Protein–RNA interactions for Protein: Q9UKS6

PACSIN3, Protein kinase C and casein kinase substrate in neurons protein 3, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3Q9UKS6 AC026726.1-201ENST00000512859 601 ntBASIC3.91□□□□□ -1.78
PACSIN3Q9UKS6 AC104057.1-201ENST00000515547 497 ntBASIC3.91□□□□□ -1.78
PACSIN3Q9UKS6 SNORD116-26-201ENST00000516006 96 ntBASIC3.91□□□□□ -1.78
PACSIN3Q9UKS6 RNU6-764P-201ENST00000516396 105 ntBASIC3.91□□□□□ -1.78
PACSIN3Q9UKS6 RNA5SP519-201ENST00000516480 119 ntBASIC3.91□□□□□ -1.78
PACSIN3Q9UKS6 RNU6-256P-201ENST00000516747 97 ntBASIC3.91□□□□□ -1.78
PACSIN3Q9UKS6 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC3.91□□□□□ -1.78
PACSIN3Q9UKS6 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
PACSIN3Q9UKS6 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
PACSIN3Q9UKS6 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC3.91□□□□□ -1.78
PACSIN3Q9UKS6 MIR4512-201ENST00000583257 77 ntBASIC3.91□□□□□ -1.78
PACSIN3Q9UKS6 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.91□□□□□ -1.78
PACSIN3Q9UKS6 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.91□□□□□ -1.78
PACSIN3Q9UKS6 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC3.91□□□□□ -1.78
PACSIN3Q9UKS6 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
PACSIN3Q9UKS6 uc_338.11-201ENST00000619132 160 ntBASIC3.91□□□□□ -1.78
PACSIN3Q9UKS6 AC022418.1-201ENST00000624118 445 ntBASIC3.91□□□□□ -1.78
PACSIN3Q9UKS6 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
PACSIN3Q9UKS6 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
PACSIN3Q9UKS6 AL049641.1-201ENST00000441055 1948 ntBASIC3.91□□□□□ -1.78
PACSIN3Q9UKS6 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
PACSIN3Q9UKS6 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
PACSIN3Q9UKS6 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
PACSIN3Q9UKS6 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC3.91□□□□□ -1.78
PACSIN3Q9UKS6 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC3.9□□□□□ -1.78
PACSIN3Q9UKS6 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
PACSIN3Q9UKS6 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC3.9□□□□□ -1.78
PACSIN3Q9UKS6 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
PACSIN3Q9UKS6 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
PACSIN3Q9UKS6 RNU6-1115P-201ENST00000362490 106 ntBASIC3.9□□□□□ -1.79
PACSIN3Q9UKS6 RNU6-188P-201ENST00000364207 107 ntBASIC3.9□□□□□ -1.79
PACSIN3Q9UKS6 SNORD115-7-201ENST00000365306 82 ntBASIC3.9□□□□□ -1.79
PACSIN3Q9UKS6 RNA5SP366-201ENST00000365454 123 ntBASIC3.9□□□□□ -1.79
PACSIN3Q9UKS6 RNU6-1032P-201ENST00000384100 107 ntBASIC3.9□□□□□ -1.79
PACSIN3Q9UKS6 AL139397.2-201ENST00000404529 772 ntBASIC3.9□□□□□ -1.79
PACSIN3Q9UKS6 SNORA11F-201ENST00000408237 128 ntBASIC3.9□□□□□ -1.79
PACSIN3Q9UKS6 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC3.9□□□□□ -1.79
PACSIN3Q9UKS6 RAC1P3-201ENST00000416129 580 ntBASIC3.9□□□□□ -1.79
PACSIN3Q9UKS6 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC3.9□□□□□ -1.79
PACSIN3Q9UKS6 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
PACSIN3Q9UKS6 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC3.9□□□□□ -1.79
PACSIN3Q9UKS6 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC3.9□□□□□ -1.79
PACSIN3Q9UKS6 NUTF2P3-201ENST00000448540 384 ntBASIC3.9□□□□□ -1.79
PACSIN3Q9UKS6 GAS5-223ENST00000452197 483 ntTSL 3 BASIC3.9□□□□□ -1.79
PACSIN3Q9UKS6 RPL12P25-201ENST00000455592 494 ntBASIC3.9□□□□□ -1.79
PACSIN3Q9UKS6 AC108059.3-201ENST00000456388 214 ntBASIC3.9□□□□□ -1.79
PACSIN3Q9UKS6 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC3.9□□□□□ -1.79
PACSIN3Q9UKS6 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC3.9□□□□□ -1.79
PACSIN3Q9UKS6 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC3.9□□□□□ -1.79
