Protein–RNA interactions for Protein: Q9Y548

YIPF1, Protein YIPF1, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF1Q9Y548 AC073648.5-201ENST00000603502 305 ntBASIC3.25□□□□□ -1.89
YIPF1Q9Y548 AL136363.2-201ENST00000604173 851 ntBASIC3.25□□□□□ -1.89
YIPF1Q9Y548 AL161734.1-201ENST00000609720 557 ntBASIC3.25□□□□□ -1.89
YIPF1Q9Y548 AC072046.2-201ENST00000618366 268 ntBASIC3.25□□□□□ -1.89
YIPF1Q9Y548 AC068880.5-201ENST00000624331 290 ntBASIC3.25□□□□□ -1.89
YIPF1Q9Y548 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC3.25□□□□□ -1.89
YIPF1Q9Y548 AL137790.1-201ENST00000634283 177 ntBASIC3.25□□□□□ -1.89
YIPF1Q9Y548 AC005832.2-201ENST00000538921 1430 ntBASIC3.25□□□□□ -1.89
YIPF1Q9Y548 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC3.25□□□□□ -1.89
YIPF1Q9Y548 AC000403.1-201ENST00000613696 3585 ntBASIC3.25□□□□□ -1.89
YIPF1Q9Y548 AL365361.1-201ENST00000566942 3481 ntBASIC3.24□□□□□ -1.89
YIPF1Q9Y548 AF117829.1-206ENST00000621883 3802 ntBASIC3.24□□□□□ -1.89
YIPF1Q9Y548 AC091152.2-201ENST00000591628 2569 ntBASIC3.24□□□□□ -1.89
YIPF1Q9Y548 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC3.24□□□□□ -1.89
YIPF1Q9Y548 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.24□□□□□ -1.89
YIPF1Q9Y548 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
YIPF1Q9Y548 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC3.24□□□□□ -1.89
YIPF1Q9Y548 MIR22-201ENST00000362190 85 ntBASIC3.24□□□□□ -1.89
YIPF1Q9Y548 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
YIPF1Q9Y548 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
YIPF1Q9Y548 RNU1-39P-201ENST00000383897 165 ntBASIC3.24□□□□□ -1.89
YIPF1Q9Y548 Y_RNA.582-201ENST00000391023 95 ntBASIC3.24□□□□□ -1.89
YIPF1Q9Y548 RNU2-62P-201ENST00000410868 191 ntBASIC3.24□□□□□ -1.89
YIPF1Q9Y548 RPL21P24-201ENST00000413752 448 ntBASIC3.24□□□□□ -1.89
YIPF1Q9Y548 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC3.24□□□□□ -1.89
YIPF1Q9Y548 MTCO1P21-201ENST00000416634 589 ntBASIC3.24□□□□□ -1.89
YIPF1Q9Y548 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC3.24□□□□□ -1.89
YIPF1Q9Y548 RPL31P35-201ENST00000431058 377 ntBASIC3.24□□□□□ -1.89
YIPF1Q9Y548 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC3.24□□□□□ -1.89
YIPF1Q9Y548 AC005094.1-201ENST00000440420 368 ntBASIC3.24□□□□□ -1.89
YIPF1Q9Y548 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC3.24□□□□□ -1.89
YIPF1Q9Y548 AL662791.1-201ENST00000441992 928 ntBASIC3.24□□□□□ -1.89
YIPF1Q9Y548 MTND1P12-201ENST00000455231 147 ntBASIC3.24□□□□□ -1.89
YIPF1Q9Y548 RBM43P1-201ENST00000476891 1081 ntBASIC3.24□□□□□ -1.89
YIPF1Q9Y548 RPS4XP22-201ENST00000480755 780 ntBASIC3.24□□□□□ -1.89
YIPF1Q9Y548 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC3.24□□□□□ -1.89
YIPF1Q9Y548 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC3.24□□□□□ -1.89
YIPF1Q9Y548 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.24□□□□□ -1.89
YIPF1Q9Y548 SCARNA20.6-201ENST00000517251 106 ntBASIC3.24□□□□□ -1.89
YIPF1Q9Y548 MTCO2P4-201ENST00000517968 247 ntBASIC3.24□□□□□ -1.89
YIPF1Q9Y548 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC3.24□□□□□ -1.89
YIPF1Q9Y548 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC3.24□□□□□ -1.89
YIPF1Q9Y548 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.24□□□□□ -1.89
YIPF1Q9Y548 AL391156.1-201ENST00000554965 554 ntBASIC3.24□□□□□ -1.89
YIPF1Q9Y548 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC3.24□□□□□ -1.89
YIPF1Q9Y548 MIR3167-201ENST00000579623 85 ntBASIC3.24□□□□□ -1.89
YIPF1Q9Y548 MIR4425-201ENST00000580572 84 ntBASIC3.24□□□□□ -1.89
YIPF1Q9Y548 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC3.24□□□□□ -1.89
YIPF1Q9Y548 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC3.24□□□□□ -1.89
