□□□□□ -1.77
PCDHGA9Q9Y5G4 KC877373.1-201ENST00000479066 408 ntBASIC3.98□□□□□ -1.77
PCDHGA9Q9Y5G4 TRBVA-201ENST00000498804 316 ntBASIC3.98□□□□□ -1.77
PCDHGA9Q9Y5G4 HIGD1AP13-201ENST00000509878 289 ntBASIC3.98□□□□□ -1.77
PCDHGA9Q9Y5G4 AC006499.6-201ENST00000511169 607 ntBASIC3.98□□□□□ -1.77
PCDHGA9Q9Y5G4 RN7SKP13-201ENST00000515933 244 ntBASIC3.98□□□□□ -1.77
PCDHGA9Q9Y5G4 RNU6-189P-201ENST00000516120 101 ntBASIC3.98□□□□□ -1.77
PCDHGA9Q9Y5G4 RNA5SP73-201ENST00000516744 108 ntBASIC3.98□□□□□ -1.77
PCDHGA9Q9Y5G4 AC023632.4-201ENST00000517783 191 ntBASIC3.98□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 81.1 ms