PACSIN3Q9UKS6 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC3.9□□□□□ -1.79
PACSIN3Q9UKS6 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC3.9□□□□□ -1.79
PACSIN3Q9UKS6 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC3.9□□□□□ -1.79
PACSIN3Q9UKS6 SNORA31.9-201ENST00000516429 84 ntBASIC3.9□□□□□ -1.79
PACSIN3Q9UKS6 RNU7-51P-201ENST00000516560 62 ntBASIC3.9□□□□□ -1.79
PACSIN3Q9UKS6 RNU7-143P-201ENST00000516781 65 ntBASIC3.9□□□□□ -1.79
PACSIN3Q9UKS6 MRPL49P2-201ENST00000521066 465 ntBASIC3.9□□□□□ -1.79
PACSIN3Q9UKS6 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC3.9□□□□□ -1.79
PACSIN3Q9UKS6 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC3.9□□□□□ -1.79
PACSIN3Q9UKS6 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC3.9□□□□□ -1.79
PACSIN3Q9UKS6 AC010653.1-201ENST00000571108 881 ntBASIC3.9□□□□□ -1.79
PACSIN3Q9UKS6 AC138761.3-201ENST00000579993 334 ntBASIC3.9□□□□□ -1.79
PACSIN3Q9UKS6 AC024619.4-201ENST00000580924 316 ntBASIC3.9□□□□□ -1.79
PACSIN3Q9UKS6 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC3.9□□□□□ -1.79
PACSIN3Q9UKS6 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC3.9□□□□□ -1.79
PACSIN3Q9UKS6 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC3.9□□□□□ -1.79
PACSIN3Q9UKS6 AC092747.3-201ENST00000603769 301 ntBASIC3.9□□□□□ -1.79
PACSIN3Q9UKS6 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC3.9□□□□□ -1.79
PACSIN3Q9UKS6 AL157817.1-201ENST00000614264 790 ntBASIC3.9□□□□□ -1.79
PACSIN3Q9UKS6 AL445567.2-201ENST00000618935 498 ntBASIC3.9□□□□□ -1.79
PACSIN3Q9UKS6 MIR3653-201ENST00000625572 110 ntBASIC3.9□□□□□ -1.79
PACSIN3Q9UKS6 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
PACSIN3Q9UKS6 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.9□□□□□ -1.79
PACSIN3Q9UKS6 API5P2-201ENST00000397055 1498 ntBASIC3.9□□□□□ -1.79
PACSIN3Q9UKS6 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.9□□□□□ -1.79
PACSIN3Q9UKS6 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
PACSIN3Q9UKS6 ZNF807-201ENST00000328088 1707 ntBASIC3.9□□□□□ -1.79
PACSIN3Q9UKS6 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC3.9□□□□□ -1.79
PACSIN3Q9UKS6 MTND5P30-201ENST00000452896 1731 ntBASIC3.9□□□□□ -1.79
PACSIN3Q9UKS6 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
PACSIN3Q9UKS6 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
PACSIN3Q9UKS6 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.89□□□□□ -1.79
PACSIN3Q9UKS6 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.89□□□□□ -1.79
PACSIN3Q9UKS6 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
PACSIN3Q9UKS6 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC3.89□□□□□ -1.79
PACSIN3Q9UKS6 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC3.89□□□□□ -1.79
PACSIN3Q9UKS6 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC3.89□□□□□ -1.79
PACSIN3Q9UKS6 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC3.89□□□□□ -1.79
PACSIN3Q9UKS6 NCAPGP1-201ENST00000505112 1814 ntBASIC3.89□□□□□ -1.79
PACSIN3Q9UKS6 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
PACSIN3Q9UKS6 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
PACSIN3Q9UKS6 RNA5SP502-201ENST00000362694 119 ntBASIC3.89□□□□□ -1.79
PACSIN3Q9UKS6 RNU6-179P-201ENST00000363350 107 ntBASIC3.89□□□□□ -1.79
PACSIN3Q9UKS6 Y_RNA.149-201ENST00000363558 117 ntBASIC3.89□□□□□ -1.79
PACSIN3Q9UKS6 Y_RNA.188-201ENST00000363952 111 ntBASIC3.89□□□□□ -1.79
PACSIN3Q9UKS6 SNORA63.7-201ENST00000365579 123 ntBASIC3.89□□□□□ -1.79
PACSIN3Q9UKS6 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC3.89□□□□□ -1.79
PACSIN3Q9UKS6 Y_RNA.482-201ENST00000384377 111 ntBASIC3.89□□□□□ -1.79
PACSIN3Q9UKS6 SNORA24.1-201ENST00000384401 135 ntBASIC3.89□□□□□ -1.79
PACSIN3Q9UKS6 MIR708-201ENST00000390708 88 ntBASIC3.89□□□□□ -1.79
PACSIN3Q9UKS6 RNU6-278P-201ENST00000390945 109 ntBASIC3.89□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 90 ms