YIPF1Q9Y548 MIR4293-201ENST00000584305 78 ntBASIC3.24□□□□□ -1.89
YIPF1Q9Y548 NRBF2P1-201ENST00000587407 859 ntBASIC3.24□□□□□ -1.89
YIPF1Q9Y548 AC068790.6-201ENST00000602558 258 ntBASIC3.24□□□□□ -1.89
YIPF1Q9Y548 AC008277.2-201ENST00000605196 797 ntBASIC3.24□□□□□ -1.89
YIPF1Q9Y548 AC103710.2-201ENST00000609912 942 ntBASIC3.24□□□□□ -1.89
YIPF1Q9Y548 AC122108.2-201ENST00000611946 526 ntBASIC3.24□□□□□ -1.89
YIPF1Q9Y548 AC013476.2-201ENST00000614456 459 ntBASIC3.24□□□□□ -1.89
YIPF1Q9Y548 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC3.24□□□□□ -1.89
YIPF1Q9Y548 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC3.24□□□□□ -1.89
YIPF1Q9Y548 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
YIPF1Q9Y548 AC092326.2-201ENST00000624772 1561 ntBASIC3.24□□□□□ -1.89
YIPF1Q9Y548 AC138915.3-201ENST00000562908 1389 ntBASIC3.24□□□□□ -1.89
YIPF1Q9Y548 AL021368.2-201ENST00000606125 5352 ntBASIC3.24□□□□□ -1.89
YIPF1Q9Y548 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.23□□□□□ -1.89
YIPF1Q9Y548 AL353746.1-201ENST00000566293 6881 ntBASIC3.23□□□□□ -1.89
YIPF1Q9Y548 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
YIPF1Q9Y548 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
YIPF1Q9Y548 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
YIPF1Q9Y548 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.23□□□□□ -1.89
YIPF1Q9Y548 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
YIPF1Q9Y548 RNU6-259P-201ENST00000383999 107 ntBASIC3.23□□□□□ -1.89
YIPF1Q9Y548 RNU5A-6P-201ENST00000384136 116 ntBASIC3.23□□□□□ -1.89
YIPF1Q9Y548 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.23□□□□□ -1.89
YIPF1Q9Y548 AC093156.1-201ENST00000440382 670 ntBASIC3.23□□□□□ -1.89
YIPF1Q9Y548 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.23□□□□□ -1.89
YIPF1Q9Y548 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC3.23□□□□□ -1.89
YIPF1Q9Y548 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC3.23□□□□□ -1.89
YIPF1Q9Y548 OFD1P4Y-201ENST00000455273 1179 ntBASIC3.23□□□□□ -1.89
YIPF1Q9Y548 HMGN1P18-201ENST00000457642 277 ntBASIC3.23□□□□□ -1.89
YIPF1Q9Y548 AC010631.1-201ENST00000474150 156 ntBASIC3.23□□□□□ -1.89
YIPF1Q9Y548 AL049830.2-201ENST00000480072 201 ntBASIC3.23□□□□□ -1.89
YIPF1Q9Y548 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
YIPF1Q9Y548 RPL37P25-201ENST00000507308 276 ntBASIC3.23□□□□□ -1.89
YIPF1Q9Y548 HMGB3P15-201ENST00000507326 574 ntBASIC3.23□□□□□ -1.89
YIPF1Q9Y548 Vault.3-201ENST00000516676 95 ntBASIC3.23□□□□□ -1.89
YIPF1Q9Y548 RN7SKP60-201ENST00000516985 239 ntBASIC3.23□□□□□ -1.89
YIPF1Q9Y548 RNU6-1220P-201ENST00000517126 108 ntBASIC3.23□□□□□ -1.89
YIPF1Q9Y548 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC3.23□□□□□ -1.89
YIPF1Q9Y548 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC3.23□□□□□ -1.89
YIPF1Q9Y548 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC3.23□□□□□ -1.89
YIPF1Q9Y548 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.23□□□□□ -1.89
YIPF1Q9Y548 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC3.23□□□□□ -1.89
YIPF1Q9Y548 AC116096.1-201ENST00000566804 2314 ntBASIC3.23□□□□□ -1.89
YIPF1Q9Y548 AC005951.1-201ENST00000576706 485 ntBASIC3.23□□□□□ -1.89
YIPF1Q9Y548 BDH2P1-201ENST00000602288 736 ntBASIC3.23□□□□□ -1.89
YIPF1Q9Y548 MIR98-201ENST00000606724 119 ntBASIC3.23□□□□□ -1.89
YIPF1Q9Y548 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.23□□□□□ -1.89
YIPF1Q9Y548 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.23□□□□□ -1.89
YIPF1Q9Y548 MIR7106-201ENST00000612419 65 ntBASIC3.23□□□□□ -1.89
YIPF1Q9Y548 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
YIPF1Q9Y548 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 119.4 ms