Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.16□□□□□ -2.06
RHBDD3Q9Y3P4 Y_RNA.245-201ENST00000364493 95 ntBASIC2.16□□□□□ -2.06
RHBDD3Q9Y3P4 MIR144-201ENST00000384886 86 ntBASIC2.16□□□□□ -2.06
RHBDD3Q9Y3P4 RPA3-203ENST00000401447 414 ntTSL 3 BASIC2.16□□□□□ -2.06
RHBDD3Q9Y3P4 AL162578.1-201ENST00000406202 378 ntBASIC2.16□□□□□ -2.06
RHBDD3Q9Y3P4 U3.37-201ENST00000408528 213 ntBASIC2.16□□□□□ -2.06
RHBDD3Q9Y3P4 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.16□□□□□ -2.06
RHBDD3Q9Y3P4 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC2.16□□□□□ -2.06
RHBDD3Q9Y3P4 AC019097.1-201ENST00000424783 735 ntBASIC2.16□□□□□ -2.06
RHBDD3Q9Y3P4 ELOCP14-201ENST00000428070 331 ntBASIC2.16□□□□□ -2.06
RHBDD3Q9Y3P4 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC2.16□□□□□ -2.06
RHBDD3Q9Y3P4 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC2.16□□□□□ -2.06
RHBDD3Q9Y3P4 ELOCP7-201ENST00000439968 331 ntBASIC2.16□□□□□ -2.06
RHBDD3Q9Y3P4 AC016691.1-201ENST00000441321 413 ntBASIC2.16□□□□□ -2.06
RHBDD3Q9Y3P4 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC2.16□□□□□ -2.06
RHBDD3Q9Y3P4 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC2.16□□□□□ -2.06
RHBDD3Q9Y3P4 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.16□□□□□ -2.06
RHBDD3Q9Y3P4 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC2.16□□□□□ -2.06
RHBDD3Q9Y3P4 LTV1P1-201ENST00000510683 1237 ntBASIC2.16□□□□□ -2.06
RHBDD3Q9Y3P4 AC024589.1-201ENST00000512207 263 ntBASIC2.16□□□□□ -2.06
RHBDD3Q9Y3P4 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC2.16□□□□□ -2.06
RHBDD3Q9Y3P4 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC2.16□□□□□ -2.06
RHBDD3Q9Y3P4 MIR892C-201ENST00000516410 77 ntBASIC2.16□□□□□ -2.06
RHBDD3Q9Y3P4 SNORA31.11-201ENST00000516528 139 ntBASIC2.16□□□□□ -2.06
RHBDD3Q9Y3P4 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC2.16□□□□□ -2.06
RHBDD3Q9Y3P4 AP003467.2-201ENST00000520175 319 ntBASIC2.16□□□□□ -2.06
RHBDD3Q9Y3P4 DEFB131D-201ENST00000526803 184 ntBASIC2.16□□□□□ -2.06
RHBDD3Q9Y3P4 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC2.16□□□□□ -2.06
RHBDD3Q9Y3P4 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC2.16□□□□□ -2.06
RHBDD3Q9Y3P4 AL132657.2-201ENST00000564417 358 ntBASIC2.16□□□□□ -2.06
RHBDD3Q9Y3P4 AF038458.1-201ENST00000588406 262 ntBASIC2.16□□□□□ -2.06
RHBDD3Q9Y3P4 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC2.16□□□□□ -2.06
RHBDD3Q9Y3P4 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC2.16□□□□□ -2.06
RHBDD3Q9Y3P4 AL645944.1-201ENST00000603857 493 ntBASIC2.16□□□□□ -2.06
RHBDD3Q9Y3P4 AL355598.1-201ENST00000604169 202 ntBASIC2.16□□□□□ -2.06
RHBDD3Q9Y3P4 SNORD14A-201ENST00000606526 91 ntBASIC2.16□□□□□ -2.06
RHBDD3Q9Y3P4 OR2AS2P-201ENST00000606902 342 ntBASIC2.16□□□□□ -2.06
RHBDD3Q9Y3P4 AC069294.1-201ENST00000608397 350 ntBASIC2.16□□□□□ -2.06
RHBDD3Q9Y3P4 AC009237.15-201ENST00000610252 501 ntBASIC2.16□□□□□ -2.06
RHBDD3Q9Y3P4 uc_338.14-201ENST00000613162 166 ntBASIC2.16□□□□□ -2.06
RHBDD3Q9Y3P4 AL512427.1-201ENST00000618593 349 ntBASIC2.16□□□□□ -2.06
RHBDD3Q9Y3P4 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC2.16□□□□□ -2.06
RHBDD3Q9Y3P4 U2.21-201ENST00000637295 81 ntBASIC2.16□□□□□ -2.06
RHBDD3Q9Y3P4 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.16□□□□□ -2.06
RHBDD3Q9Y3P4 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.16□□□□□ -2.06
RHBDD3Q9Y3P4 SLC10A5P1-201ENST00000379063 1306 ntBASIC2.16□□□□□ -2.06
RHBDD3Q9Y3P4 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.06
RHBDD3Q9Y3P4 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.06
RHBDD3Q9Y3P4 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.15□□□□□ -2.06
RHBDD3Q9Y3P4 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC2.15□□□□□ -2.07
RHBDD3Q9Y3P4 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
RHBDD3Q9Y3P4 RNU1-73P-201ENST00000383971 164 ntBASIC2.15□□□□□ -2.07
RHBDD3Q9Y3P4 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC2.15□□□□□ -2.07
RHBDD3Q9Y3P4 U6atac.2-201ENST00000408644 118 ntBASIC2.15□□□□□ -2.07
RHBDD3Q9Y3P4 CYCSP48-201ENST00000417124 323 ntBASIC2.15□□□□□ -2.07
RHBDD3Q9Y3P4 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC2.15□□□□□ -2.07
RHBDD3Q9Y3P4 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC2.15□□□□□ -2.07
RHBDD3Q9Y3P4 NANOGP2-201ENST00000435391 727 ntBASIC2.15□□□□□ -2.07
RHBDD3Q9Y3P4 COX7BP2-201ENST00000437976 242 ntBASIC2.15□□□□□ -2.07
RHBDD3Q9Y3P4 SNRPEP7-201ENST00000438350 220 ntBASIC2.15□□□□□ -2.07
RHBDD3Q9Y3P4 AL831737.1-201ENST00000441288 271 ntBASIC2.15□□□□□ -2.07
RHBDD3Q9Y3P4 MTCO3P45-201ENST00000443036 613 ntBASIC2.15□□□□□ -2.07
RHBDD3Q9Y3P4 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
RHBDD3Q9Y3P4 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC2.15□□□□□ -2.07
RHBDD3Q9Y3P4 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.15□□□□□ -2.07
RHBDD3Q9Y3P4 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC2.15□□□□□ -2.07
RHBDD3Q9Y3P4 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC2.15□□□□□ -2.07
RHBDD3Q9Y3P4 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC2.15□□□□□ -2.07
RHBDD3Q9Y3P4 MTND5P13-201ENST00000513046 1079 ntBASIC2.15□□□□□ -2.07
RHBDD3Q9Y3P4 RNA5SP356-201ENST00000515972 94 ntBASIC2.15□□□□□ -2.07
RHBDD3Q9Y3P4 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC2.15□□□□□ -2.07
RHBDD3Q9Y3P4 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC2.15□□□□□ -2.07
RHBDD3Q9Y3P4 AC007115.1-201ENST00000546853 234 ntBASIC2.15□□□□□ -2.07
RHBDD3Q9Y3P4 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC2.15□□□□□ -2.07
RHBDD3Q9Y3P4 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC2.15□□□□□ -2.07
RHBDD3Q9Y3P4 AC024619.4-201ENST00000580924 316 ntBASIC2.15□□□□□ -2.07
RHBDD3Q9Y3P4 AC008121.1-201ENST00000603244 268 ntBASIC2.15□□□□□ -2.07
RHBDD3Q9Y3P4 AL450336.1-201ENST00000605180 586 ntBASIC2.15□□□□□ -2.07
RHBDD3Q9Y3P4 AC004805.2-201ENST00000605382 482 ntBASIC2.15□□□□□ -2.07
RHBDD3Q9Y3P4 MIR6840-201ENST00000611937 71 ntBASIC2.15□□□□□ -2.07
RHBDD3Q9Y3P4 RNU6-1192P-201ENST00000612197 107 ntBASIC2.15□□□□□ -2.07
RHBDD3Q9Y3P4 RNU6-489P-201ENST00000618289 107 ntBASIC2.15□□□□□ -2.07
RHBDD3Q9Y3P4 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC2.15□□□□□ -2.07
RHBDD3Q9Y3P4 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC2.15□□□□□ -2.07
RHBDD3Q9Y3P4 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.15□□□□□ -2.07
RHBDD3Q9Y3P4 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.15□□□□□ -2.07
RHBDD3Q9Y3P4 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.15□□□□□ -2.07
RHBDD3Q9Y3P4 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC2.14□□□□□ -2.07
RHBDD3Q9Y3P4 PCF11-AS1-201ENST00000602322 1516 ntBASIC2.14□□□□□ -2.07
RHBDD3Q9Y3P4 AC062016.1-201ENST00000355719 319 ntBASIC2.14□□□□□ -2.07
RHBDD3Q9Y3P4 MIR21-201ENST00000362134 72 ntBASIC2.14□□□□□ -2.07
RHBDD3Q9Y3P4 RNU6-778P-201ENST00000363269 103 ntBASIC2.14□□□□□ -2.07
RHBDD3Q9Y3P4 MIR196B-201ENST00000384852 84 ntBASIC2.14□□□□□ -2.07
RHBDD3Q9Y3P4 MIR27B-201ENST00000385129 97 ntBASIC2.14□□□□□ -2.07
RHBDD3Q9Y3P4 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.14□□□□□ -2.07
RHBDD3Q9Y3P4 MTCO2P17-201ENST00000424336 677 ntBASIC2.14□□□□□ -2.07
RHBDD3Q9Y3P4 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC2.14□□□□□ -2.07
RHBDD3Q9Y3P4 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
RHBDD3Q9Y3P4 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC2.14□□□□□ -2.07
RHBDD3Q9Y3P4 AC108938.1-201ENST00000451204 136 ntBASIC2.14□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 131 ms